mRNA_Ecto-sp13_S_contig19857.6443.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: D7G933_ECTSI (Possible metalloprotease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G933_ECTSI) HSP 1 Score: 198 bits (503), Expect = 8.210e-59 Identity = 135/238 (56.72%), Postives = 147/238 (61.76%), Query Frame = 2
Query: 62 WPWKNPQGILV*RGHPTLPR----LLVPNGLQQVMVMSDPNATKAAEAMSVDVGAASDPVA-PGLAHFLEHMPFLGERTYIVQRRYAT--------EKASAARRDIRHSRGSRWRQLRRPASAPRRLPTGLSSGTRR*RSLQRSPLPLLLLPLRPPGGSSTSGSNLRRSGPSSL-----PXXXXXXXXXXXXXXXXXXXXXXXXRCRRGSSRPYPAADTQARRWRGRSPALATNGRMK 721
WPWKNPQGILV P R LL+PNGLQ VMV+SDPNA KAA AMSVDVGAA DPV PGLAHFLEHM FLG Y ++ Y + ASAARRDIR SRGSRWRQLRRPASAPRRLPT LSSG R RS +RS LPL P S+ + + +R S L P RCRRGS+RP+PAADTQA RWRGRSPALAT GR K
Sbjct: 3 WPWKNPQGILV---SPVEKRHYRWLLLPNGLQ-VMVISDPNANKAAAAMSVDVGAAPDPVGLPGLAHFLEHMAFLGTSKYPLENAYKSYLAKHGDRSNASAARRDIRLSRGSRWRQLRRPASAPRRLPTSLSSGARPQRSRRRSNLPL------PAAPSTNTVWHHQRQQSSPLRTVVPPGKSEPITPADLAPSPTSRWHPRRLRCRRGSTRPHPAADTQASRWRGRSPALATTGRTK 230
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: D7G8Z5_ECTSI (Peptidase_M16 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z5_ECTSI) HSP 1 Score: 113 bits (283), Expect = 8.990e-28 Identity = 68/95 (71.58%), Postives = 71/95 (74.74%), Query Frame = 2
Query: 35 EPLAAALEAWPWKNPQGILV*RGHPTLPR----LLVPNGLQQVMVMSDPNATKAAEAMSVDVGAASDPVA-PGLAHFLEHMPFLGERTYIVQRRY 304
EPLA ALEAWPWKNPQGILV P R LL+PNGLQ VMV+SDPNA KAA AMSVDVGAASDPV PGLAHFLEHM FLG Y V+ Y
Sbjct: 4 EPLAEALEAWPWKNPQGILV---SPMDKRHYRWLLLPNGLQ-VMVISDPNANKAAAAMSVDVGAASDPVGLPGLAHFLEHMLFLGTSKYPVENAY 94
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: A0A6H5KRX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX7_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.250e-25 Identity = 69/96 (71.88%), Postives = 72/96 (75.00%), Query Frame = 2
Query: 35 EPLAAALEAWPWKNPQGILV*RGHPTLPR----LLVPNGLQ-QVMVMSDPNATKAAEAMSVDVGAASDPVA-PGLAHFLEHMPFLGERTYIVQRRY 304
EPLAAALEAWPWKNPQGILV P R LL+PNGLQ VMV+SDPNA KAA AMSVDVGAASDPV PGLAHFLEHM FLG Y V+ Y
Sbjct: 135 EPLAAALEAWPWKNPQGILV---SPMDKRHYRWLLLPNGLQVMVMVISDPNANKAAAAMSVDVGAASDPVGLPGLAHFLEHMLFLGTSKYPVENAY 227
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: D7G8Z3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z3_ECTSI) HSP 1 Score: 105 bits (263), Expect = 2.050e-22 Identity = 78/146 (53.42%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 289 STKAIRHRKSVGGPKGHKALAGESVAATATTSISAATTADRTIKRHKTVKKPSKKPASAVAAPFTTAGWQQHQRQQSPPLRTVFPPVKSELVTTADLAPSPTPAVAPASPSLSKR*QPAVPGRRHPSQEVARKEPRPRHQRKDEDA 726
S + + + GPKGHK GESVAAT TTSIS+ TTAD+ IKR KT KK L PP KSE +T A LA S T AVAPASPSLSKR QPA PGRR+ SQ+VARKEPR RHQRKDE A
Sbjct: 51 SIRCVYSTRQKSGPKGHK-TPGESVAATVTTSISSTTTADKPIKRCKTSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTVPPGKSEPITPAALALSATAAVAPASPSLSKRQQPAAPGRRYASQQVARKEPRLRHQRKDEAA 195
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: A0A6H5JWH9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH9_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 1.410e-14 Identity = 47/59 (79.66%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 565 TTADLAPSPTPAVAPASPSLSKR*QPAVPGRRHPSQEVARKEPRPRHQRKDEDAKKIPA 741
T ADLAPSPT VAPASPSLSK Q A PGRRHPSQ+VARKEPRPRH RKD D K+IPA
Sbjct: 135 TPADLAPSPTAPVAPASPSLSKGQQLAAPGRRHPSQQVARKEPRPRHHRKDADGKEIPA 193
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: A0A836CLR7_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.090e-9 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 2
Query: 50 ALEAWPWKNPQGILV*R-GHPTLPRLLVPNGLQQVMVMSDPNATKAAEAMSVDVGAASDP-VAPGLAHFLEHMPFLGERTYIVQRRY 304
AL +WPW+ QG+L H + + NGL+ V+++ D A KAA AM+V+VGAASDP + PGLAHF EHM FLG Y + Y
Sbjct: 245 ALASWPWRTEQGLLKSSLDHRDYKYVTLCNGLK-VLLVHDHKADKAAAAMAVNVGAASDPDLMPGLAHFCEHMLFLGTGKYPTENAY 330
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: A0A6H5K1X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X2_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.970e-8 Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 628 KR*QPAVPGRRHPSQEVARKEPRPRHQRKDEDAKKIPA 741
KR QPA PGRRHPSQEVARKEPRPRH RKDED K+IPA
Sbjct: 2 KRQQPAAPGRRHPSQEVARKEPRPRHHRKDEDGKEIPA 39
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: A0A7S2XZ77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ77_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.610e-8 Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 2
Query: 62 WPWKNPQGILV*RGHPTLPRLL-VPNGLQQVMVMSDPNATKAAEAMSVDVGAASDPV-APGLAHFLEHMPFLGERTYIVQRRY 304
W W N QG+LV ++ + NG++ V+V SDP KAA +++V GA SDP PGLAHF EHM FLG T+ V Y
Sbjct: 15 WTWTNGQGVLVSPQDDRKYKVFKLDNGIEGVLV-SDPKTKKAAASLAVGAGAGSDPSDIPGLAHFCEHMLFLGTETFPVTNAY 96
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: L1IPS8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IPS8_GUITC) HSP 1 Score: 61.6 bits (148), Expect = 3.090e-7 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 2
Query: 125 LVPNGLQQVMVMSDPNATKAAEAMSVDVGAASDPVA-PGLAHFLEHMPFLGERTYIVQRRYAT 310
++PNGL+ V+ +SDP A +AA +M V VG+ SDP A PGLAHFLEHM F+G + Y + +Y++
Sbjct: 12 ILPNGLK-VLTVSDPTADRAAASMDVSVGSFSDPEAFPGLAHFLEHMLFMGSKKYPDENQYSS 73
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Match: A0A226DHR3_FOLCA (Insulin-degrading enzyme n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DHR3_FOLCA) HSP 1 Score: 58.2 bits (139), Expect = 4.440e-7 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 2
Query: 122 LLVPNGLQQVMVMSDPNATKAAEAMSVDVGAASDPVA-PGLAHFLEHMPFLGERTY 286
+L+PNG++ ++V SDPN TKAA A+SV VG+ +DP G+AHFLEHM FLG + Y
Sbjct: 59 VLLPNGMKVILV-SDPNTTKAAAALSVSVGSINDPDDFLGMAHFLEHMLFLGSQKY 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19857.6443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19857.6443.1 >prot_Ecto-sp13_S_contig19857.6443.1 ID=prot_Ecto-sp13_S_contig19857.6443.1|Name=mRNA_Ecto-sp13_S_contig19857.6443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp MVMSDPNATKAAEAMSVDVGAASDPVAPGLAHFLEHMPFLGERTYIVQRRback to top mRNA from alignment at Ecto-sp13_S_contig19857:1353..3225- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19857.6443.1 ID=mRNA_Ecto-sp13_S_contig19857.6443.1|Name=mRNA_Ecto-sp13_S_contig19857.6443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19857:1353..3225- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19857:1353..3225- >mRNA_Ecto-sp13_S_contig19857.6443.1 ID=mRNA_Ecto-sp13_S_contig19857.6443.1|Name=mRNA_Ecto-sp13_S_contig19857.6443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19857:1353..3225- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |