prot_Ecto-sp13_S_contig19750.6384.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19750.6384.1
Unique Nameprot_Ecto-sp13_S_contig19750.6384.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19750.6384.1 vs. uniprot
Match: D7FU45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU45_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 2.720e-113
Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = 0 
Query:    2 TDLRPLFVLSLCLLLDPCGSFLHSSRGVGCLRCPRLVQRSPLPRGQKLSATMSSVVAVGQGKAKREPPRLLENLEVGERLKGVVVTELDGTSGKKAWVRVGVMRRAKGGKFSHVDGMIRLNKEKGLKPKKVAIDKPVTVYVSKVIEAEGRLEVSLRAPKPLVPIVDTSTLKPLADLKRGEELTG 185
            TDLRP FVLSLCLLLDPCGSFLHSSRGVGCL CPRLVQRSPLPRGQ+LSATMSSV AVGQ KAKREPPRLLENLEVGERLKGVVVTELDGTSGKKAWVRVGVMRRAKGGKFSHVDGMIRLNKEKGLKPKKVA+DKPVTVYVSKVIEAEGRLEVSLRAPKPL PIVDTSTLKPLADLK GEELTG
Sbjct:    3 TDLRPRFVLSLCLLLDPCGSFLHSSRGVGCLPCPRLVQRSPLPRGQRLSATMSSVPAVGQKKAKREPPRLLENLEVGERLKGVVVTELDGTSGKKAWVRVGVMRRAKGGKFSHVDGMIRLNKEKGLKPKKVAVDKPVTVYVSKVIEAEGRLEVSLRAPKPLAPIVDTSTLKPLADLKHGEELTG 186
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19750.6384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU45_ECTSI2.720e-11395.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.712

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19750contigEcto-sp13_S_contig19750:523..3219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19750.6384.1mRNA_Ecto-sp13_S_contig19750.6384.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19750 523..3219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19750.6384.1 ID=prot_Ecto-sp13_S_contig19750.6384.1|Name=mRNA_Ecto-sp13_S_contig19750.6384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MTDLRPLFVLSLCLLLDPCGSFLHSSRGVGCLRCPRLVQRSPLPRGQKLS
ATMSSVVAVGQGKAKREPPRLLENLEVGERLKGVVVTELDGTSGKKAWVR
VGVMRRAKGGKFSHVDGMIRLNKEKGLKPKKVAIDKPVTVYVSKVIEAEG
RLEVSLRAPKPLVPIVDTSTLKPLADLKRGEELTG
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