mRNA_Ecto-sp13_S_contig1075.682.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: D7G2N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2N4_ECTSI) HSP 1 Score: 322 bits (826), Expect = 2.620e-108 Identity = 176/193 (91.19%), Postives = 177/193 (91.71%), Query Frame = 3
Query: 78 MSGSTSNHQGSRRQDELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
MSGSTSNHQGSRRQDELTALKVRKLGQQEELAKEFNF LTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGEL VLTNKI RLQRDIDQ VEQDIQQA VASSTAAAA AQ A PPCSSLAEWFAAYGEPA SASSG+MTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR
Sbjct: 1 MSGSTSNHQGSRRQDELTALKVRKLGQQEELAKEFNFILTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELTVLTNKIARLQRDIDQ------VEQDIQQADVVASSTAAAAQAQPSARPPCSSLAEWFAAYGEPAPSASSGLMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 187
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A7S2UW48_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW48_9STRA) HSP 1 Score: 138 bits (347), Expect = 4.220e-36 Identity = 77/182 (42.31%), Postives = 113/182 (62.09%), Query Frame = 3
Query: 111 RRQDELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
++ ++L K KL QQ+ L+ EFN LTR+GGLN+ +RQ CKNLE A+A+A RPG EYY+ E RI+A +L +LTNKI ++QR++DQ ++ +I+Q H P ++L +WFA YG P + +G ++ FE S K+YGGT HHRAFK+Q+ +KKG + +
Sbjct: 21 KKLEQLYEQKASKLAQQKNLSDEFNEILTREGGLNEVSRQACKNLEAAVAVAQRPGYFEYYQAPAEVQRIIAADDLKLLTNKINQIQRELDQ------IDSEIEQLSKQ--------HYSQRNPPQVNNLGQWFAVYGTP-KPPPNGTLSVFEPSDKVYGGTQHHRAFKSQSRSLKKGTVLK 187
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A7S2SKE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKE1_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.170e-32 Identity = 75/182 (41.21%), Postives = 108/182 (59.34%), Query Frame = 3
Query: 120 DELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPPCS---SLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
D L A KV KL QQ+ + E N LTR+ GLND + +T +NLE A+ ++ +PG EY++ E V N +L LT K+ R+Q +IDQ ++ +I+ + Q+PA+P SL +W A +G P + SG + F+++PKIYGGTNHHRAFKTQ+ MK+GR+TR
Sbjct: 26 DGLLAAKVAKLDQQKRVTDEMNAILTRENGLNDTSHKTMRNLEVAVVVSKQPGFFEYFQAPSEVQAAVRNNDLVQLTKKVKRIQSEIDQ------IDAEIEHLRSK----------QTPAAPALGEMRSLKQWLAHHGAP-KQPPSGYFSTFQDAPKIYGGTNHHRAFKTQSMTMKRGRLTR 190
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A1V9ZEM2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEM2_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.280e-30 Identity = 76/179 (42.46%), Postives = 102/179 (56.98%), Query Frame = 3
Query: 120 DELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
DEL A K L Q+E A F+ L GGLN+ +R+TCKNLE AI + +PG YY + +V NGEL L IV+LQ+ IDQ D + A A + AA P + SL +WF+ YG P + +SGM+T+F PK+YGGT H+ AFK+Q+ MKKGR+T+
Sbjct: 2 DELRAKKAELLLAQQEKADRFHELLVGPGGLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVVKAVVKNGELRKLQGVIVQLQQKIDQI--------DAELANHAAKAAAA------PVTNEVQSLKQWFSTYGTP-KPVTSGMLTSFATDPKVYGGTEHYSAFKSQSLTMKKGRLTK 165
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A7S2FSZ0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSZ0_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.270e-29 Identity = 72/175 (41.14%), Postives = 102/175 (58.29%), Query Frame = 3
Query: 138 KVRKLGQQEELAKEFNFTLTRQG--GLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
K+ KL +Q+ +A E N LTR G GLN+ +R+T KNLE A+ ++ RPG EYY+P+ E I NGE+ L K+ RL +I Q Q + +++ ++S P +SLA+W A YG + SG + F ++PKIYGGT HHRAFKTQ+ MK+GR+ R
Sbjct: 10 KMAKLKEQKRVADEINELLTRPGEDGLNESSRKTMKNLEVAVVVSKRPGFFEYYKPAPEVEAIQKNGEIQHLVKKLNRLGGEIAQLDAESQNIEAMRKPLKMSSG------------PELTSLAQWNARYGTVEKPVPSGFYSGFNDAPKIYGGTEHHRAFKTQSRTMKRGRLIR 172
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A812TWU8_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TWU8_SYMMI) HSP 1 Score: 119 bits (298), Expect = 5.120e-29 Identity = 76/186 (40.86%), Postives = 101/186 (54.30%), Query Frame = 3
Query: 126 LTAL---KVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPP-----CSSLAEWFAAYGEPARS-ASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
LTAL KV+KL +Q+ L+ N LT++GGLND ++ KNL AIA+A +PG EYY E I + L+ L + ++ R+IDQ A H Q PP +S+++WF YG P + MT F+ SPKIYGGTNHHRAFKTQA+ MKKGR+T+
Sbjct: 9 LTALYERKVQKLNEQKALSDRMNELLTKKGGLNDNSKNVRKNLSAAIAVAKQPGYFEYYETPSEVREIEDSKILSSLVKSLGKVHREIDQINSEI------------------AHHHQKGPEPPKAESSLTSMSQWFETYGRPENTHCLEERMTTFQPSPKIYGGTNHHRAFKTQASNMKKGRVTK 176
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A067CQ53_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ53_SAPPC) HSP 1 Score: 118 bits (296), Expect = 6.610e-29 Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 3
Query: 126 LTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
L A K L Q+E A F+ LT GLN+ +R+TCKNLE AI + +PG YY + A IV NGEL L + IV+LQ+ IDQ +V+ AA + +PA +L +WF+ YG P + +SG++T+F PK+YGGT H+ AFK+Q+ MKKGR+T+
Sbjct: 4 LRAKKEELLFAQKERADRFHELLT---GLNEASRKTCKNLEAAITASKKPGYFLYYEQPDVAKAIVKNGELRKLQSAIVQLQQKIDQVDAEIEVQ---------------AAKSSAPAPAEVQTLKQWFSTYGTP-KPVTSGVLTSFAADPKVYGGTEHYSAFKSQSLTMKKGRLTK 161
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A1V9ZCG4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCG4_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.610e-28 Identity = 74/182 (40.66%), Postives = 100/182 (54.95%), Query Frame = 3
Query: 120 DELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQ---DIQQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
+EL A K L Q+E A +FN L LN+ +R+TCKNLE AI + +PG YY + +V NGEL L N IV+LQ+ IDQ +Q I+ G S+ SL +WFA YG P + +SGM+T+F PK+YGGT H+ AFK+Q+ MKKGR+T+
Sbjct: 2 EELRAKKTELLHAQKEKADKFNEILE---SLNEASRKTCKNLEAAITASKKPGYFSYYEQPDVVKAVVKNGELRKLQNAIVQLQQKIDQIDGELMNQQGTNSIENGGQSDSNV--------------QSLKQWFATYGTP-KPVTSGMLTSFVNDPKVYGGTEHYAAFKSQSLTMKKGRLTK 165
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: W4G997_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G997_9STRA) HSP 1 Score: 115 bits (289), Expect = 9.020e-28 Identity = 75/182 (41.21%), Postives = 102/182 (56.04%), Query Frame = 3
Query: 120 DELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDIQQAG---AVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
+EL K L Q E A +FN L GGLN+ +R+ CKNLE AI+ + +PG Y+ + +V NGEL L IV+LQ+ IDQ D++ A +AS T ++ SL +W + YG P + SSGMMT F +PK+YGGT H+ AFK+Q+T MKKGRIT+
Sbjct: 2 EELQKKKEELLRAQRENADKFNAILNGPGGLNETSRKMCKNLEAAISASKKPGYFMYFEQPDVVKAVVKNGELRKLQTMIVQLQQKIDQV--------DVEIANHSKGLASHTTGGGGRETD----IHSLKQWLSTYGTP-KPVSSGMMTCFSANPKVYGGTEHYSAFKSQSTTMKKGRITK 170
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Match: A0A3R6VT06_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VT06_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.690e-27 Identity = 73/180 (40.56%), Postives = 104/180 (57.78%), Query Frame = 3
Query: 120 DELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARQTCKNLEYAIAIATRPGQIEYYRPSEEAARIVANGELAVLTNKIVRLQRDIDQAKQHCQVEQDI-QQAGAVASSTAAAAHAQSPASPPCSSLAEWFAAYGEPARSASSGMMTNFEESPKIYGGTNHHRAFKTQATVMKKGRITR 656
++L K L Q E A FN L+ GGLN+ +R+ CKNLE AI + +PG Y+ + +V NGEL L IV++Q+ ID V+ +I A A A++TA+ ++ SL +W + YG P + SSG++T F +PK+YGGT H+ AFKTQ+T MKKGRIT+
Sbjct: 7 EDLQKKKEELLHAQREKADRFNALLSGPGGLNETSRKVCKNLEAAITASKKPGYFMYFEQPDVVKAVVKNGELRKLQTAIVQIQQKIDL------VDAEITNNARANATTTASGRESE------IQSLKQWLSTYGTP-KPVSSGILTCFSANPKVYGGTEHYSAFKTQSTTMKKGRITK 173 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1075.682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1075.682.1 >prot_Ecto-sp13_S_contig1075.682.1 ID=prot_Ecto-sp13_S_contig1075.682.1|Name=mRNA_Ecto-sp13_S_contig1075.682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp MSGSTSNHQGSRRQDELTALKVRKLGQQEELAKEFNFTLTRQGGLNDQARback to top mRNA from alignment at Ecto-sp13_S_contig1075:11388..14509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1075.682.1 ID=mRNA_Ecto-sp13_S_contig1075.682.1|Name=mRNA_Ecto-sp13_S_contig1075.682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1075:11388..14509- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1075:11388..14509- >mRNA_Ecto-sp13_S_contig1075.682.1 ID=mRNA_Ecto-sp13_S_contig1075.682.1|Name=mRNA_Ecto-sp13_S_contig1075.682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=582bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1075:11388..14509- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |