mRNA_Ecto-sp13_S_contig1973.6371.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A6H5L742_9PHAE (ENDO3c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L742_9PHAE) HSP 1 Score: 692 bits (1786), Expect = 2.070e-242 Identity = 341/366 (93.17%), Postives = 349/366 (95.36%), Query Frame = 2
Query: 2 MAPAAKSSEINRKAAVAANPDPGAGKREAGAKHDISTLVMVGVPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRGLEVHLWNASELSF 1099
MA AA SSEINRKAAVAANPDPGA K EAGAK IS++VMV VPQG+SFTQAACSYGYFVVPPNLWQPCES PGL DSGTFSRPLRFG+ LVNTA+CTISLVPACG SNP QGSGGDQQAMALRVDVVSAEALTESDQEDIR QVVRMFQTTIDLAPWFRLHPEAK+RGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRIL+LAE+FRDGSVDPTWLEAPERTREEVL FVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKR LEVHLWNASE SF
Sbjct: 44 MAAAANSSEINRKAAVAANPDPGARKTEAGAKCGISSVVMVKVPQGFSFTQAACSYGYFVVPPNLWQPCESAPGLRDSGTFSRPLRFGQRLVNTAKCTISLVPACGAASNPNQGSGGDQQAMALRVDVVSAEALTESDQEDIRVQVVRMFQTTIDLAPWFRLHPEAKKRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILRLAESFRDGSVDPTWLEAPERTREEVLKFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRDLEVHLWNASEFSF 409
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A0G4H2A2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2A2_VITBC) HSP 1 Score: 236 bits (601), Expect = 2.130e-66 Identity = 129/348 (37.07%), Postives = 195/348 (56.03%), Query Frame = 2
Query: 83 EAGAKHDISTL----VMVGVPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLG-DSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFG-RSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRGLEVHLWNASELSF*VS 1108
+ + D S+L V + V + ++ CSYG+FV+ PN W C P L D G F RPLR+GE + T+++ G G + V V ++ L + +I+ Q+ RM + + + W+ LH EAK G+GRLFRSPT++EDMVK+IT CN+ + T MN+LLC++ G+FP+P D+ E L+ + +GYRA R+ KLA F DG++D W E +RT++EV L GFG +A NV L+GF E P DSETVRHF++ H V ++ ++ + K+ Y KYAPYQF+ YW+E+ +++K G++ W + +S
Sbjct: 23 DGSTQSDSSSLREVSVTIDVADDFDLAKSICSYGFFVLAPNKW--CPPPPSLSTDHGVFKRPLRYGEKGQHVCDVTLTM------------GQG------TIDVSVATSCPLDDGHLGEIKQQICRMCRVSFPIDSWWSLHSEAKSLGFGRLFRSPTLWEDMVKTITVCNVHWKRTCIMNRLLCDKVSSHMGSFPSPSDVLKFSPEWLQRECNLGYRATRLYKLASAFTDGTIDVAWWEHSDRTQQEVWDACLSLNGFGPFATNNVLQLMGFLETFPYDSETVRHFRECHKVIG-SLADITKKAKQHYAKYAPYQFVAYWFELWKGYQQKDGVDADRWEEGNAALVIS 349
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A5C5V0E5_9BACT (ENDO3c domain-containing protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5V0E5_9BACT) HSP 1 Score: 231 bits (589), Expect = 1.640e-65 Identity = 130/312 (41.67%), Postives = 178/312 (57.05%), Query Frame = 2
Query: 128 VPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTT-KNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRG 1060
VP + +A CSYGYF++ PNLW P D RPL G +V V+ P GG + + D L +DQ +RA +VRM + DLA W RL+P A++RG+GR+FRSPT+FED+VK+ITGCN+ + T+ MN+ L + GR GAFPTP L + LK+ +VGYRA RI+ LA F G+VDP W E+P R E+ + L GFG YAA N+ LLG Y+ +P+D+ET RH+ GV KN K + P + + Y+ APYQFL YW+E+ +E++ G
Sbjct: 9 VPADFELKRAVCSYGYFLLAPNLWLP--------DQQKLLRPLTLGGRIVGVG------------VTQP----GGRGAPLRVACDT----KLPRADQAAVRAALVRMLRPDEDLAAWNRLNPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTMSMNRHLTAKVGR-GAFPTPAQLARLTPSRLKQSCRVGYRAARIINLARAFERGAVDPDWFESPARETAELREALLRLEGFGPYAAANMLQLLGHYDHLPIDTETYRHYCHVTGVERPKNDKLLDPLIHERYDPLAPYQFLAYWFEIWRDYERRYG 291
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A7S0DQ45_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQ45_9EUKA) HSP 1 Score: 234 bits (598), Expect = 5.160e-65 Identity = 130/322 (40.37%), Postives = 184/322 (57.14%), Query Frame = 2
Query: 128 VPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFR--DG--SVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTK-NVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRGLEVHLW 1078
+P+ +S Q+ CSYGYF + PN W P G D G SRP R+ V A S + S P L + + + L + +++ V RM + + + + + PEAK RG+GR FRSP ++EDMVK+IT CNMK+ GT+RMN LLC G++GAFPTP+++ + + L+E K+GYRA RI +LA +G +D W EA +R REE + LYGFG +AA NV LLG++E P DSETVRHFK++H ++K ++ +K Y +APYQFL YW+E+ T +EK+RG W
Sbjct: 126 IPKDFSLAQSVCSYGYFALAPNRWTPAPHGEDE-DRGKLSRPFRYANEKVVWATIRQSGSRSSLPESPPN-----------LHITLHAPHELAIHEIQEVMDGVGRMLRVQMCVKGFHEVCPEAKDRGFGRTFRSPCLWEDMVKTITNCNMKWSGTVRMNHLLCTHVGKNGAFPTPKEVLKHKAQWLQENCKLGYRAERIRRLAACVEGIEGMEKLDLQWFEASDRKREEAFERIIKLYGFGKFAAHNVCQLLGYHESFPFDSETVRHFKEHHKASSKAKFTDIEKLARKHYSTFAPYQFLAYWFELWTAYEKRRGSTSTRW 435
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A518D820_9BACT (ENDO3c domain-containing protein n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518D820_9BACT) HSP 1 Score: 228 bits (582), Expect = 1.770e-64 Identity = 123/320 (38.44%), Postives = 194/320 (60.62%), Query Frame = 2
Query: 104 ISTLVMVGVPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTK-NVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRG 1060
+S+ + + P+G++F +A CSYGYF++ PN W+P E L +TA P +V+ PK G+G LR++ A L + ++ + RM + DL+ W RLHP+A++RG+GRLFRS ++FEDMVK+ITGCN+ + TI MN+LL E FG +GAFP+P L V E LK +AKVGYRA RI++LA+ F +GS++P W E+P+ + ++ + ++GFG YAA N+ LLG ++ +P+D+ET RH+ GV + + +++ Y++Y PYQFL YW+++ ++++ G
Sbjct: 1 MSSRLSLATPEGFAFNRAVCSYGYFLLAPNRWRPAEQA------------------LEHTA-APEGAGPTLLRVTQPK-GAGAP-----LRIEC--ATRLDRAQAGHVKQALRRMLRLDDDLSAWRRLHPKARRRGFGRLFRSASLFEDMVKTITGCNVTWRNTIVMNRLLAERFG-AGAFPSPAQLARVAPERLKAEAKVGYRAERIIQLAQRFEEGSIEPGWFESPQHSTGQLREALLAIHGFGPYAAANMLQLLGRFDHVPIDTETYRHYCLQQGVERPADAAALDAQIRAHYDRYHPYQFLAYWFDLWRDYQRRFG 292
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A5C5ZIG4_9BACT (ENDO3c domain-containing protein n=2 Tax=Pseudobythopirellula maris TaxID=2527991 RepID=A0A5C5ZIG4_9BACT) HSP 1 Score: 221 bits (564), Expect = 5.700e-62 Identity = 125/314 (39.81%), Postives = 182/314 (57.96%), Query Frame = 2
Query: 122 VGVPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTTK-NVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRG 1060
+ VP+ + F +A CSYGYF++ PNLW+P ++ + R E + R + ++ P GG + +R D L +++ +R + RM + DLA W RL+P AK+RG+GRLFRSPT+FEDMVK+IT CN+ + TIRMN+LL E G GAFPT E L L+++ +VGYRA RI+ LA F G VDP W E+P+R+ +E+ + L GFG YAA NV LG Y+ +P+D+ET RH+ G + N KE+ P ++ Y ++ PY FL YW+E+ +E++ G
Sbjct: 3 IAVPKDFDFVRAVCSYGYFLLAPNLWRP--------ETLSLLRVFDPAEGGLEGERLST-------EIDQP----GGRGAPVRVRCD----RPLAAAERAFVRRALARMLRVEDDLARWRRLNPAAKRRGFGRLFRSPTLFEDMVKTITSCNVGWTSTIRMNELLVELVGE-GAFPTAERLARWTPARLQKRCRVGYRAKRIIGLARRFDRGEVDPVWFESPQRSTDELREAILALDGFGPYAAANVLQTLGHYDHLPIDTETYRHYCHMTGRSRPANDKELDPLIEARYARFGPYPFLAYWFELWRDYERRHG 292
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A5C5YQQ2_9BACT (HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Posidoniimonas polymericola TaxID=2528002 RepID=A0A5C5YQQ2_9BACT) HSP 1 Score: 221 bits (564), Expect = 5.700e-62 Identity = 127/312 (40.71%), Postives = 173/312 (55.45%), Query Frame = 2
Query: 128 VPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTT-KNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRG 1060
VP + +A CSYGYF++ PN W+P + T RPL G V ++ P GG + + D + L + Q+ +RA V RM + DL W RL P A++RG+GR+FRSPT+FED+VK+ITGCN+ + TI MN+ L E+ G+ GAFPTP L + LK +VGYRAGRI+ LA F G VDP W E PER E+ + L G G YAA N+ LLG Y+ +P+D+ET RH+ G KN K + P + Y+ APYQFL YW+E+ +E++ G
Sbjct: 9 VPADFELKRAVCSYGYFLLAPNDWRPADQ--------TLYRPLTLGAETVGVT------------LTQP----GGPGAPLRVACDAL----LDRTAQQRVRAAVTRMLRIDEDLTDWRRLCPAARRRGFGRMFRSPTLFEDLVKTITGCNVTWRNTISMNRHLVEKVGQ-GAFPTPAQLARLTPSRLKASCRVGYRAGRIINLARAFERGDVDPDWFEHPERGTLELRERLLELKGIGPYAAANMLQLLGRYDHLPIDTETYRHYCHVTGAERPKNDKLLDPLIHARYDPLAPYQFLAYWFEIWRDYERRYG 291
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A061RIR0_9CHLO (Dna glycosylase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIR0_9CHLO) HSP 1 Score: 222 bits (566), Expect = 5.020e-61 Identity = 132/332 (39.76%), Postives = 187/332 (56.33%), Query Frame = 2
Query: 131 PQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTI-SLVPACGKVSNPKQGSGGDQQAM-----------ALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSG-AFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYE-DI-PMDSETVRHFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRGLEVHLWN 1081
P +S ++ CSYGYF + PN+W P + D G F RPL V ++ I S + + G +S P+ QQ AL + + S ALT +D E R+ + DL WF HP A RG+GR FRSPT+FEDMVK++T CN+KF TI+MN+LLC+ FG+ G AFP PEDL N EE LK A+VGYRA RI+ LA+ F ++ W E + EV+ ++ L+GFG +A NV LLG Y+ DI D+ET R + GV + + + ++ Y+++AP+QFL YW+E+ T +E++ G E W+
Sbjct: 75 PLKFSLSRTICSYGYFGLAPNMWFPADPCRDE-DEGVFLRPLTLEHFSVKRSKYFIASNLDSQGILSGPEGQRTRTQQVAYMMICQAKKQRALLLGLWSTAALTTADIEVAXKSATRILRLDQDLREWFTSHPVAAARGFGRTFRSPTLFEDMVKTVTNCNIKFKRTIQMNELLCKHFGKGGVAFPDPEDLCNQSEESLKSLARVGYRAKRIISLAKAFHARELEQDWFENSDTPTSEVVKRLRALHGFGPFATSNVLQLLGRYDGDIRAWDTETSRLMSEL-GVRPQGGESLHSAAERRYQRFAPFQFLAYWFELWTNYEERAGAEATRWS 404
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A517TMY9_9BACT (ENDO3c domain-containing protein n=1 Tax=Planctomycetes bacterium MalM25 TaxID=2527998 RepID=A0A517TMY9_9BACT) HSP 1 Score: 216 bits (549), Expect = 8.860e-60 Identity = 127/330 (38.48%), Postives = 178/330 (53.94%), Query Frame = 2
Query: 110 TLVMVGVPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLG-DSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVR-HFKDYHGVTTKNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRGLEVHLWNASEL 1093
T + + P Y F A CSYGYF++ PN W+P G D+ F P G + GG + +R D L + +R VVR+ + +DL+ W RLHP A++RG+GRL+RSPT+FEDMVK+IT CN+ + T+RMN+LL E G GAFPTP L + L+ KVGYRA RI++LA F G++DP+W E+ ER+ EEV + L GFG YAA NV LLG + +P+D+E R H K T ++ K + + YE Y P++FL YWY++ +E +RG + W E+
Sbjct: 5 TQLRIATPADYWFPAAICSYGYFLLAPNRWRPERMALQRGFDAAEFGLP--------------------AGVFATEIDQPGGRGTPLRVRCD----RPLDPEVRSALRRAVVRIGRPDLDLSRWRRLHPAARRRGFGRLYRSPTLFEDMVKTITNCNVGWPSTVRMNRLLVERVGE-GAFPTPARLARLAPSRLQRSCKVGYRAKRIVRLARGFESGAIDPSWFESTERSDEEVYEKLLTLEGFGPYAAANVMQLLGRDDVLPIDTEGYRLHEKRTGSRTPRDPKRLEAAITAHYEPYRPHRFLAYWYDLWRDYESQRG-DAWTWEPEEV 308
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Match: A0A518C028_9BACT (Uncharacterized protein n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518C028_9BACT) HSP 1 Score: 214 bits (545), Expect = 3.140e-59 Identity = 120/312 (38.46%), Postives = 170/312 (54.49%), Query Frame = 2
Query: 128 VPQGYSFTQAACSYGYFVVPPNLWQPCESGPGLGDSGTFSRPLRFGEHLVNTARCTISLVPACGKVSNPKQGSGGDQQAMALRVDVVSAEALTESDQEDIRAQVVRMFQTTIDLAPWFRLHPEAKQRGYGRLFRSPTVFEDMVKSITGCNMKFGGTIRMNKLLCEEFGRSGAFPTPEDLENVQEEDLKEKAKVGYRAGRILKLAENFRDGSVDPTWLEAPERTREEVLTFVKGLYGFGDYAAGNVAMLLGFYEDIPMDSETVRHFKDYHGVTT-KNVKEVAPRVKKEYEKYAPYQFLQYWYEMITWHEKKRG 1060
VP + +A CSYGYF++ PN W + F L + + R + QG GD +A + E + ++ ++ R+ + D W+ +H A++RG+GRLFRSPT++ED+VK+ITGCN + TIRMN+LL E GR GAFP+P + LKE KVGYRA RI+ +A F DGS+D W +PERT EV ++GL G G YAA N+ LLG Y+ + +DSET RH+ G+ N KE+ P ++ YE Y PY+FL YWY++ T +E + G
Sbjct: 15 VPSDFDLAEAVCSYGYFLLSPNHWD--------AERQVFETTLATEDSSLIAIRVS--------------QGDQGDPLVVACHRKLDRGEGVR------VKQRLGRVLRVDEDFTGWYAMHAGARRRGFGRLFRSPTLWEDIVKTITGCNTTWTSTIRMNRLLVERVGR-GAFPSPGQVRRYGAARLKEHVKVGYRAQRIVDVARGFLDGSIDAGWYASPERTAGEVYEALRGLNGIGPYAAANICQLLGHYDFLAIDSETYRHYCAVKGIERPSNDKELDPLIEAHYEGYRPYRFLAYWYDLWTAYEARVG 297 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1973.6371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1973.6371.1 >prot_Ecto-sp13_S_contig1973.6371.1 ID=prot_Ecto-sp13_S_contig1973.6371.1|Name=mRNA_Ecto-sp13_S_contig1973.6371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp MAPAAKSSEINRKAAVAANPDPGAGKREAGAKHDISTLVMVGVPQGYSFTback to top mRNA from alignment at Ecto-sp13_S_contig1973:7045..14457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1973.6371.1 ID=mRNA_Ecto-sp13_S_contig1973.6371.1|Name=mRNA_Ecto-sp13_S_contig1973.6371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7413bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1973:7045..14457- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1973:7045..14457- >mRNA_Ecto-sp13_S_contig1973.6371.1 ID=mRNA_Ecto-sp13_S_contig1973.6371.1|Name=mRNA_Ecto-sp13_S_contig1973.6371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1973:7045..14457- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |