mRNA_Ecto-sp13_S_contig19836.6430.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19836.6430.1
Unique NamemRNA_Ecto-sp13_S_contig19836.6430.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: D8LE67_ECTSI (Protein MAK16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE67_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 9.540e-137
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 1 
Query:    1 SDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTEAEDEYAERNPEAMEE 615
            SDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL EAEDEYAE+NPEAMEE
Sbjct:    3 SDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMEAEDEYAEQNPEAMEE 207
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: A0A835ZFG7_9STRA (Protein MAK16 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG7_9STRA)

HSP 1 Score: 296 bits (759), Expect = 6.000e-98
Identity = 147/195 (75.38%), Postives = 172/195 (88.21%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTEAEDEYA 588
            D+VIW V+N+QFC+FK+KIAKEQTFCRN YN TGLCN+ SCPLANSRYATI+EHDGVCYLY+K+IERAH+PKNLWEKIKL RNY +ALE VS +L++FPK+LQH++KQRLTKIHQYLIRMRKLKLKA+PKLV IN KVE+RE         AA L+RSIE ELLERLK+GTYGDIYNFPEVQY KAL +AE+E++
Sbjct:    4 DEVIWSVINHQFCAFKAKIAKEQTFCRNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFS 198
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: A0A067C7V2_SAPPC (Protein MAK16 homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C7V2_SAPPC)

HSP 1 Score: 276 bits (706), Expect = 2.180e-90
Identity = 135/193 (69.95%), Postives = 166/193 (86.01%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTEAEDE 582
            D+VIW V++ QFCSFKSK+ +   FCRNEYNVTGLCN+ SCPLANSRYATIREH+GVCYLY+KTIERAH+PKNLWEK+KLS+NY K+LE++  +++F+PK L HR+KQRLTKIHQYL+RMRKL+LK KP LV IN K+E+RE  RE+KA  AAKL+ SIE ELL+RL+KGTYGDIYNFPE ++ K L + E+E
Sbjct:    4 DEVIWGVISNQFCSFKSKLREGAMFCRNEYNVTGLCNRQSCPLANSRYATIREHNGVCYLYMKTIERAHSPKNLWEKVKLSKNYTKSLEQIDAQMQFWPKKLIHRNKQRLTKIHQYLMRMRKLRLKTKPNLVVINKKIERREARREEKAKTAAKLDSSIEKELLQRLQKGTYGDIYNFPEREFAKVLDDNEEE 196
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: A0A4D9D3B1_9STRA (Protein MAK16 homolog n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3B1_9STRA)

HSP 1 Score: 276 bits (707), Expect = 4.590e-90
Identity = 142/191 (74.35%), Postives = 164/191 (85.86%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKI-AKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKA-KPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTE 570
            D++IWQ++N+QFCSFKSK+ AKE TFCRN YNVTGLC +S+CPLANSRYATIRE +G CYL +KT ERAHTP  LWEKI+L  NY KALE+VS ELE+FPK+LQHR+KQRLTKIHQYLIRMRKLKLKA KPKLV I+ KV++REK RE KAL AAKLE++IE ELL RL++GTYGDIYNFPE  Y K L E
Sbjct:    5 DEIIWQIINHQFCSFKSKLNAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEELEYFPKYLQHRNKQRLTKIHQYLIRMRKLKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDE 195
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: W7TVF8_9STRA (Protein MAK16 homolog n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVF8_9STRA)

HSP 1 Score: 273 bits (699), Expect = 6.390e-89
Identity = 141/191 (73.82%), Postives = 163/191 (85.34%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKI-AKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKA-KPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTE 570
            D++IWQ++N+QFCSFKSKI AKE TFCRN YNVTGLC +S+CPLANSRYATIRE +G CYL +KT ERAHTP  LWEKI+L  NY KALE+VS  LE+FPK+LQHR+KQRLTKIHQYLIRMR+LKLKA KPKLV I+ KV++REK RE KAL AAKLE++IE ELL RL++GTYGDIYNFPE  Y K L E
Sbjct:    5 DEIIWQIINHQFCSFKSKINAKEHTFCRNPYNVTGLCLRSACPLANSRYATIREEEGHCYLLLKTAERAHTPAKLWEKIRLPSNYAKALEKVSEALEYFPKYLQHRNKQRLTKIHQYLIRMRELKLKANKPKLVGIHKKVDRREKKREAKALAAAKLEQNIEKELLARLRQGTYGDIYNFPETTYHKVLDE 195
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: A0A1V9YTR0_9STRA (Protein MAK16 homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTR0_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.060e-88
Identity = 133/191 (69.63%), Postives = 162/191 (84.82%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTEAE 576
            D+VIW V++ QFCSFKSK+ +   FCRNEYNVTGLCN+ SCPLANSRYATIREH+GVCYLY+KTIERAH+PKNLWEK+KLS+NY K+L ++  +++F+PK + HR+KQRLTKIHQYL+RMRKL+LK KP LV IN K+E+RE  RE+KA  AAKL+ SIE ELL RL+KGTYGDIYNFPE ++ K L E E
Sbjct:    4 DEVIWGVISNQFCSFKSKLREGAMFCRNEYNVTGLCNRQSCPLANSRYATIREHNGVCYLYMKTIERAHSPKNLWEKVKLSKNYTKSLAQIDEQMQFWPKKMIHRNKQRLTKIHQYLMRMRKLRLKTKPNLVVINKKIERREARREEKAKTAAKLDSSIEKELLARLQKGTYGDIYNFPEKEFVKVLDENE 194
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: A0A3F2RF83_9STRA (Protein MAK16 homolog n=6 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RF83_9STRA)

HSP 1 Score: 271 bits (692), Expect = 5.010e-88
Identity = 134/188 (71.28%), Postives = 160/188 (85.11%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKI-AKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL 564
            D+VIW V++ QFCSFKSK+      FC N YNVTGLCN+S+CPLANSRYATIREHDGVCYLY+KTIERAHTP  LWE++KLS+NY K+L ++  +L+F+PK L H++KQRLTKIHQYL+RMRKL LK KPKLV IN K+E+REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++ K L
Sbjct:    4 DEVIWGVISKQFCSFKSKLPGTGNMFCSNPYNVTGLCNRSACPLANSRYATIREHDGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKLIHKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPESEFSKVL 191
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: F0XYH3_AURAN (Ribosomal_L28e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYH3_AURAN)

HSP 1 Score: 262 bits (670), Expect = 7.750e-86
Identity = 132/193 (68.39%), Postives = 159/193 (82.38%), Query Frame = 1 
Query:    1 SDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTEAED 579
            +D++IWQ +N  FCSFKS ++K   FCRNE NVTGLCNKS+CPLANSRYATIRE +G CYL IKTIERAH PK LW+KIKL RNY KAL  V+ ELE FPK LQHR+KQRLT+I+QYLIRMRKL L+++P +  ++ KVE+RE  +E KALVAAKL +SIE ELL+RLK+GTYGDIYNFPE+ Y+ AL  A+D
Sbjct:    1 NDELIWQSLNGNFCSFKSTVSKTHNFCRNEQNVTGLCNKSACPLANSRYATIREIEGRCYLMIKTIERAHMPKKLWQKIKLPRNYAKALAVVTEELEHFPKFLQHRNKQRLTRIYQYLIRMRKLALRSRPHMAVVHKKVERRENRKEVKALVAAKLNKSIESELLQRLKQGTYGDIYNFPEMHYNAALDSAQD 193
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: H3HCF7_PHYRM (Protein MAK16 homolog n=14 Tax=Phytophthora TaxID=4783 RepID=H3HCF7_PHYRM)

HSP 1 Score: 264 bits (675), Expect = 1.060e-85
Identity = 132/188 (70.21%), Postives = 158/188 (84.04%), Query Frame = 1 
Query:    4 DDVIWQVVNYQFCSFKSKI-AKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL 564
            D+VIW V++ QFCSFKSK+      FC N YNVTGLCN+SSCPLANSRYATIRE DGVC+L++KTIERAHTP  LWE++KLS+NY KAL ++  +L+F+PK L H++KQRLTKIHQYL+RMRKL LK KPKLV IN K+E+REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++   L
Sbjct:    4 DEVIWGVISKQFCSFKSKLPGTGNMFCSNAYNVTGLCNRSSCPLANSRYATIREEDGVCFLFMKTIERAHTPNRLWERVKLSKNYTKALAQLDEQLQFWPKKLVHKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSSVL 191
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BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Match: A0A7S3QN91_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QN91_DUNTE)

HSP 1 Score: 265 bits (677), Expect = 1.290e-85
Identity = 134/196 (68.37%), Postives = 167/196 (85.20%), Query Frame = 1 
Query:    1 SDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALT--EAEDE 582
            +D++IWQV+N+  CSFK+K  + Q FCRNEYNVTGLCN+SSCPLANSRYATIREHDG  YLY+KTIERAH+PKNLW++IKL +NY +ALE++ + L+F+PK L H++KQRLTKI QYLIRMRKL+LKAKP+LVT+  + EKREK RE+KA+ AA+L+R+IE ELL+RL+ GTYGDIYNFP  QY+K L   E EDE
Sbjct:    3 NDEIIWQVINHHHCSFKAK-TQVQNFCRNEYNVTGLCNRSSCPLANSRYATIREHDGKSYLYMKTIERAHSPKNLWQRIKLKKNYQQALEQIDKHLQFWPKFLVHKNKQRLTKITQYLIRMRKLELKAKPELVTMPARTEKREKRREQKAVTAARLDRAIESELLKRLQAGTYGDIYNFPLKQYEKVLDTQEVEDE 197
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19836.6430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE67_ECTSI9.540e-13799.02Protein MAK16 homolog n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835ZFG7_9STRA6.000e-9875.38Protein MAK16 homolog n=1 Tax=Tribonema minus TaxI... [more]
A0A067C7V2_SAPPC2.180e-9069.95Protein MAK16 homolog n=4 Tax=Saprolegniaceae TaxI... [more]
A0A4D9D3B1_9STRA4.590e-9074.35Protein MAK16 homolog n=1 Tax=Nannochloropsis sali... [more]
W7TVF8_9STRA6.390e-8973.82Protein MAK16 homolog n=1 Tax=Nannochloropsis gadi... [more]
A0A1V9YTR0_9STRA2.060e-8869.63Protein MAK16 homolog n=1 Tax=Thraustotheca clavat... [more]
A0A3F2RF83_9STRA5.010e-8871.28Protein MAK16 homolog n=6 Tax=Phytophthora TaxID=4... [more]
F0XYH3_AURAN7.750e-8668.39Ribosomal_L28e domain-containing protein (Fragment... [more]
H3HCF7_PHYRM1.060e-8570.21Protein MAK16 homolog n=14 Tax=Phytophthora TaxID=... [more]
A0A7S3QN91_DUNTE1.290e-8568.37Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19836contigEcto-sp13_S_contig19836:7..2368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score401.4
Seed ortholog evalue2.7e-109
Seed eggNOG ortholog2880.D8LE67
Preferred nameMAK16
Model size645
KEGG rclassRC00020,RC02814,RC02821
KEGG koko:K01738,ko:K14831,ko:K19984
KEGG ReactionR00897,R03601,R04859
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00021
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
Exons5
EggNOG free text desc.maturation of LSU-rRNA
EggNOG OGsCOG5129@1,KOG3064@2759
Ec32 ortholog descriptionMak16 protein
Ec32 orthologEc-00_001130.1
EC2.5.1.47
Cds size645
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463000.5309827-CDS-Ecto-sp13_S_contig19836:6..931681463000.5309827-CDS-Ecto-sp13_S_contig19836:6..93Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19836 7..93 -
1681463000.5443873-CDS-Ecto-sp13_S_contig19836:449..5931681463000.5443873-CDS-Ecto-sp13_S_contig19836:449..593Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19836 450..593 -
1681463000.5541801-CDS-Ecto-sp13_S_contig19836:813..9871681463000.5541801-CDS-Ecto-sp13_S_contig19836:813..987Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19836 814..987 -
1681463000.563741-CDS-Ecto-sp13_S_contig19836:1525..16821681463000.563741-CDS-Ecto-sp13_S_contig19836:1525..1682Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19836 1526..1682 -
1681463000.5730464-CDS-Ecto-sp13_S_contig19836:2285..23681681463000.5730464-CDS-Ecto-sp13_S_contig19836:2285..2368Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19836 2286..2368 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19836.6430.1prot_Ecto-sp13_S_contig19836.6430.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19836 7..2368 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19836.6430.1

>prot_Ecto-sp13_S_contig19836.6430.1 ID=prot_Ecto-sp13_S_contig19836.6430.1|Name=mRNA_Ecto-sp13_S_contig19836.6430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
SDDVIWQVVNYQFCSFKSKIAKEQTFCRNEYNVTGLCNKSSCPLANSRYA
TIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFP
KHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKA
LVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALTEAEDEYAERNP
EAMEEEEEEEEQEGE
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mRNA from alignment at Ecto-sp13_S_contig19836:7..2368-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19836.6430.1 ID=mRNA_Ecto-sp13_S_contig19836.6430.1|Name=mRNA_Ecto-sp13_S_contig19836.6430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2362bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19836:7..2368- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGATGACGTGATCTGGCAGGTGGTCAACTACCAGTTCTGCTCTTTCAA
GAGCAAGATCGCGAAGGAGCAGACGTTCTGCAGGTCCGTGCAGCGCACTG
CTTGCTGCCCTCCGTAGCCCTCTGGTGGATTTTTTTTTTGTGCTTTTGTC
GTCACATTAAAAACTGTTTCGATCTCTCTACTTGGATCTGTCCGTACTGA
CGTGTAGCAAAATTGAGTGCCTCATGGACCCGGGACGTCGAAAAAGAGGG
CTGCGGTGGTGAACAGATCTTTCACAGCAGTTTGGGGAAGCTATCATATA
TGTTATCATCCGAAGCCGACGGCGGTGCTTCCATCTTCCATGATCCTCCA
TGTACGGTTTGCCTACAGCACGGCAACATGCTGCTACAATACAAAACGTG
AAGCAAACACGTGAATCGTGTGCGTCTTGGGAACTAGTCTGCTTCGCCTG
CCAGAGGCAGATTATCCTTCAAAGCGTCCCATCATACTGCTGCCCGCCTC
GCTGTTTGCGCCGATAGCTGTCGAAGCAAGCGTCGGCTGGAGCCTCCCAC
GCATTCCAGTGTACCGCTTTCTGAACGCCAGCAATCCATCACTATCTTCC
TTTCCTTGGTATAATAGCCTGCGTGGTTCATGTGGTGTTTACAGTGTCTC
CTGTTGGCATTCGTGTCTTCGTTGAACGTATGCTAGGAACGAGTATAATG
TGACCGGGCTCTGCAACAAGAGCTCGTGCCCCCTGGCCAACTCTCGGTAC
GCCACCATCCGAGAGCACGATGGCGTGTGCTACCTGTACATCAAGACCAT
CGAGCGCGCACACACGCCGAAGAACCTCTGGGAGAAGATCAAGGTGGGAA
ATGCACTTTGCGAGAGAGATGCCATACGTGTATGCTTCGGATCGCAATTA
ACCAAAGCGGGAAGAGAAAGGCGCGCCAAGTGACTGATATTGCCCCGTTG
TCCATCCATTCGTGCGGAACATGAAGCATTGCTTGAGGACACATTCTCTC
CTGGTTGTTGTACGCCGCAGTCTCTGCATGCCTGACAGATCCGGGGCACA
CGCGCCTGTCAGAGCTCCTTACTGGGTTCTGTTTAGAATCCCTCGCTTTC
CGCACATGCGAGGCCCTGCATCGGAAATCTTTTCGGTGGAGAAGCAAGCT
CAAAGGGTGAATAGAACCCGCCAGAGGTGCTTGACAATGGGGATATTCTG
ACGACGAGAAGAACAGATCATACATCGTTGAAAAATGACGGTGCGCGTTG
GTGCGTCGGTTCTTGCGTGATGGTGGCTCCTACATGACCGAAACCCGCGG
GTCTCTGTCCGAAACCTGTGTACCCTTTGTCGTTTGGTTCTCCTTTGCCG
TTGTTGTTGCTCTTCGGACACGTGAGGATAGCTGTCCCGCAACTACGGCA
AGGCGTTGGAGCGTGTTTCTCGAGAGCTGGAGTTCTTCCCGAAGCACTTG
CAGCACAGGAGCAAGCAGCGCCTGACCAAGATCCACCAGTACCTCATCAG
GATGCGCAAGCTTAAGCTCAAGGCTAAGCCGAAGCTCGTCACCATCAACC
CCAAGGTGTGTGCTTACTCAGAGGCAGTGAGAGACCTACCTCTTCCTTTT
CTCCTTGCCAGTAACCATGTTTTTGCGTTTCCGCAACGAGGGATTTTTAC
GTCATCAGTGGCGCTTCTCTCCCCTTTCGAGGGCGAGACCCATCCCGCTT
TTACTGTAGATGCTTGGGAGTAGGGAATATTTGTGCGTGTTGGTCTAACT
GACAAGGTGTTTGTTCGTGTTTTAGGTGGAGAAACGCGAGAAGATGAGAG
AGAAGAAGGCGTTGGTGGCGGCTAAGCTAGAGCGGTCGATCGAGGGGGAA
CTGCTGGAGCGGCTGAAGAAGGGTACCTACGGCGACATTTACAACTTCCC
GGAGGTCCAGTACGATAAGGTGAGTTGTTGTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTATATCGTCGTTGAAGTTCCTTCTTGTTGGACGAAGGAGA
TAATGACGATGACGACACAAGTACGTGGTGGCGCCTATCGCTCCCATTGC
TATTATGTTGCAGGAGGTTATTTTCTGATTGATGCCTGTCGTGGTACAGG
TGTTTATGACGTCAGCATCCTTTCACCAGAAGCCGTCTGTCTTCCAGCAC
TTTCAGGGAGAGCCTTGACCCTTAGCTTACAAACAGGGAAGAACGAGTTC
GGGCACTCCGCGTTTCATTATAATGTTTTCTCGCTATGCTCAATAAGGTA
CAATGTACAATGACCGTCCAAACAGGCGCTGACGGAGGCGGAGGACGAGT
ACGCGGAGCGAAACCCAGAGGCGATGGAGGAAGAGGAGGAGGAAGAGGAG
CAGGAGGGAGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19836:7..2368-

>mRNA_Ecto-sp13_S_contig19836.6430.1 ID=mRNA_Ecto-sp13_S_contig19836.6430.1|Name=mRNA_Ecto-sp13_S_contig19836.6430.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19836:7..2368- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGATGACGTGATCTGGCAGGTGGTCAACTACCAGTTCTGCTCTTTCAA
GAGCAAGATCGCGAAGGAGCAGACGTTCTGCAGGAACGAGTATAATGTGA
CCGGGCTCTGCAACAAGAGCTCGTGCCCCCTGGCCAACTCTCGGTACGCC
ACCATCCGAGAGCACGATGGCGTGTGCTACCTGTACATCAAGACCATCGA
GCGCGCACACACGCCGAAGAACCTCTGGGAGAAGATCAAGCTGTCCCGCA
ACTACGGCAAGGCGTTGGAGCGTGTTTCTCGAGAGCTGGAGTTCTTCCCG
AAGCACTTGCAGCACAGGAGCAAGCAGCGCCTGACCAAGATCCACCAGTA
CCTCATCAGGATGCGCAAGCTTAAGCTCAAGGCTAAGCCGAAGCTCGTCA
CCATCAACCCCAAGGTGGAGAAACGCGAGAAGATGAGAGAGAAGAAGGCG
TTGGTGGCGGCTAAGCTAGAGCGGTCGATCGAGGGGGAACTGCTGGAGCG
GCTGAAGAAGGGTACCTACGGCGACATTTACAACTTCCCGGAGGTCCAGT
ACGATAAGGCGCTGACGGAGGCGGAGGACGAGTACGCGGAGCGAAACCCA
GAGGCGATGGAGGAAGAGGAGGAGGAAGAGGAGCAGGAGGGAGAG
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