mRNA_Ecto-sp13_S_contig19887.6459.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 343 bits (879), Expect = 1.470e-116 Identity = 170/254 (66.93%), Postives = 198/254 (77.95%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KLR+AL++RA EI+A RNP A G+ PI GE LT+EQL SV +VF ELGNM QTPVQHEMP+ET+LEK GA+DARI+TG K E FTLCLAV + KVPLR IFKGTP IPP PGKGK QP K SIA E+ P NRSK G+PV GMS GVQEKSWCD+REC LW+ +W LRPN+ S+ KQRP ILVLD+F+CH+D FIA+ +R+ NT I IPGGL PLLQPLDRMLNK+MK L+RG YT Y
Sbjct: 1 MAWATLMKLREALVERADEIYARRNPPAPGESPIKGEDLTSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATGGKE-KERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 340 bits (871), Expect = 5.370e-113 Identity = 171/254 (67.32%), Postives = 199/254 (78.35%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KLR+AL++RAGEI+A R+P A + PI GE LT EQLASV +VF+ELGNM QTPVQHEMP+ETTLEK GA+DARISTG K E FTL LAVMA+G KV RIIFKGTPFIPP GKGK P K S+A EI P NR+K HP +GMS GVQEKSW D RECN W+S +W LRPN+ SI +QRP ILVLD+F+CH+D+ +IA +R NT I+IPGGL PLLQPLDRMLNKQMK L+RG+YTAY
Sbjct: 63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKE-KERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 315
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 339 bits (870), Expect = 3.410e-112 Identity = 172/254 (67.72%), Postives = 198/254 (77.95%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KLR+AL+KRAGEI+A R+P A + PI GE LT+EQLASV +VFEELGNM QTPVQHE+P+ETTLEK GA+DARISTG K E FTL LAVMA+G KV RIIFKGTPF PPT GKGK P K S+A EI P NR+K GHP +GMS GVQEKSW D RECN W+S +W LRPN+ SI +QRP ILVLD+F+CH+D+ FIA +R NT I IPG L PLLQPLDRMLNKQMK L+R +YTAY
Sbjct: 63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKE-KERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAY 315
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 348 bits (894), Expect = 4.970e-109 Identity = 172/254 (67.72%), Postives = 200/254 (78.74%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KLRKALL+RAGEI+A+R P A G+ PI GE L++ QL V +++FEELGNM QTPVQHEMP+ETTLE GA+DARI+TG K E FTLCLAV A+G KVPLRIIFKGTPF+PP TPGKGK QP K SIA E+ P NRSK G PV GMS GVQEKSWCD+REC LW+ +W LRPN+ SI +QR ILVLD+F+CH+D FIA +R+ NT I IPGGL PL QPLDRMLNKQMK L+RG YTA+
Sbjct: 217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKE-KERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAH 469
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 335 bits (860), Expect = 4.250e-108 Identity = 166/254 (65.35%), Postives = 196/254 (77.17%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KL +AL+KRAGEI+A R+P A + PI GE L +EQLASV +VFEE+GNM Q PVQHEMP+ETTL+K GA+DARISTG + E FTL LAV A+G KV RIIF+GTPFIPPT GKGK +P K +A E+ P NR+K GHP +GMS GVQEKSW D RECN W+S +W LRPN+ SI +QRP ILVLD+F+CH D+ FIA +R NT I IPGGL PLLQPLDRMLNKQMK L+RG+YTAY
Sbjct: 257 MAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 510
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 328 bits (840), Expect = 4.360e-108 Identity = 165/250 (66.00%), Postives = 194/250 (77.60%), Query Frame = 1
Query: 13 IITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
++ KLR+AL+KRAGEI+A R+P A + PI GE LT+EQLASV +VFE+LGNM QTPVQHEMP+ETTLEK GA+DAR+STG + E FTL LAV A+G KV LRIIF GTPFIPPT GKGK P K S+A E+ P NR+K GHP +GMS GVQEKSW D RECN W S +W LRPN+ SI +QRP ILVLD+F+CH+D+ FIA +R NT I IPGGL PLLQPLDRMLNKQ K L+R +YTAY
Sbjct: 1 MVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEE-KERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAY 249
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 331 bits (849), Expect = 1.120e-107 Identity = 168/279 (60.22%), Postives = 201/279 (72.04%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEK-------------------------SHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KLRKALL+RAGEI+A+R P A G+ PI GE L++ QL V +++F++LGNM QTPVQ+EMP+ETTLEK GA+DARI+TG E FTLCLAV A+G+KVPLRIIFKGTPF+PP TPGKGK QP K SIA E+ P NRSK G PV GMS GVQEKSWCD+RE LW+ +W LRPN+ S+ +QR ILVLD+F+CH+D FIA +R+ NT I IPGGL PLLQPLDRMLNKQMK L+RG YTA+
Sbjct: 150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 428
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 325 bits (833), Expect = 8.180e-105 Identity = 168/262 (64.12%), Postives = 194/262 (74.05%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLL--------RPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA +TKLR+AL+KRAGEI+A R+P A + PI GE LT+EQ ASV +VFEELGNM QTPVQHEMP+ETTLE G +DARISTG K E FTL LAVMA+G V IIFKGTPFIPPT GKGK P K S+A E+ P NR+K GHP +GMS GVQEKSW +ECN W+ +W L RPN+ SI +QRP ILVLD+F+CH+D+ FIA R NT I IPGGL PLLQPLDRMLNKQMK L+RG+YTAY
Sbjct: 217 MAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKE-KERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 477
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 317 bits (811), Expect = 6.920e-102 Identity = 162/254 (63.78%), Postives = 190/254 (74.80%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRGRYTAY 762
MAWA + KLRKALL+RAG+I+A+R P A G+ PI GE L++ QL V +++FEELGNM QTPVQHE P+E L K + S E E FTLCLAV A+G KVPLRIIFKGTPF+PP TPGKGK QP K SIA E+ P NRSK G PV GMS GVQEKSWCD+REC LW+ +W LRPN+ SI +QR ILVLD+F+CH+D FIA +R+ NT I IPGGL PLLQPLDRMLNKQMK L+RG YTA+
Sbjct: 187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKRPVRRMPASPPE----ERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 435
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 328 bits (840), Expect = 2.010e-101 Identity = 166/249 (66.67%), Postives = 191/249 (76.71%), Query Frame = 1
Query: 1 MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQVFEELGNMGQTPVQHEMPMETTLEKDGAQDARISTGEKSHNEGFTLCLAVMANGSKVPLRIIFKGTPFIPPTTPGKGKRAQPLKVSIAVEIAPGNRSKFGHPVSGMSCGVQEKSWCDMRECNLWLSSNWLLRPNHESITKQRPGILVLDNFRCHRDKEFIADPERKCNTTAILIPGGLCPLLQPLDRMLNKQMKWLMRG 747
+A+A + KLR ALL+RAGEI+A RNP A+G+ PI G+ LT QL SVA +VFEELGNM QTPVQ EMP+ETTLEK G +DARISTG K + FT CLAVMA+G KVP RIIFKG PFIPP+T G+ K Q K IA E+ NR+KFG+PVSGM VQEKSWCD REC LWLS +W RPNH S+ KQR ILVLD+FRCHR + F+ D R+ NTT ILIPGGL PLLQPLDRMLNK+MK LMRG
Sbjct: 132 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDR-FTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19887.6459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19887.6459.1 >prot_Ecto-sp13_S_contig19887.6459.1 ID=prot_Ecto-sp13_S_contig19887.6459.1|Name=mRNA_Ecto-sp13_S_contig19887.6459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MAWAIITKLRKALLKRAGEIFAERNPGAAGQIPIDGEGLTAEQLASVAEQback to top mRNA from alignment at Ecto-sp13_S_contig19887:1392..2702+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19887.6459.1 ID=mRNA_Ecto-sp13_S_contig19887.6459.1|Name=mRNA_Ecto-sp13_S_contig19887.6459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1311bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19887:1392..2702+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19887:1392..2702+ >mRNA_Ecto-sp13_S_contig19887.6459.1 ID=mRNA_Ecto-sp13_S_contig19887.6459.1|Name=mRNA_Ecto-sp13_S_contig19887.6459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19887:1392..2702+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |