mRNA_Ecto-sp13_S_contig10696.637.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 1597 bits (4135), Expect = 0.000e+0 Identity = 837/889 (94.15%), Postives = 854/889 (96.06%), Query Frame = 1
Query: 25 VRHDLLLVQPEQALGFLSRNTGLANMLLKGAVRSRDPSIVGAVIQLVHCTRLQQGVLDFGAFIGSGFSDWTTVVLEKSNFAQGAGGGGLDWAIGALSCLLQYPAMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPGEAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTMLLVLSSLFAPFVWHTHFFSKAQARRGRLSVGSLLVRYFIVFVWCVLRAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLEKTILTHFYAKLDSIGHDRASSNDGVHVRLARMEENLAGIRAQLDDRXXXXXXXXXXXXXXXXXXXXRLLSIVEQAVDRRNT 2691
VRHDLLLVQPEQ LGFLSRN+GLAN+L+KGAVRSRDPSIVGAVIQ VHCTRL+QGVLDFGAFIGSGFSDWTTVVLEKSNFAQGAGGGGLDWAIGALSCLLQYP MFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCS VFEPELSRED+RGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLAL+EE RRKED +SLDRCLLLDLQDKIGQEG LLDSRKI+DTLLSP LLQGANCAGLWNTA+SLTFLPGAQFT+AGLVGMPDQYYR PAMRMLLDLAVYLG+LVFFSTVVLFHEDGPL PGEAAFAFYILAG+ITEGQEM RDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAP IFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPG QY SVATALFVIY VVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYR+VVDMCLLPPPFNLVQLI+SLP+MVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGT+L VLSSLFAPFVWHTHF+SKAQARRG LSVGSLLVRY IVF WCVL APLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEG SGGLVAGDLQMYLEDPIGD EVR DERRKQTTVENIKQLRNRLEKTILTH AKLDSI DRASS DGV VRLARMEENLAGIRAQL XXXXXXXXXXXXXXXXXXX R LSIVEQAVDRRNT
Sbjct: 439 VRHDLLLVQPEQVLGFLSRNSGLANVLVKGAVRSRDPSIVGAVIQFVHCTRLEQGVLDFGAFIGSGFSDWTTVVLEKSNFAQGAGGGGLDWAIGALSCLLQYPTMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQARRGALSVGSLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKTILTHLDAKLDSIEQDRASSTDGVQVRLARMEENLAGIRAQLXXXXXXXXXXXXXXXXXXXXXXDRFLSIVEQAVDRRNT 1327
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 2.230e-139 Identity = 318/819 (38.83%), Postives = 441/819 (53.85%), Query Frame = 1
Query: 286 GLDWAIGALSCLLQYPAMFDTADLIQLSRERS-AEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALN---EE*RRKEDAKSLDRCLLLDLQDKIGQEG------------TLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLA-----------------PGEAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQ-----------VVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPI-------------------MVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTMLLVLSSLFAPFVWHTHFFSKAQARRG------RLSVGSLLVRYFIVF-VWCVLRAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLEKTILTHFYAKLDSIGHDRASSNDGVHVR 2532
G + + LS L+ A + L +L+ + E + C L+ V + NPF+PG+ LSI A++A A EGERR + +QE V+ LLLE+LERLP++V+ F+ M C +FEP+ + PL + L +Q + FC PL+ DFL R+FT LP LRD + +L D E+ +L+RGG + G L L+ + +KED D + Q TL S+ ++ + SP LLQGAN + SLT PGAQ +AGL P+ Y+R PAMRM+LDL VY+G++V ST VLFH + P +I+ GV EG+EM R+FG Y D WN LDLL L +T GL+ R D + G A YAL+AP + SR LFF Q+ GPMIQ VVF MT L+KFG V+ V++LGF M+FH LF D D+FG + L LFKAMLG+ DFF F G Y VAT L V+Y ++ VMLLNLL+A+LSTSH++V ++EFKVS AR+++HY+LVV +LP PFNL+QLIV PI R+RS + A +A+G + FW+ LGPVA G++L + S L A + W H + + G + + SL +RY ++ WCV AP+YL+ WL A + L P C R A + ++ +L GG+ A L+ +L+DP+ D +VRQDE+ ++TTVE+IK LRNRLE T L+ H R G+ V+
Sbjct: 443 GRPFGLKLLSSLMACSARPSPSHLKKLAIAHARGEAFKDCCLDAVTSAANPFIPGLVLSIRLAEAAEKANEGERRAITDIQESVNALLLEVLERLPRSVRSFERDMDDCRDMFEPKFL-DVFEDFEKPLEMMLSRQQQRELFCNVPLVMDFLKRKFTLSLPRLRDPKEVLADSNEILHLSRGG----VKGDVCLVLDWGVDVDVQKEDGHLNDEQIDXXXXXXXXQADDHASLRPPWKHPTLFGSKSLLASFRSPRALLQGAN-----DRFPSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIV-WPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYAC--GSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCWCVFGAPVYLLLLWLNASRRVLSRCP-CNDDTRSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQLKG-LEEALHQRLMKEFGLSVQ 1246
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 2.710e-139 Identity = 307/742 (41.37%), Postives = 422/742 (56.87%), Query Frame = 1
Query: 385 EWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLA----RGGPGELMSGQKYLALNEE*RRKEDAKSLD-RCLLLDLQDKIGQEG----------TLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHE-------DGP---------LAPGEAAFAFYILAG-VITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIM-----VRDRSGQGTASTRAQ------------EAVGRMAFWLALGPVAAACGTMLLVLSSLFAPFVWHTHFFSKAQARRGRLSVGSLLVRYFIVF-VWCVLRAPLYLMAFWLTAPMKWLKLRPWCWV-WDRRQAPYIASWNPKSVNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLEKTI 2457
E R C L+ VA + NPF+PG+ LSI A++A EGE+R + + RV+ LLLEILE LP++V+ F+ M +FEP + S+ P+ + L RQ + FC+ PL+ DF+ R+FT GLP +RD + IL D +E+ +L+ RG ++ + + + R+ED +D + +D + G TLL S ++ + SP LLQGAN + LT P AQF +AGL + Y+R P MRM+LDL VYLG+LV ST VLF DG L EA A ++AG + E EM R++G Y D WN LDLLGL T G I R D G A YALSAP + SR LFF Q+ GPM V+F MT L+KFG V+ VVM+GF M+FH LF D D+FG + L LFKAM GE FF +F G Y +VAT L V+Y ++ ++LLNLL+A+LSTSHSKV+ D+EFK S AR+++HY+LVV +LP PFNL+QL+V PI RS G+ STR + +A+G + FW+ LGPVA GT+L ++S+ + ++W H + R RLS+ SL RYF + +WC+L AP+YL WL A + L C +D A + ++ +L GG+ A L+ +L+DP+ D +VRQDER K+TTVE++K LRNRLE TI
Sbjct: 295 EKFRDCCLDAVASASNPFIPGLVLSIRLAEAAEKTNEGEQRAITDVHARVNDLLLEILEGLPRSVRSFERDMDASGDMFEP--ASLPSKDFETPMEMILSRRQQTEIFCSAPLVMDFIKRKFTLGLPSMRDKKEILADSKEIFHLSGGDVRGNVCLVLGTFVPITVVDADVRREDGPFIDLKAEDMDKKAARADHGQLSAQAWAHPTLLGSNCLLASFRSPRALLQGAN-----DRLPCLTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSRVDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPM--VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVV-WPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVSTPLSVYLWRKHH---REGDRKRLSLISLGCRYFFIIPLWCILGAPVYLFVLWLGASRRLL-----CRCNYDVSIAHAESGHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENTI 1018
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 453 bits (1166), Expect = 4.660e-135 Identity = 319/817 (39.05%), Postives = 425/817 (52.02%), Query Frame = 1
Query: 310 LSCLLQYPAMFDTADLIQLSRER-SAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFD--GGMTGCSTVFEPELSREDS--RGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPG------------EAAFAF-YILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMV------------RDRS--------------------GQGTASTRAQEAVGRMAFWLALGPVAAACGTMLLVLSSLF-APFVWHTH---------FF---------------SKAQARRGRLSVGSLLVR---------------------YFIVFVWCVLRAPLYLMAFWLTAPMKWLKLRPWCW---VWDRRQAPYIASWNPK-----SVNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLE 2448
L L+ A ++L LSR+ S + + C L V + NPF+PG+TLSI ++A A EGERR L + +D +LLE+ ERLPQTV+GF+ G C+ V EPEL R S L GPL + + + ++TFC PL+ DFLS +FT GLP L DT +L + +L L G L + L L+ G LL++ LL+G G+W+ +LTFLPGAQF +A +V P +YY PAMRMLLD VY+G++ S VLFH PG E A A +I AG EG+EM R Y D WN+LD LG+ + GL++R D ++WG A YALSAP + +R+LFFAQ+L+F GPM+QV+F MTA L++FG V++VVM+GF M+ H +F DV+ FG T L LFKAMLGE FF F G +Y VAT L V+Y ++ VMLLNLLIA+LST H++V+ FKVSKARII HYR VVD +LP PFNLVQL++SL ++ R++S G A+ A G++ +WL LGPVA A G +L LS F A + WH+ FF SK G S GS L R +F+ F+ C+L AP L WL P + WCW Q P +PK ++ +L+ G+ A L +LEDP+ D +VRQDE+ K+TTVE+IK LR+RLE
