Homology
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A6H5KBQ9_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE)
HSP 1 Score: 182 bits (461), Expect = 2.320e-54
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
+QVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQ AMRDGFM
Sbjct: 252 MQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQSAMRDGFM 347
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A6H5KP74_9PHAE (PHB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP74_9PHAE)
HSP 1 Score: 175 bits (443), Expect = 1.340e-53
Identity = 89/96 (92.71%), Postives = 93/96 (96.88%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
+QVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ F+E IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVA++Q AMRDGFM
Sbjct: 87 MQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFM 182
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
D8LDT1_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI)
HSP 1 Score: 175 bits (443), Expect = 3.320e-51
Identity = 89/96 (92.71%), Postives = 93/96 (96.88%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
+QVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ F+E IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVA++Q AMRDGFM
Sbjct: 293 MQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFM 388
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A835YL74_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA)
HSP 1 Score: 162 bits (410), Expect = 1.690e-47
Identity = 79/96 (82.29%), Postives = 92/96 (95.83%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
+QVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+ FS +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SVASLQGAMRDGFM
Sbjct: 184 MQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESVASLQGAMRDGFM 279
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
F0YP67_AURAN (PHB domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP67_AURAN)
HSP 1 Score: 130 bits (327), Expect = 2.190e-36
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 37 QVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAA-TVFLPHAPQSVASLQGAMRDGFM 321
QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+ FS I GT+PKDVMDLLLLTQYFDML+DVG S + T+FLPHAP SVA LQ +M+ G M
Sbjct: 74 QVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGASGVSGKTLFLPHAPSSVAELQKSMQSGLM 169
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A7S4IJZ4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJZ4_9EUKA)
HSP 1 Score: 133 bits (335), Expect = 2.840e-36
Identity = 61/94 (64.89%), Postives = 85/94 (90.43%), Query Frame = 1
Query: 40 VKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
VKAAEA+AESKYLSGVG++RQRKAIV+GL++SV TF+++++GTS KDVMDL+L+TQYFD L+D+G +S+++T+F+PH+P SV S+ +RDGFM
Sbjct: 186 VKAAEADAESKYLSGVGIARQRKAIVEGLQESVTTFADSVEGTSAKDVMDLVLVTQYFDTLKDLGSNSKSSTIFIPHSPGSVGSVAEQVRDGFM 279
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A6S8S5L6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA)
HSP 1 Score: 130 bits (328), Expect = 2.950e-35
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSVASLQGAMRDGFM 321
VQVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+ FS I GT+PKDVMDLLLLTQYFDML+DVG S S T+FLPHAP +V LQ ++++G M
Sbjct: 185 VQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAVGDLQDSLKNGLM 281
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
W7TM34_9STRA (Hypersensitive-induced response protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM34_9STRA)
HSP 1 Score: 129 bits (323), Expect = 1.540e-34
Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
VQVKAAEA AESKYL+G+G++R+RKAIVDGLR SV+ FSET++G +PKDVMDL+LLTQYFDML+DVG + T+F+ H P +V L+ +R G M
Sbjct: 184 VQVKAAEASAESKYLNGMGIARERKAIVDGLRGSVEEFSETVEGATPKDVMDLILLTQYFDMLKDVGNNPTPTTLFMTHGPSAVTELKEQLRAGIM 279
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A816WVN1_BRANA ((rape) hypothetical protein n=2 Tax=Brassica TaxID=3705 RepID=A0A816WVN1_BRANA)
HSP 1 Score: 124 bits (311), Expect = 1.570e-34
Identity = 57/96 (59.38%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
+Q+K AE EAESKYLSG+G++RQR+AIVDGLR+SV FSE++ GTS KDVMD++L+TQYFD L+D+G SS++ VF+PH P +V + +RDG +
Sbjct: 27 LQIKRAEGEAESKYLSGLGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVTQYFDTLKDIGASSKSNAVFIPHGPGAVKDIASQIRDGLL 122
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Match:
A0A699WBP0_TANCI (Uncharacterized protein (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699WBP0_TANCI)
HSP 1 Score: 123 bits (309), Expect = 1.600e-34
Identity = 56/96 (58.33%), Postives = 77/96 (80.21%), Query Frame = 1
Query: 34 VQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQGAMRDGFM 321
+Q+K AE EAESKYLSG+G++RQR+AIVD LRDSV FSE + GTS KDVMD++L+TQYFD ++D+G SS+++ VF+PH P +V + +RDG +
Sbjct: 5 LQIKRAEGEAESKYLSGLGIARQRQAIVDSLRDSVLAFSENVPGTSAKDVMDMVLVTQYFDTMKDIGASSKSSAVFIPHGPGAVKDIADQIRDGLL 100
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10042.65.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.32e-54 / Id = 97.92 Expect = 1.34e-53 / Id = 92.71 Expect = 3.32e-51 / Id = 92.71 Expect = 1.69e-47 / Id = 82.29 Expect = 2.19e-36 / Id = 71.88 Expect = 2.84e-36 / Id = 64.89 Expect = 2.95e-35 / Id = 70.10 Expect = 1.54e-34 / Id = 63.54 Expect = 1.57e-34 / Id = 59.38 Expect = 1.60e-34 / Id = 58.33 Sequence A0A6H5KBQ9_9PHAE A0A6H5KP74_9PHAE D8LDT1_ECTSI A0A835YL74_9STRA F0YP67_AURAN A0A7S4IJZ4_9EUKA A0A6S8S5L6_9STRA W7TM34_9STRA A0A816WVN1_BRANA A0A699WBP0_TANCI Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 0 Start 0 Seed ortholog score 186.0 Seed ortholog evalue 8.9e-45 Seed eggNOG ortholog 2880.D8LDT0 Preferred name HIR1 Model size 321 KEGG ko ko:K03129 KEGG Pathway ko03022,ko05016,ko05168,map03022,map05016,map05168 Hectar predicted targeting category signal peptide GOs GO:0002239,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0008150,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0012505,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0030054,GO:0031090,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043424,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0055044,GO:0071944,GO:0098588,GO:0098805 Exons 2 EggNOG free text desc. stress-induced mitochondrial fusion EggNOG OGs COG0330@1,KOG2620@2759 Cds size 321 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03021,ko03036
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462502.9829593-CDS-Ecto-sp13_S_contig10042:32..195 1681462502.9829593-CDS-Ecto-sp13_S_contig10042:32..195 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10042 33..195 + 1681462502.9972544-CDS-Ecto-sp13_S_contig10042:821..979 1681462502.9972544-CDS-Ecto-sp13_S_contig10042:821..979 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10042 822..979 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10042.65.1
>prot_Ecto-sp13_S_contig10042.65.1 ID=prot_Ecto-sp13_S_contig10042.65.1|Name=mRNA_Ecto-sp13_S_contig10042.65.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
VACPLFLSFFRVQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFS back to top mRNA from alignment at Ecto-sp13_S_contig10042:33..979+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10042.65.1 ID=mRNA_Ecto-sp13_S_contig10042.65.1|Name=mRNA_Ecto-sp13_S_contig10042.65.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=947bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10042:33..979+ (Ectocarpus species13 EcNAP12_S_4_19m)GTGGCGTGTCCTCTCTTTCTTTCTTTTTTCCGCGTGCAGGTGAAGGCGGC
TGAGGCAGAGGCAGAGTCCAAGTACCTGTCCGGCGTGGGTGTGTCCAGGC
AGCGCAAGGCCATCGTGGACGGTCTCCGCGACTCCGTGCAGACCTTCTCC
GAAACCATCGACG GTGGGTTTTGGGTCACGTTATCGGAGCACACAAGAGC
CCGCACACAAGGGCGTTCTTATGGTAGAGCATGTTCGTCTGTTGACGCAG
CTGTTGGCGTCCGGGGGTGGGATTGGTGGCGCGGTGGTAGTAGCCGTTGC
GCTTGGAAGAAGTGTCGTTTCCCCGCGTGTTCTGTTTTCATGTCGCCTTT
TGTGTCGACTCGGTTTTCGTCCCGACCTGCGAAGGCGTTGTCTTTTGCTG
TCTTGGTTGGTGGGCTTTTTTGCGTAGCCTGCCCAAGGGGTTGGCATGCC
GGATCCCCTCACGCCCGTCATATAAGAGTGTTAGGTTGGGACCGAGGAGT
TGCGCCTACATATGCGCCGTGGTGGTTGCGGGAAACACGCGCAAAATCGC
TTCTTCCTTCGACTACTTGGGCTTTAGCTGCACAGAGCTAAGAATGCGTG
CTCATTGCTTTTTAGGAGCAAAATAAACGTCAAGGTTTTTTATCCTCCCC
CTCCGTTGCTTCTCTGCAGGAACTATCCTGTTGCCTCTTCCCTCCTCCGC
TTTGGCTTCATCTTTTTTTATTGCGTTTTTTTGGCACGGACGTTGACCGG
AATTTTTTTGCCCTCTCGTCCTGCATGTCATTGCTGCAGGGACTTCGCCG
AAGGATGTAATGGATCTGCTTCTCCTGACCCAGTACTTCGACATGCTCCG
CGACGTGGGCCAGTCCTCCCGCGCGGCGACGGTGTTCCTGCCTCACGCGC
CGCAGTCTGTGGCCTCCTTGCAGGGCGCCATGCGCGATGGCTTCATG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10042:33..979+
>mRNA_Ecto-sp13_S_contig10042.65.1 ID=mRNA_Ecto-sp13_S_contig10042.65.1|Name=mRNA_Ecto-sp13_S_contig10042.65.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=321bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10042:33..979+ (Ectocarpus species13 EcNAP12_S_4_19m) back to top