prot_Ecto-sp13_S_contig19780.6401.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19780.6401.1
Unique Nameprot_Ecto-sp13_S_contig19780.6401.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19780.6401.1 vs. uniprot
Match: A0A6H5KTE9_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE9_9PHAE)

HSP 1 Score: 556 bits (1434), Expect = 9.850e-193
Identity = 304/343 (88.63%), Postives = 316/343 (92.13%), Query Frame = 0 
Query:    1 MMVNISRGNVDPVTGEAVTAETFPASRAAGARRAETHQPRPSCSGQRRSIAHSDRPRSATMPTTTPSGSKNKRNESRGARPSTQQGQRQGRDWRGREAQASAGKRGGSGGGGLLKDMFERARSRAEEEKENFFSQQKTRYTAPGLQDVSEIVLACGSGPTPGRRGRVADSSSTPTAAPNPFARKPGASAAARVGAASFHTPDALTAVDTRLRGYADALRPTVYGGGDPDAWSRLSKGCLTACARKDGGEDTCSATRGAAHAVGEGHKDCGARRAAATPSGAVSAAADFAGVTPAAPKRPLSRGVSGSSRGKKAKLGVGGKVGSPRKGATMLSFFGRAAAVSKR 343
            MMVNISRGNVDPVTGEAVTAETFPAS AAG RRAETHQPRPSCSGQRRSIA SDRPRSAT+ TTTPSGS+N+R+ESRGARPSTQQGQ+QGRDWRGREAQASAGKRGGSGGG LLK+MFERARSRAEEE+ENF SQQKTRY+APGLQDVSEIVLACGSGPTPGRRGRVADSSSTPTAAPNPFARKPG SAAAR GAASFHTPDALTA DTR RG   ALRPT YGGGDPDAWSRLSKGCLTACA+K+ GEDT SATRGAAHAVGE  KDCGARRAA  PSGA SAAA+FAG+TP APKRPLSRG SGS RGKKAKLGVG K G PRKGATMLSFFGRAAAVSKR
Sbjct:  365 MMVNISRGNVDPVTGEAVTAETFPASGAAGFRRAETHQPRPSCSGQRRSIAPSDRPRSATVRTTTPSGSQNQRSESRGARPSTQQGQKQGRDWRGREAQASAGKRGGSGGGRLLKEMFERARSRAEEEEENFSSQQKTRYSAPGLQDVSEIVLACGSGPTPGRRGRVADSSSTPTAAPNPFARKPGGSAAARAGAASFHTPDALTAADTRFRGDGVALRPTAYGGGDPDAWSRLSKGCLTACAQKERGEDTFSATRGAAHAVGESLKDCGARRAAVAPSGAASAAAEFAGITPVAPKRPLSRGGSGSGRGKKAKLGVGCKAGPPRKGATMLSFFGRAAAVSKR 707
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19780.6401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTE9_9PHAE9.850e-19388.63Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19780contigEcto-sp13_S_contig19780:121..1152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19780.6401.1mRNA_Ecto-sp13_S_contig19780.6401.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19780 103..1152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19780.6401.1 ID=prot_Ecto-sp13_S_contig19780.6401.1|Name=mRNA_Ecto-sp13_S_contig19780.6401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
MMVNISRGNVDPVTGEAVTAETFPASRAAGARRAETHQPRPSCSGQRRSI
AHSDRPRSATMPTTTPSGSKNKRNESRGARPSTQQGQRQGRDWRGREAQA
SAGKRGGSGGGGLLKDMFERARSRAEEEKENFFSQQKTRYTAPGLQDVSE
IVLACGSGPTPGRRGRVADSSSTPTAAPNPFARKPGASAAARVGAASFHT
PDALTAVDTRLRGYADALRPTVYGGGDPDAWSRLSKGCLTACARKDGGED
TCSATRGAAHAVGEGHKDCGARRAAATPSGAVSAAADFAGVTPAAPKRPL
SRGVSGSSRGKKAKLGVGGKVGSPRKGATMLSFFGRAAAVSKR*
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