prot_Ecto-sp13_S_contig19777.6399.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19777.6399.1
Unique Nameprot_Ecto-sp13_S_contig19777.6399.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19777.6399.1 vs. uniprot
Match: A0A6H5JG73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG73_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.960e-35
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 
Query:    1 MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAASAPVPGTAEATTPSVRRLPPIINR 68
            MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAA APVPGTAEATTPSVRRLPPIINR
Sbjct:    1 MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAAGAPVPGTAEATTPSVRRLPPIINR 68
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BLAST of mRNA_Ecto-sp13_S_contig19777.6399.1 vs. uniprot
Match: D8LL47_ECTSI (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL47_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.090e-33
Identity = 68/76 (89.47%), Postives = 69/76 (90.79%), Query Frame = 0 
Query:    1 MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAASAPVPGTAEATTPSVRRLPPIINRGTYTFSQC 76
            MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAA APVPGTAEATTP VRRLPPIINRG +    C
Sbjct:    1 MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAAGAPVPGTAEATTPPVRRLPPIINRGNFARVSC 76
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BLAST of mRNA_Ecto-sp13_S_contig19777.6399.1 vs. uniprot
Match: A0A425BSZ0_9PEZI (Leucine carboxyl methyltransferase 1 (Fragment) n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BSZ0_9PEZI)

HSP 1 Score: 51.6 bits (122), Expect = 9.540e-6
Identity = 32/65 (49.23%), Postives = 39/65 (60.00%), Query Frame = 0 
Query:    8 SDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAASAPVPGTAEATTPSVRRLPPIINRGTYT 72
            SDE++QAT +DAA  +LSA +LGY +DR+ E  V               P  RRLP IINRGTYT
Sbjct:   21 SDETIQATDTDAAVSRLSAVTLGYIDDRYAEYFVNG-------------PRTRRLP-IINRGTYT 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19777.6399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JG73_9PHAE3.960e-3598.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL47_ECTSI1.090e-3389.47Leucine carboxyl methyltransferase 1 n=1 Tax=Ectoc... [more]
A0A425BSZ0_9PEZI9.540e-649.23Leucine carboxyl methyltransferase 1 (Fragment) n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 5..76
e-value: 6.9E-12
score: 47.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19777contigEcto-sp13_S_contig19777:2750..2992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19777.6399.1mRNA_Ecto-sp13_S_contig19777.6399.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19777 2750..2992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19777.6399.1 ID=prot_Ecto-sp13_S_contig19777.6399.1|Name=mRNA_Ecto-sp13_S_contig19777.6399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAASAPVPG
TAEATTPSVRRLPPIINRGTYTFSQCQFNS*
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