prot_Ecto-sp13_S_contig10815.731.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10815.731.1
Unique Nameprot_Ecto-sp13_S_contig10815.731.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length345
Homology
BLAST of mRNA_Ecto-sp13_S_contig10815.731.1 vs. uniprot
Match: D7FPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX9_ECTSI)

HSP 1 Score: 606 bits (1563), Expect = 7.870e-218
Identity = 317/345 (91.88%), Postives = 326/345 (94.49%), Query Frame = 0
Query:    1 MVELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYGMGVEGKARGVAALSAVLKRQDAANNRRIIAGICQLVIGTGLVCLTCFSWKLVGIMTTATVVAILEVALAVLLTIGVTGVLRMWAISNKVQRLRQKPSAEAPPDADVVELVAPRSGSDMGGKWEPDVRVPPTVATLREHMEGMSNIEKAVSSSPL-EDYQAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRSLLTTWLPPGPTAWWGNFVGDVAWTIEPITVFLAPYLVLRRAQPGKTKTS 344
            MVELWISLIRNAACVLKSLLPAEYT+MQPLMAFPFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEY MGVEGKARGVAALS VLKRQDAANNRRIIAGICQLVIGTGL+CLTCFSWKLVGIMTTAT VAILEVALAVLLTIGVTGVLRMWAISNKVQRL+QKP AEAPPDADVVELVAPRSGSDMGGKWEPDVRVPPTVATLR     +++  + +S   L +  QAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRSLLTTWLPPGPTAWWGNFVGDVAWTIEPITVFLAPYLVLRRAQP KTKTS
Sbjct:    1 MVELWISLIRNAACVLKSLLPAEYTMMQPLMAFPFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYDMGVEGKARGVAALSVVLKRQDAANNRRIIAGICQLVIGTGLICLTCFSWKLVGIMTTATAVAILEVALAVLLTIGVTGVLRMWAISNKVQRLQQKPPAEAPPDADVVELVAPRSGSDMGGKWEPDVRVPPTVATLRTWKACLAS--RRLSRVVLWKTNQAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRSLLTTWLPPGPTAWWGNFVGDVAWTIEPITVFLAPYLVLRRAQPSKTKTS 343          
BLAST of mRNA_Ecto-sp13_S_contig10815.731.1 vs. uniprot
Match: A0A6H5JMJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ7_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 8.910e-83
Identity = 133/137 (97.08%), Postives = 133/137 (97.08%), Query Frame = 0
Query:    1 MVELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYGMGVEGKARGVAALSAVLKRQDAANNRRIIAGICQLVIGTG 137
            M ELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLF SGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEY MGVEGKARGVAALS VLKRQDAANNRRIIAGICQLVIGTG
Sbjct:    1 MAELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFSSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYDMGVEGKARGVAALSVVLKRQDAANNRRIIAGICQLVIGTG 137          
BLAST of mRNA_Ecto-sp13_S_contig10815.731.1 vs. uniprot
Match: A0A835ZBH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBH9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.940e-28
Identity = 124/374 (33.16%), Postives = 159/374 (42.51%), Query Frame = 0
Query:    3 ELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRW------RNALAEYGMGVEGK----------------------ARGVAALSAVLKRQDAANNRRIIAGICQLVIGTGLVCLTCFSWKLVGIMTTATVVAILEVALAVLLTIGVTGVL---RMWAISNKVQRLRQKPSAEAPPDADVVELVAPRSGSDMGGKWEPDVRVPPTVATLREHMEGMSNIEKAVSSSPLEDYQAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQR---------SLLTTWLP--PGPTA--WWGNFVGDVAWTIEPITVFLAPYLV 332
            E+ I+L+RN ACV KSLLP    V +P     FP F         +  T L+  I  LQL  A + + KG     GG+        W         +   G G +GK                      A  +AA + +L+R+ AA  RR++ G  QL+I  G V L     K +        + I EVALA LL + +  +    R+ A +    RLR      AP D +V ELVAPR G       EP  RV PT A  R     +      V   P              A L+A L+ LNV AFVGY TIPL  F P+          SLL  W    PG  A  WWGN  GDVAW++EP  +  AP L+
Sbjct:    5 EVVIALLRNCACVAKSLLPHTSPVFEP-----FPGF---------KAITWLDAFIIALQLVAAVYYVQKGIVSTVGGLKDRANATAWLTVAGPEKGVDRTGSGADGKPEKKRKPSAADAAAEKDKAAQEAADMAAFAELLRRRKAAGIRRVLVGASQLIIAEGFVALALSGLKYMLFPRLVWSLTITEVALAYLLYVMLDEIRVARRLAAKARAAARLR----IAAPLDTEVAELVAPRIGQAPWALPEPP-RVAPTRAGARAAATALRAWRDGV---PRPRAAXXXXXXXXXAQLEAVLLLLNVVAFVGYATIPLTYFVPEDWANAAPAPLSLLVGWPLWWPGHEAASWWGNLAGDVAWSVEPALMLAAPLLI 356          
BLAST of mRNA_Ecto-sp13_S_contig10815.731.1 vs. uniprot
Match: A0A6S9FG41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FG41_HETAK)

HSP 1 Score: 110 bits (275), Expect = 7.730e-24
Identity = 113/363 (31.13%), Postives = 168/363 (46.28%), Query Frame = 0
Query:    6 ISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGA--------KGLAGGVVMAEYIVRWRNALAEYGMGVEGKARGVAALSAVLKRQDAANNRRIIAGICQLVIGTGLVCLTCFSWKLVGIMTTATVVAILEVALAVLLTIGVTGVLRMWAISNKVQ-----RLRQKPSAEAPPDADVVELVAPRSGSDM-------GGKWEPDVRVPPTVATLREHMEGMSNIEKAVS-------SSPLEDYQA--IGQAAK--KQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRSLLTTWLP---PGPT--AWWGNFVGDVAWTIEPITVFLAPYLV 332
            +SL+RNA CV KSL+  ++    P+M  PF       G  + E    +E +IG+LQL G  F LC GA        K +     + E +   R +  EY +           LS  L ++ AA  ++   GI +L IG G   L  +S+    ++     ++++EV+LAVLL  G  G+   W  S  VQ     R RQ P    P +A  V L   R            GG+         T A +R   + +++I+K +        +  LED++   + +A K   +AV  A++I LN+ A VGY  IPL  + P       +L    PG    AWWGN  GDVAWT+EP+++  AP L+
Sbjct:   10 VSLVRNALCVCKSLVAEDHWSRDPIMKAPF------FGGEEPEDVLIIEAVIGLLQLMGGVF-LCAGAVKKMLEARKEMTVAFSIQEEMDCTRLSWLEYVL-----------LSDSLDKEKAAKKQKYSEGIHELNIGVGFFFLCAWSFHSCSVVYLMLSLSLVEVSLAVLLWYGGKGIYAAWRNSQDVQLAYGRRRRQLPHRVNPGNARWVALKLHREADTRLDLAAARGGRER-------TAAEVRRVAKAITDIDKLLEDGAGIKWTKDLEDHRVEQLVEADKLVAEAVFTAWIIFLNIIAGVGYFFIPLTYYVPDEGTFAYYLWDLWPGHEFLAWWGNLAGDVAWTLEPLSLLAAPALL 347          
BLAST of mRNA_Ecto-sp13_S_contig10815.731.1 vs. uniprot
Match: A0A7S2MNU7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MNU7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.820e-13
Identity = 94/355 (26.48%), Postives = 138/355 (38.87%), Query Frame = 0
Query:    3 ELWISLIRNAACVLKSLLPAEYTVMQPLMAF--PFPLFWSGGGAGKLEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYGMGVEGKARGVAALSAVLKRQDAANNRRIIAGICQLVIGTGLVCLTCFS----------WKLVGIMTTATVVAILEVALAVLLTIGVTGVLRMWAISNKVQRLRQKPSAEAPPDADVVELVAPRSGSDMGGKWEPDVRVPPTVA---------TLREHMEGMSNIEKAVSSSPLEDYQAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRS----LLTTWLPPGPTAWWGNFVGDVAWTIEPITVFLAPYLV 332
            E  ++L+RN  CV+K L        +PL +   PFP              T LE  IG LQ+A   FNL  G   ++   V    +  W    A        K +  + ++  L    AA N R + GIC+L IG G + L   S          W LVG          +E AL VLL      + +    S       +K         +VV L+A     D   +  PD+  P   A          L+   E +++  K        + +A       +A  D  L+ LN+ AF+GY   P+  FFP       ++T W       ++GN +GD AWT+EP  +   P L+
Sbjct:    9 ETVVALLRNGLCVIKDL-DLGGIASKPLESTQNPFP------------GITPLEICIGALQVAAIFFNLIGGFNDISIVGVHRPVLRAWARVTAGR------KEKQPSLMAQQLNAAQAATNTRFVVGICKLFIGVGFIPLAMCSFQNVFLWYVNWGLVG----------MEAALLVLLGYMCGDIAKTGKKSRDALSFAKKMPDVTSAPLEVVALLA-----DAVNEPVPDMPWPAPPAGYLETAANQELKRFKESVASKLKDSKDEAKANLEAQAYGDSLRAWFDVLLLVLNLLAFIGYFIFPVTFFFPDEKWVAEMVTYWPGHEYCEYYGNLLGDAAWTVEPALLLFVPRLI 329          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10815.731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FPX9_ECTSI7.870e-21891.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMJ7_9PHAE8.910e-8397.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBH9_9STRA4.940e-2833.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9FG41_HETAK7.730e-2431.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2MNU7_9STRA4.820e-1326.48Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 307..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 288..306
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 334..344
NoneNo IPR availableTMHMMTMhelixcoord: 269..291
NoneNo IPR availableTMHMMTMhelixcoord: 125..145
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 311..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10815contigEcto-sp13_S_contig10815:259..4647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10815.731.1mRNA_Ecto-sp13_S_contig10815.731.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10815 2..5234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10815.731.1 ID=prot_Ecto-sp13_S_contig10815.731.1|Name=mRNA_Ecto-sp13_S_contig10815.731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp
MVELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFWSGGGAGKLEMF
TGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYGMGV
EGKARGVAALSAVLKRQDAANNRRIIAGICQLVIGTGLVCLTCFSWKLVG
IMTTATVVAILEVALAVLLTIGVTGVLRMWAISNKVQRLRQKPSAEAPPD
ADVVELVAPRSGSDMGGKWEPDVRVPPTVATLREHMEGMSNIEKAVSSSP
LEDYQAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRSLLTTW
LPPGPTAWWGNFVGDVAWTIEPITVFLAPYLVLRRAQPGKTKTS*
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