prot_Ecto-sp13_S_contig19759.6390.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19759.6390.1
Unique Nameprot_Ecto-sp13_S_contig19759.6390.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length329
Homology
BLAST of mRNA_Ecto-sp13_S_contig19759.6390.1 vs. uniprot
Match: D8LGV9_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV9_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 8.470e-166
Identity = 304/335 (90.75%), Postives = 307/335 (91.64%), Query Frame = 0
Query:    1 DLEVSKNRRDGVKGEARFIGTNLKARSALMKAKHKALVLNKELMELMQYLDVPVGNILADSQGAPSLGDPTVDDAIANGGCGSHGSPDPNGNAXXXXXXXXXXXNSGVDSPAPSLGNEMDEVERLDATQSNSPSSGATGAEGEGTADRGPGEEDGGVATDAGAGGGDADXXXXXXXXXEEMHNTQGDE-RGSEEAPEARAQPNGTAEVCADEDQTAGRVDGGDSTRDEGNENDEEQGQLL-----SGPAAAAPHGAVRLDQGFGDEDETEFTVPPLDFGRGTRGGPGEGVDQAGGGGGALVSAAPREDNGVAEQETELLTVSELEQQMSKLEDAA 329
            DLEVSKNRRDGVKGEARFIGTNLK      KAK KALVLNKELMELMQYLDVPVGN+LADSQGAPSLGDPTVDDAIANGGCGSHGSPDPNGN XXXXXXXXXXXNSG DSPA SLGNEMDEVERLDATQ N PSSGAT AEGEGTA+ G  EEDGGVA DAGAGGGD  XXXXXXXXXEEMHNTQGDE RGSEEAP+ARAQPNGTAEVCADEDQTAGR DGGDSTRDEGNENDEEQGQLL     SGPAAAAPHGAVRLDQGFGDEDETEFTVPPLDFGRGTRGGP EGVDQAGGGGG LVSAAPREDNGVAEQETELLTVSELEQQMSKLEDAA
Sbjct:  487 DLEVSKNRRDGVKGEARFIGTNLK------KAKQKALVLNKELMELMQYLDVPVGNMLADSQGAPSLGDPTVDDAIANGGCGSHGSPDPNGNXXXXXXXXXXXXNSGADSPARSLGNEMDEVERLDATQGNGPSSGATDAEGEGTANGGSCEEDGGVAPDAGAGGGDXXXXXXXXXXXEEMHNTQGDEERGSEEAPKARAQPNGTAEVCADEDQTAGRDDGGDSTRDEGNENDEEQGQLLLEVSLSGPAAAAPHGAVRLDQGFGDEDETEFTVPPLDFGRGTRGGPAEGVDQAGGGGGTLVSAAPREDNGVAEQETELLTVSELEQQMSKLEDAA 815          
BLAST of mRNA_Ecto-sp13_S_contig19759.6390.1 vs. uniprot
Match: A0A6H5KXX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX6_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 5.510e-110
Identity = 239/383 (62.40%), Postives = 249/383 (65.01%), Query Frame = 0
Query:   32 AKHKALVLNKELMELMQYLDVPVGNILADSQGAPSLGDPTVDDAIANGGCGSHGSPDPNGNAXXXXXXXXXXXNSGVDSPAPSLGNEMDEVERLDATQSNSPSSGATGAEGEGTADRGPGEEDGGVA-------------------TDAGAGGGDADXXXXXXXXXEEMHNTQGDERGS----------------EEAPEARAQPNGTAEVCADEDQTAGRVDGGDSTRDEGNENDEEQGQLL--------------------------------------------------SGPAAAAPHGAVRLDQGFGDEDETEFTVPPLDFGRGTRGGPGEGVDQAGGGGGALVSAAPREDNGVAEQETELLTVSELEQQMSKLEDAA 329
            AK KALVLNKELMELMQYLDVPVGNILADSQGAPSLGDP+VDDAIANGGCGSHGSPDPNG  XXXXXXXXXXXNSG +SPA SLGNEMDEVERLDATQ  SPS  ATGA   G   +G G   G                       DAGAGG   D               QGD+  +                +EAP+ARAQ NGTAEVCADEDQTAGRVDG DSTRDEGNENDEEQGQLL                                                  SGPAAAAPHGAVRLDQGFGDEDETEF+VPPLDFGRGTRGGP EGV QAGGGGG LVS APREDNGVAEQETELLTVSELEQQMSK+EDA+
Sbjct:  231 AKQKALVLNKELMELMQYLDVPVGNILADSQGAPSLGDPSVDDAIANGGCGSHGSPDPNGXXXXXXXXXXXXXNSGTESPAHSLGNEMDEVERLDATQV-SPS--ATGAAAAGGGGKGNGPSSGATGXXXXXXXXXXXXXXXXXXXADAGAGGAGVDE--------------QGDDEDTXXXXXXXXXXXXXXXXKEAPKARAQLNGTAEVCADEDQTAGRVDGDDSTRDEGNENDEEQGQLLLGMERESGXXXXXXXXXGASTFGRQPLPQPASLLPPSAADDPSAGQEVSLSGPAAAAPHGAVRLDQGFGDEDETEFSVPPLDFGRGTRGGPAEGVGQAGGGGGTLVSTAPREDNGVAEQETELLTVSELEQQMSKVEDAS 596          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19759.6390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGV9_ECTSI8.470e-16690.75FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KXX6_9PHAE5.510e-11062.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 308..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19759contigEcto-sp13_S_contig19759:2..3027 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19759.6390.1mRNA_Ecto-sp13_S_contig19759.6390.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19759 2..3027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19759.6390.1 ID=prot_Ecto-sp13_S_contig19759.6390.1|Name=mRNA_Ecto-sp13_S_contig19759.6390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp
DLEVSKNRRDGVKGEARFIGTNLKARSALMKAKHKALVLNKELMELMQYL
DVPVGNILADSQGAPSLGDPTVDDAIANGGCGSHGSPDPNGNASGHGLRP
ADGNNSGVDSPAPSLGNEMDEVERLDATQSNSPSSGATGAEGEGTADRGP
GEEDGGVATDAGAGGGDADGQDDDEDTDEEMHNTQGDERGSEEAPEARAQ
PNGTAEVCADEDQTAGRVDGGDSTRDEGNENDEEQGQLLSGPAAAAPHGA
VRLDQGFGDEDETEFTVPPLDFGRGTRGGPGEGVDQAGGGGGALVSAAPR
EDNGVAEQETELLTVSELEQQMSKLEDAA
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