mRNA_Ecto-sp13_S_contig2005.6545.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig2005.6545.1
Unique NamemRNA_Ecto-sp13_S_contig2005.6545.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE)

HSP 1 Score: 619 bits (1595), Expect = 1.850e-216
Identity = 303/311 (97.43%), Postives = 306/311 (98.39%), Query Frame = 1
Query:   73 VVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKDTTL 1005
            VVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERT V GE LDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSA+TSCSDCLGG+KYSSCG+HTDESTGTEYKFWYPDDETTQFLYETYP VVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQ LTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKDTTL
Sbjct:   78 VVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTTVDGEILDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSANTSCSDCLGGSKYSSCGDHTDESTGTEYKFWYPDDETTQFLYETYPGVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQVLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKDTTL 388          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A6S9FRN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRN7_HETAK)

HSP 1 Score: 285 bits (728), Expect = 2.490e-86
Identity = 146/323 (45.20%), Postives = 201/323 (62.23%), Query Frame = 1
Query:   61 TATLVVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDEN-CEPLERTAVGGETLDLNPCGLIANSMFNDIIEL---TTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSD-------CLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKD 996
            ++  V E+K +YDGDS D   C IT   QG  CS+   +D+ M  P+Y+YY+L N++QNHRRYV SR   QL G  +  D + C PL  T+ G +  DLNPCGL+ANS+FND+I L   T   V + E  I+W SDR T+F QP GF +     D  C++           + Y  C  +TD +  T Y ++YP+++  Q+LYET+PEV++PIEGV NEHFIVWMRTA LP+FRKLYG ID  +    ++TF +TAN+ V  F G KS++++N S  G +N  LG+ YI  G +SL++ +AF IK    PR L +   L+WK 
Sbjct:   55 SSDAVTEYKIQYDGDSSDP--CTITSYKQGRECSLTFNIDKDMDGPVYLYYQLTNFYQNHRRYVSSRYDAQLQGSTLHADTDYCSPL--TSNGSQ--DLNPCGLVANSLFNDVIALEASTNAAVALDETGITWDSDRATKFAQPDGFAYVTLGDDAGCTELPCTCETAFDSSDYDDCEFYTD-AENTTYAYYYPENDEIQYLYETFPEVINPIEGVTNEHFIVWMRTAALPKFRKLYGIIDTDLTEGDEITFKVTANYLVSSFDGTKSIILANASWFGGKNAVLGMVYIVAGVVSLSLAIAFGIKQKLQPRALANPAELLWKQ 370          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A6U4G101_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G101_9STRA)

HSP 1 Score: 285 bits (730), Expect = 7.770e-86
Identity = 152/335 (45.37%), Postives = 209/335 (62.39%), Query Frame = 1
Query:   73 VVEFKRRYDGDSVDVEG--------CKITERN--------QGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGF-----------TFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKD 996
            VVE+K +YDG   D +         CKIT  +            C++ I VD+ M+  +YVYYEL+N++QNHRRYVKSR   QL GE      + +        G+T+ L+PCGLIANS+FND+I L    + M+E DI+W+SD++ +F QP  F           T A C    S +  +  ++ S+ G+ T E  G ++ ++Y +++   +LYE +PEV++P+EGV NEHFIVWMRTAGLP+FRKLYGRI++ I     LTF IT  F V +F G+K LVVS  +  G RNP+LGIAYI +G++ LA+ L F  KH  +PRKLGDTR+LVWKD
Sbjct:   99 VVEYKCQYDGSGADEDSSDCTISPSCKITTDDLTALSPGASPDPCNITINVDKKMEGDVYVYYELHNFYQNHRRYVKSREDAQLRGETFTSKNDLKDCLPLVEKGDTI-LSPCGLIANSLFNDVITLQNTEIDMAEDDIAWESDKDAKFDQPDDFVKERYTGTGTATDAACQTQLSSNGDVPSDQLSNVGSTTFE--GEQWCYFYNNEDDITYLYEVFPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEQDISEGTQLTFQITPRFIVDEFDGKKFLVVSTTTWFGGRNPFLGIAYIVVGAICLALALLFFAKHAISPRKLGDTRYLVWKD 430          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A7R9U6E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E4_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.280e-85
Identity = 163/333 (48.95%), Postives = 214/333 (64.26%), Query Frame = 1
Query:   73 VVEFKRRYDGD------SVDVE-GCKI-TERNQ--GTT----CSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSD----CLG-------GNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKD 996
            VVEFK +YDG+      S  +E  CKI TE+ +  G T    C + I+VDE M+  ++VYYEL+N++QNHRRYVKSR   QL GE    + + +        G+T+ L+PCGLIANS+FND+I LT   V M E DISW+SDR+ +F QP  F  +E   +TS SD    C+         ++ SS G    E  G ++ F+Y +++   +LYE YPEV++P+EGV NEHFIVWMRTAGLP+FRKLYGRI+E I     L F I   F V +F G+K +VVS  +  G RNP+LGIAYI +GS+ L + L F +KH   PRKLGDTR+LVWKD
Sbjct:   62 VVEFKCQYDGEGAGNSSSCTIEPSCKISTEQLEALGDTAPDPCYITIDVDEKMEADVFVYYELHNFYQNHRRYVKSREDAQLRGEVFTSESDLQDCLPLVEKGDTV-LSPCGLIANSLFNDVITLTNSDVEMREDDISWQSDRDAKFDQPDDF-ISERLRNTSASDKAQACIEQLESDVPDSQVSSIGFTVFE--GEDWCFFYRNEDQITYLYEIYPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEEDIPKGTQLRFQIVPRFIVEEFDGKKFIVVSTTTWFGGRNPFLGIAYIVVGSICLFLSLVFFVKHTVAPRKLGDTRYLVWKD 390          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A836CGC5_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC5_9STRA)

HSP 1 Score: 270 bits (691), Expect = 6.240e-81
Identity = 136/307 (44.30%), Postives = 195/307 (63.52%), Query Frame = 1
Query:   79 EFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCL-----GGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFL 984
            +++ +YDG+  D   C+IT  N+G  C++   + + +  PIYVYYEL+N++ NHR+YV+S S  QLLG  +     C PLER       L L+PCGLIAN++FNDII +T++ V M E  I+W +D + +F+QP GF    C+A   C+ CL       + Y  CG  TD S GT Y +WYPD++  Q+LYET+P+V+SP+EGV NEHF+VWMR AGL +FRK YG+I + +     +TFN+  NF V  F G KSLV+S++S +GA N Y   +++ +G L L + L  ++     PR LGD + L
Sbjct:   65 DYEFQYDGNGADSTDCEITTANEGKNCTISFTLTKDLPAPIYVYYELHNFYSNHRKYVQSFSQDQLLGSQISDLSACTPLERNG----DLTLSPCGLIANTLFNDIITVTSDQV-MEETGIAWNTDLD-KFEQPHGFVTTACAATDECASCLQAAYNSDDDYDGCGIATDAS-GTSYAYWYPDEDKIQYLYETFPDVISPLEGVKNEHFMVWMRVAGLRQFRKPYGKISQSLAKGTTVTFNVVNNFLVSSFGGSKSLVMSHVSDLGAPNVYWPQSFLVIGFLVLGLALVVILVQTCAPRPLGDVKML 364          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A835Z5R6_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R6_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.720e-80
Identity = 146/314 (46.50%), Postives = 197/314 (62.74%), Query Frame = 1
Query:   64 ATLVVEFKRRYDGDSVD---VEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDII---------ELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLG 969
            +T   E+K +YDG       +  C I+  N+  TC+V I V + M+ P+YVYY+L+N++Q+HRRYV S S  QL+G  V+ D  C PL++   G + L  NPCGLIANSMFND+          + T     M E  I+W +D + RF QP GF    C    SC+ CLG   Y+ CG  TD + G  + ++YP+D TTQ+L+ETYP+VVSP+EGV NEHF+VWMRTA LP FRKLYG ID  I    D+ F+I ANF V +F+G+KS+V+++   +G  N  LGIAY+ +G + L +GL  L K L  PR LG
Sbjct:   57 STTAKEYKVQYDGVGTSPAILADCGISTTNEDKTCTVTISVKDKMEAPVYVYYQLDNFYQSHRRYVASLSPSQLMGSNVQGDSLCSPLKKN--GDQWL--NPCGLIANSMFNDVFTVSAAPAPFDATAPAAYMRETGIAWPNDID-RFSQPDGFVKKSCGGTASCASCLGAG-YTDCGVATD-ADGKRWAYYYPNDATTQYLHETYPKVVSPLEGVTNEHFMVWMRTAALPTFRKLYGIIDSDIPGGWDVQFDINANFLVANFNGKKSIVLASSVGVGGFNGALGIAYLVIGGVLLLVGLLLLAKVLLKPRPLG 363          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A7S3H696_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H696_9STRA)

HSP 1 Score: 268 bits (684), Expect = 5.910e-80
Identity = 140/315 (44.44%), Postives = 190/315 (60.32%), Query Frame = 1
Query:   61 TATLVVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEG-----VTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVW 990
            ++  + E +  YDG +  V  C I+++N+G  CS+    DE    PIYVYYEL N++QNHRRYV SR SLQL GEA+   +     E     G  L +NPCGLIANS+F D+  L         V+M   +I+W SD+E +FKQP GF     ++  + + C        C  + D +TGT+Y F YP+D T Q+LYE+YP  +SP+ GV ++HF VWMR A LP+FRKLYG+ID   +    LTF +TANF V  F G KSL++SNL   G +NP+LG+AY+ +GS+SL   L F++K    PR   D   L W
Sbjct:   53 SSNAIYEKRIMYDGSNQAVS-CSISDQNEGKVCSLTFNFDEDADGPIYVYYELENFYQNHRRYVSSRDSLQLAGEAISKADLQTTCESFINNGSQL-INPCGLIANSLFTDVFTLDNAASNPSTVSMDSSEIAWASDKE-KFKQPQGFQSKVVTS--TANTCAQEGLPDDCKYYQDPATGTQYYFHYPNDNTVQYLYESYPNHISPVVGVTDQHFKVWMRPAALPQFRKLYGKIDHNYKKGDTLTFTVTANFEVESFDGSKSLLISNLGEFGGKNPFLGVAYVVVGSISLMFALLFVVKQTVAPRAKADASLLNW 362          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: A0A836CBM9_9STRA (Ligand-effect modulator 3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM9_9STRA)

HSP 1 Score: 265 bits (677), Expect = 3.230e-78
Identity = 144/338 (42.60%), Postives = 196/338 (57.99%), Query Frame = 1
Query:   73 VVEFKRRYDGD--SVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGE--AVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELT---------TEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMR-----------------TAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKD 996
            VVE++ +YDGD  +  +  C +T  NQ   C+V+ +VD  M+PPIYVYYE+    QNHR+YVKSRS+ QL G+  A+  D+NCEPL + A  G+ L  NPCGLIANSMF D++ +          + G  MSE  I+W  DR       P                        C     +  G  + +WYP D+T ++LYETYP +V+PIEGVLNEHF+VWMR                  AG+P FRK+YGRID ++E    +TF++ A+++V  F G K++V+S LS +GA N + G AY+A+G L+  I + F IKHL NPR LGD RFL  +D
Sbjct:  101 VVEYRIQYDGDGAAAGLAACAVTGFNQSAACTVRFDVDATMEPPIYVYYEVGKLLQNHRKYVKSRSAPQLTGDESALLGDDNCEPLRKDAASGQWL--NPCGLIANSMFTDVLSVADAPAPFDGASSGSFMSETGIAWPVDRGRALLLSPHALV--------------------CRRDLTQYRGQRWAYWYPSDDTIRYLYETYPAIVNPIEGVLNEHFMVWMRCILSNNILPPPAERCCRAAGMPTFRKVYGRIDTKLEPGDHVTFDVQASYYVSGFDGTKAIVLSTLSNVGAHNTFAGPAYMAMGILAFLIAVGFTIKHLLNPRGLGDARFLNMRD 416          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: D8LE53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE53_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 6.310e-77
Identity = 139/315 (44.13%), Postives = 193/315 (61.27%), Query Frame = 1
Query:   73 VVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPD-ENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCL---------GGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLV 987
            VVE + +YDGD  D + CKIT   +   C++  +V++ +  P YVYYEL N++QNH  YV S  S QLLG     D ++C+PL    +   TL L+PCGLIAN++FNDI  +++ G TM E DI+W SD   +F QP GF    C  +  C  CL         GG  +  CG    +ST     ++YPD++TTQ+LYET+PEV+SP++GV NEHFIVWMR +GL  FRKLYGRID+ +     L+F+++ NF V  + G KS++VSN +  G RN Y G +  ++G + L + L   IK L  PR +GD   L+
Sbjct:   64 VVELRYQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNHATYVASVGSSQLLGSTSTSDIDDCDPL----IYNGTLVLHPCGLIANTLFNDIFTVSS-GQTMEETDIAWDSDVADKFVQPDGFVTTACEDEDGCVACLTDAGLTDSDGGTTFEGCG--VTDSTA----YYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDVSNNFIVDYYDGTKSIIVSNTNDFGGRNLYWGQSLPSIGGVVLVLALLIAIKQLVWPRTMGDISKLL 367          
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Match: D8LLD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD4_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.840e-76
Identity = 131/251 (52.19%), Postives = 169/251 (67.33%), Query Frame = 1
Query:   73 VVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPDENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTT-----EGVT----MSEKDISWKSDRETRFKQPPGFTFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKFWYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQDLTFNITAN 798
            VVE  ++Y+G    V+ C I+E N+G    V+  +D+ MK PIYVY+EL  ++QNHR YVKSRS  QL G  V     C PLE      +TLDLNPCGL+ANSMFND+I + +     E ++    M E  ISW +DR+  F QP GF  AEC+   SC DCLG   YS CG+ TD  TGT YK+WYPD+ +TQ+LYETYP V+SP++GV +EHF+VWMRTA L  FR LYGRI+  + AP ++TFN+TA+
Sbjct:   38 VVELTQQYEGSGTTVDDCSISEANEGK--EVKFSIDKDMKGPIYVYFELRKFYQNHRSYVKSRSFDQLKG-GVPGAGICSPLESI----DTLDLNPCGLVANSMFNDVIVVDSAPEPYESLSPYEYMDEGGISWVTDRDGDFSQPDGFVRAECAPSVSCEDCLGSAAYSDCGSFTDR-TGTSYKYWYPDEASTQYLYETYPNVISPVDGVTDEHFVVWMRTAALSTFRNLYGRIEHDLVAPAEITFNVTAS 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2005.6545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEE3_9PHAE1.850e-21697.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9FRN7_HETAK2.490e-8645.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U4G101_9STRA7.770e-8645.37Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U6E4_9STRA1.280e-8548.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A836CGC5_9STRA6.240e-8144.30CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A835Z5R6_9STRA3.720e-8046.50CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3H696_9STRA5.910e-8044.44Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A836CBM9_9STRA3.230e-7842.60Ligand-effect modulator 3 family n=1 Tax=Tribonema... [more]
D8LE53_ECTSI6.310e-7744.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LLD4_ECTSI1.840e-7652.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2005contigEcto-sp13_S_contig2005:10714..14944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score650.6
Seed ortholog evalue4e-184
Seed eggNOG ortholog2880.D7FT99
Preferred nameTMEM30B
Model size2052
KEGG koko:K08817
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006869,GO:0006886,GO:0006887,GO:0006897,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0010008,GO:0010570,GO:0010720,GO:0010876,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015247,GO:0015605,GO:0015711,GO:0015748,GO:0015833,GO:0015893,GO:0015914,GO:0015917,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022857,GO:0023052,GO:0030141,GO:0030154,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031344,GO:0031346,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034204,GO:0034220,GO:0034613,GO:0035577,GO:0035579,GO:0036010,GO:0036230,GO:0040008,GO:0042119,GO:0042221,GO:0042493,GO:0042581,GO:0042582,GO:0042623,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043492,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045332,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046903,GO:0046907,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051641,GO:0051649,GO:0051666,GO:0051716,GO:0051960,GO:0051962,GO:0055085,GO:0060284,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070861,GO:0070863,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090087,GO:0090316,GO:0097035,GO:0097708,GO:0098588,GO:0098656,GO:0098657,GO:0098791,GO:0098805,GO:0098852,GO:0099503,GO:0120035,GO:1902494,GO:1903827,GO:1903829,GO:1904949,GO:1904951,GO:1990351,GO:1990530,GO:1990531,GO:2000026
Exons7
EggNOG free text desc.aminophospholipid transmembrane transporter activity
EggNOG OGsCOG5035@1,KOG2952@2759
Ec32 ortholog descriptionCDC50/LEM3 family
Ec32 orthologEc-06_003580.1
EC2.7.11.22
Cds size1008
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2005.6545.1prot_Ecto-sp13_S_contig2005.6545.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig2005 11758..14944 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463008.9485865-UTR-Ecto-sp13_S_contig2005:10713..117571681463008.9485865-UTR-Ecto-sp13_S_contig2005:10713..11757Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig2005 10714..11757 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463008.9627748-CDS-Ecto-sp13_S_contig2005:11757..119691681463008.9627748-CDS-Ecto-sp13_S_contig2005:11757..11969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 11758..11969 -
1681463008.9723752-CDS-Ecto-sp13_S_contig2005:12597..127721681463008.9723752-CDS-Ecto-sp13_S_contig2005:12597..12772Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 12598..12772 -
1681463008.987339-CDS-Ecto-sp13_S_contig2005:13082..133121681463008.987339-CDS-Ecto-sp13_S_contig2005:13082..13312Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 13083..13312 -
1681463008.9999702-CDS-Ecto-sp13_S_contig2005:13638..137441681463008.9999702-CDS-Ecto-sp13_S_contig2005:13638..13744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 13639..13744 -
1681463009.0083175-CDS-Ecto-sp13_S_contig2005:13999..141021681463009.0083175-CDS-Ecto-sp13_S_contig2005:13999..14102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 14000..14102 -
1681463009.0168993-CDS-Ecto-sp13_S_contig2005:14561..146711681463009.0168993-CDS-Ecto-sp13_S_contig2005:14561..14671Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 14562..14671 -
1681463009.0266395-CDS-Ecto-sp13_S_contig2005:14872..149441681463009.0266395-CDS-Ecto-sp13_S_contig2005:14872..14944Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig2005 14873..14944 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig2005.6545.1

>prot_Ecto-sp13_S_contig2005.6545.1 ID=prot_Ecto-sp13_S_contig2005.6545.1|Name=mRNA_Ecto-sp13_S_contig2005.6545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=336bp
MLANRSPACSCASEQRPPERTATLVVEFKRRYDGDSVDVEGCKITERNQG
TTCSVQIEVDEFMKPPIYVYYELNNYFQNHRRYVKSRSSLQLLGEAVEPD
ENCEPLERTAVGGETLDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWK
SDRETRFKQPPGFTFAECSADTSCSDCLGGNKYSSCGNHTDESTGTEYKF
WYPDDETTQFLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRID
EQIEAPQDLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIAL
GSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKDTTL*
back to top

mRNA from alignment at Ecto-sp13_S_contig2005:10714..14944-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig2005.6545.1 ID=mRNA_Ecto-sp13_S_contig2005.6545.1|Name=mRNA_Ecto-sp13_S_contig2005.6545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4231bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2005:10714..14944- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCGCCAACCGCAGCCCTGCCTGCAGTTGCGCGTCCGAGCAACGCCC GCCGGAGCGCACGGCAACACTAGTGGGACTCAGATCGCCCGCGAAACAAG CAATTGAGCAGAAGTGTTGCTGCGCGGTTGCTCTCTGCCTCCGAGTGTTT TTTTTTACAAACCAATGGCGGGAAATTTTTGGTGTGGTGAGCCGCGCGGG ACACGGCCTCAAGCGTCAAATGACACAACTGAAACTGGTTCGATTTTCTT CGGCGCGCCAAAAATCAAAACAGGTGGTGGAGTTCAAGCGGAGGTATGAC GGCGACAGCGTGGACGTGGAGGGATGCAAGATCACGGAGCGTAACCAGGG CACCACGTGCTCGGTCCAGATCGAGGTCGATGAGTGAGTCTCGGGGCAGG ACCACCCGCTCGCAACAACCTCCGACGGGCGTTGGTACCGTGTCATTTTT ATTCTTTCAGCTTTCTCGCCCGAGCCATCAGGGCCTGCGTGCGTGCCGCG TCAGGTGGTGGCCCCCCTTCATGCCAACCCCGGCTTAACGGCTTTGATTT GAGATGACGTTGCTGTTGCTACAGCGCAGAACGAGCCACGACTTGAAAAA GCTCTTATTTAGCTAGCTCGACCCTCGCTCACTTTTCTTGATCAGCGGGA GAAGCAATAGAGAATTGTTGGTGTCCGCGTGTGTAGGGTACACGGAGATG AGCCAGCCTCCCTGCCATTCCTCTCACCTCGCCGCGTAGTCTCTGCTCCT CTCTCAACCCCCCCAGCTCCCCTCACGTTCCACCGTGAACCGAAATCGCC TACGCCTCGTAACCTACCGCCTTGACTCGTTTGGTCGGACAGGTTCATGA AGCCACCTATCTACGTGTACTACGAGCTGAACAACTACTTCCAGAACCAC CGCAGATACGTCAAGTCTCGGAGCTCGCTACAGCTTCTCGGCGAGGTACG TACCCTTGCGTGCATAAATTAAAGCGACACAAGCCATCGCGTTTGACGCC CACCGCAAAAAAAATATTCTCATCATTCGGCGACCTTCAACCTGCAGCGG TGTTTCGTCCCTGGAAAAATCCGCGCGTCATCGTGTACGGCACGTCCATC CTCACGTGCCACGCCCGAAGTAATCCACGCCTGTTTGTCACCTATCCCCC CGGTTTGGTTGCGCGTCGTGCCCTGCCACGGACACGGACACTGGCGCCAG GCGGTGGAACCGGACGAAAACTGCGAGCCGTTGGAGCGGACGGCCGTTGG CGGAGAGACACTGGACCTGAACCCATGCGGGTTGATCGCGAACAGTATGT TCAACGGTGAGGCAGAGCACGGGGAGAGCGAGTAGGGTCCCGAAGCTCGG GGGCGGAGAGATTTTACGAGAACCTTTCTTGTTGTAGCGTGTTAAACACG AGGCTGAGTGGGACAAAGGAAACAGCCACGGCAGCACCAACAAGAGCAGC AGCAGGACCAGGAAACGAAACCACGTCCCTTGCCCCCCCCCTCTTGTTCG TTCAAAAATGTGGAGCTTATCCCATCGGCCGGCGTCAGTTGCTACGGCCG GCAATGAAACGGGCTCAGCCCCTTATAGCACGACCGACGACGAAACACGT AACCCCCGCACGCTTCTGCGACGAACATCCAGATATCATCGAGCTCACCA CCGAGGGCGTGACCATGTCCGAGAAGGACATATCGTGGAAGTCGGACCGA GAGACGCGGTTCAAGCAGCCGCCGGGCTTCACGTTCGCGGAGTGCTCCGC CGACACGTCCTGCTCCGACTGCCTCGGCGGCAATAAGTACTCGTCCTGCG GGAACCACACCGACGAGTCCACCGGGACGGAGTACAAGTTTTGGTACCCT GATGACGAGACGGTGAGCCGCCGCTCCTTTCCATCGTCGGACTTTTCTCG ATCGGGTTGTGCGTTGTGGGTACAACAGCGCGCCCCTCAAGATACACACA CGTACACTTTTCATTGGTCAGCCGGTTAGCGCGGTCGATGCCAATAGTAA AGACACACACTGTTTGCGCCCAGCTTCGTCCATCGACCCCCCCATCGTGT CGGCGGAGCCCCCCATAGGTCTAACTACTACGACATGGAAAACGTGAGTA TGCCCCCCGCCCTGGAAGTCAGCAGCTTTTTTTTTATTTTATGTCCCGCG TTACCCTTCACGTGTTTCGCAGACACAGTTCCTGTACGAGACGTACCCAG AGGTGGTGAGCCCCATCGAGGGCGTCCTGAACGAGCACTTCATCGTGTGG ATGCGCACGGCAGGGCTGCCGCGGTTCCGCAAGCTGTACGGGAGGATCGA CGAGCAGATAGAGGCGCCGCAGGACCTGACCTTCAACATTACCGCAAGTG AGGAACGGGACGTTGATGTTGCCAAATTATGTTGGGATGCCATCTTTCGT GCTTTCGCCTCGTTGGACTGAAGTAGTCTCCGAAAACGATTGCGGCATAT GTGCTCCGTGCAGCTTTGTTTAGATCCGCGGCTAATTGGCAGGGTTGCGC CCGGTTGTCGGATTTACGTTGTGCGGTAGACACGGATACTTGGCCATTGC TCGAGCGTGTGTATGTTTCGATGAAAAACAAGCGTGTTCCTCGCGATTAC GCACAGGCACGCTTCTGCCTGTGTTGCCGAAGCTATCGTCGGTAATTATT TCTGCCCCTTTCTCTCGTCTGGTCTTGGTCTTGCCTCGTGGATCCTCCTT GGCAGGATTCGGCACTTTCCCACTACTCCAACGTATCCCTACCCCCTCGT CCACGTCTTGAAATTTTTGACATGCGTCGACAGTGAACACAACCTACAAC CGACTCCATCCCAGACCGACACGAGTCCACCTTTCCGGCGCCTGTATCTG GTGTCTGTCTGATGGAAGAACAGGAAACGCGACGAGAGTAAATCCCCCCC CCCTGCCCTCGATTTTTTTCTCACACGAGCGGACCCCCCCCCCCCGGTTG ACTTGTTTCGGCGACGGCAACGCAGATTTTTTCGTGGGCGACTTCTCAGG GGAGAAATCACTCGTCGTCTCGAACTTGTCTTTGATGGGGGCCCGGAATC CGTACCTGGGCATCGCGTATATTGCCCTCGGGTCTCTCTCCCTTGCGATC GGACTCGCGTTCCTCATCAAGCACTTGTCGAATCCGAGGAAGCTGGGGGA CACGCGGTTCTTGGTCTGGAAGGACACCACGCTTTAAGCATGCCGGTTGT GCAATGGAAGAAGGTGCAGGTATATGGCTTTTTTTTTTTTTTTCGCTCCA AGGTTGGGTGGTGGATGGTTCAAACTAGCGGTTCCGAGTGGCGTTTTCGC AGTTTTTTTTGTCACCTTCGGCGTGAAGGCCGCTCGTCATCTGACGTCCC CCATGTCGTGGTGTAGGGTGAGGGCACTTATCGAGCACGTATGCTTAGCT AGGGTGTGCGCGTATTCATGCAAGTAAGCAACGGGCCTTGCTGTGTGATA GCTCGGGGCATTGTTGTGTCCAATTCTTCGTTGCAACACATAGTAGTGGT TGGGCCTGCTGTAGAGGAGTTTGTTTAGATAACCATATCCACCAGTTGGC TTCGGTCTGTCCGTGTCGTAGTCTATCACGCAGTTCGGTGTGTAAGTTTA TTGTGTGTGTAAGAAGTGTTCGGAAAGGGTGTCTTGTGTGTTTTTTTACC TCTTTTAGTTCTCGAAATATATAGATTCGTCTGGAGCGCTTGTGAATGCT CCCTCCGCGTTTTGTAGACCCTGTTGTACAGGGGTAAGAGTTTTCTTCGT GTTTGTTGATGGGTTGAGGGAAGACCCTCCCCCCTCGCCGGTGTTTGGTG GTTCCTCGCTCGACGCCCGTTGTAAGTTTTGCTTTAGTTTGTTGTCCCTG GTTTTCTACGCGCGGCTGTGGTCGGCCCGCTGTTCAGCTCCGTGGAAAGG GCGGTGACATCCGCGGCGTGTCTCCAGCGCACTGTTCAAAACTTCTTCAG ATGGTCACCATTTGCGCGCAGGCCGGCCGCCCACTTGTTTGTTCACGTTG CGTAGCTTGACAGGTATCGAGCGGGACAAGACTGTAGGAGATGGTTTGAG GTTCTGCCCGAGGTCCGCGTTGCTTGTGTATCAGCACCCTCCGCACGCTA GCCCAGTTTGTGAATCTCCGGCTCTGGTCCTGTCCGATGCCTATTCCGAA AACGGGCGGTTTAATAGTTTCTAGCGTCTAGCCTTGGCAAAAATTATCAT TCGAAAGATTGGTCTCTCTGACAATAAGCCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig2005:10714..14944-

>mRNA_Ecto-sp13_S_contig2005.6545.1 ID=mRNA_Ecto-sp13_S_contig2005.6545.1|Name=mRNA_Ecto-sp13_S_contig2005.6545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1008bp|location=Sequence derived from alignment at Ecto-sp13_S_contig2005:10714..14944- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCGCCAACCGCAGCCCTGCCTGCAGTTGCGCGTCCGAGCAACGCCC
GCCGGAGCGCACGGCAACACTAGTGGTGGAGTTCAAGCGGAGGTATGACG
GCGACAGCGTGGACGTGGAGGGATGCAAGATCACGGAGCGTAACCAGGGC
ACCACGTGCTCGGTCCAGATCGAGGTCGATGAGTTCATGAAGCCACCTAT
CTACGTGTACTACGAGCTGAACAACTACTTCCAGAACCACCGCAGATACG
TCAAGTCTCGGAGCTCGCTACAGCTTCTCGGCGAGGCGGTGGAACCGGAC
GAAAACTGCGAGCCGTTGGAGCGGACGGCCGTTGGCGGAGAGACACTGGA
CCTGAACCCATGCGGGTTGATCGCGAACAGTATGTTCAACGATATCATCG
AGCTCACCACCGAGGGCGTGACCATGTCCGAGAAGGACATATCGTGGAAG
TCGGACCGAGAGACGCGGTTCAAGCAGCCGCCGGGCTTCACGTTCGCGGA
GTGCTCCGCCGACACGTCCTGCTCCGACTGCCTCGGCGGCAATAAGTACT
CGTCCTGCGGGAACCACACCGACGAGTCCACCGGGACGGAGTACAAGTTT
TGGTACCCTGATGACGAGACGACACAGTTCCTGTACGAGACGTACCCAGA
GGTGGTGAGCCCCATCGAGGGCGTCCTGAACGAGCACTTCATCGTGTGGA
TGCGCACGGCAGGGCTGCCGCGGTTCCGCAAGCTGTACGGGAGGATCGAC
GAGCAGATAGAGGCGCCGCAGGACCTGACCTTCAACATTACCGCAAATTT
TTTCGTGGGCGACTTCTCAGGGGAGAAATCACTCGTCGTCTCGAACTTGT
CTTTGATGGGGGCCCGGAATCCGTACCTGGGCATCGCGTATATTGCCCTC
GGGTCTCTCTCCCTTGCGATCGGACTCGCGTTCCTCATCAAGCACTTGTC
GAATCCGAGGAAGCTGGGGGACACGCGGTTCTTGGTCTGGAAGGACACCA
CGCTTTAA
back to top