Sbjct: 494 LFSLIANSARPSASELKGLSRKAASGDVFKRCCLRAVTSAANPFIPGVTLSIRLTEAAKQASEGERRALFETKSSIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDG---LFRDEHGLGLD------------------------GIPVALLEA------------LLKGVR-QGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSGFFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFG--SCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWLVLPGT--EFFSWCWKLAACRSTQDPDEDEESPKRLSTPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 5.770e-131 Identity = 316/816 (38.73%), Postives = 421/816 (51.59%), Query Frame = 1
Query: 310 LSCLLQYPAMFDTADLIQLSRER-SAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFD--GGMTGCSTVFEPELSRED--SRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHE--------DG------PLAPGEAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMV------------RDRSGQGTAST--------------------RAQEAVGRMAFWLALGPVAAACGTMLLVLSSLF-APFVWHT---------HFFSKAQAR----------------------------------RGRLSVGSLLVRYFIVFVWCVLRAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKS--------VNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLE 2448
L L+ A + L +LSR+ S + + C L V + NPFVPG+TLSI +++A A EGERR L + +D LLLE+ ERLPQTV+GF+ GM C+ V EPEL R S L GPL + + + ++TFC PL+ DFLS +FT GLP L DT +L + L L G L + G +G I LL+ LL+G G+W+ LTFLPG QF +A +V P +YY PAMRMLLD VY+G++ S+ VLFH DG L+ G A F I AG EG+EM R Y D WN+LD LG+ + GL++R D ++WG A YALSAP + +R+LFFAQ+L+FHGPM+QV+F MTA L++FG V++VVM+GF M+ H F DV FG T L LFKAMLGE F F G +Y VAT L V+Y ++ VMLLNLLIA+LST H++V + FKVSKARII HYR VVD +LP PFNLVQLI+SL ++V R+ S +T A+ A G+ +WL LG VA A G ML LS LF A + H+ FF Q R L +++ +F++F+ C+L AP L+ WL P + WCW ++ + KS + +L+ G A +L +LEDP+ D +VRQDE+ ++TTVE+IK LR+RLE
Sbjct: 511 LFSLIANSARPSASALKELSRKAASGDIFKRCCLRAVTSAANPFVPGVTLSIRLSEAAKQASEGERRALFDTKSSIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDG------------------------------LFRDEHGFGSDG-------IPVALLA--ALLKGVR-QGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIF-ITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGT--EFFSWCWKLAACRSTQDPGEDKKSPMRSSTPTIESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 433 bits (1113), Expect = 2.740e-125 Identity = 292/796 (36.68%), Postives = 414/796 (52.01%), Query Frame = 1
Query: 292 DWAIGALSCLLQYPAMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPG-EAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRC-ADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMVRD---RSGQ--GTASTR---------------------------------AQEAVGRMAFWLALGPVAAACGTMLLVLSSLFAPFV-WHTHFFSKAQARRGRLSVGSLLVRYFIVFVWCVLRAPLYLMAFWL---TAPMKWLKLRPWCWVW------------DRRQ--APYIASWNP-------------KSVNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLEKTILTH 2466
D + L+ LLQ A L++LS L+ L ++ ++NPF+PGM LS+A + A EGE+R+L S+Q VD LLLE+LE +PQTV+GF G M CS +FEPE G GPL + L +R+ ++T+CT PL+ DF++R+FT GLP LRDT+ +L + T GG G L G+ + +L R G G L S +T+ PGA+F +AG + P YY+ PA+RM LDL Y+ +++ F V+ HE G + E F YI G++TE +E++ D Y D WN+LD+ L L+ GG I R D+ RALYALSAP F+R+LFFAQ+L GPMIQV+FSMT L KFG+++++VMLGF SF++L+ + +G +F+A LGE D+ F G + VAT L V+Y V++ +M+LNLL+AVLST+H+KV+ A E+KV++AR+I+HY VV++ LPPPFNL Q I +LP MV D R+ + TAST A+ GR+AFW LGP+A G +L ++S + AP V W T G S+G + R +V C + AP + + W+ A ++ C D R A A +P K V +L+ G L +LQ++L+DP+ D +VR+DE + TTVE+IK LRNRLE T H
Sbjct: 893 DARLSVLAYLLQQGAKPTNKGLLRLSNLVKFPRLKESLLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPETVISRFHGYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVLLSNKGFTQTLYGG-GLLAEGKVFFF----------GMALQR----------GYAGGALSS----------------------------ITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKAPVVVWQTS---------GDKSLGGRIARMLLVIFVCAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLEATTKEH 1630
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 368 bits (944), Expect = 2.990e-106 Identity = 262/692 (37.86%), Postives = 363/692 (52.46%), Query Frame = 1
Query: 310 LSCLLQYPAMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSA-SVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSR-GLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPGEAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDV--DTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTMLLVLSSLFAPF-VWHTHFFSKAQARRGRLSVGSLLVRYFIVFVWCVLRAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGKSG-GLVAGDLQMYLEDPI 2367
LS LLQ+ DL+ L R E L C + VA + N F+P + LS AF + S A E +RR L LQ VD++L E L RLPQ+V G GGM C+ + EPE++ + S G GPL AL + TF T PL +F+ +FT GLP L+D ++ L+ + L + EE + E +L C L + + G LL D L+P LTF PGA F G+V +P+ YY+ P MRM L+ ++ L FF++ VL E G L E AFA Y++A ++ E EM +D Y D W L L + + R D D+SWGR LYA+ +P ++ RLL++AQ++ G IQV++ M +EL +F VV+ VV+LGFAMSF ALF DV +T G L F+AMLGEV F F G+++ AT L V Y VV+ +MLLNLLIAVLST+H KVE +VS+AR+ HYR VV LP PFNL QL+V LP + D +G A+ VGR+ FWL LGP A G + ++S+ A F +W + LS+ S L R + +W L PL L+ W+T + L R + R P I + V+D+L +G G+ A L+M+L++P+
Sbjct: 334 LSMLLQHGTKPHPTDLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLNRLPQSVCGLSGGMAACTALLEPEVADDSSTYGERGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSV-----------------LILEKSRLDIREEAKGHESLTAL--CPGSILGGFLPRVGKLLWD----DDRLAP------------------LTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGPGAILGGVFVWLVSTPKALFAIWG----------KRSLSIASRLGRTMLCLLWITLGVPLCLVVSWVTQATRVLFGRTFGLEGARSSGPIIYT-----VDDMLREVTGVGMAA--LRMHLKNPV 965
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 370 bits (949), Expect = 3.140e-106 Identity = 264/690 (38.26%), Postives = 363/690 (52.61%), Query Frame = 1
Query: 310 LSCLLQYPAMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSA-SVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSR-GLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPGEAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDV--DTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTMLLVLSSLFAPFVWHTHFFSKAQARRGRLSVGSLLVRYFIVFVWCVLRAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGKSGGLVAGDLQMYLEDPI 2367
LS LLQ+ ADL+ L R E L C + VA + N F+P + LS AF + S A E +RR L LQ VD++L E L+RLPQTV G GGM C+ + EPE + + S G GPL AL + TF T PL +F+ +FT GLP L D ++ L+ + L + EE + E +L C L + + G LL D L+P LTF PGA F G+V +P+ YY+ P MRM LD V+ L FF++ VL E G L E AFA Y++A ++ E EM +D Y D W L L + + R D D+SWGR LYA+ +P ++ RLL++AQ++ G IQV++SM +EL +F VV+ VV+LGFAMSF ALF DV +T G L F+AMLGEV F F G+++ AT L V Y +V+ +MLLNLLIAVLST+H KVE +VS+AR+ HYR VV LP PFNL QL+V LP + D + A+ VGR+ FWL LGP A G + ++S+ A F A R+ LS+ S + R + +W L PL L+ W+T + L R + R P I +V+D+L+ +G +A L+M+L++P+
Sbjct: 425 LSMLLQHGTKPHPADLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLDRLPQTVCGLSGGMAACTALLEPEEADDSSTYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSV-----------------LILEKSRLDVREEAKGHESLTAL--CPGSILGGFLPRVGKLLWE----DDRLAP------------------LTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGPGAILGGIFVWLVSTPKALF---------AICRKRSLSILSRVGRTMLCLLWITLGVPLCLVVSWVTQATRVLFGRTFGLEGARPSGPII-----HTVDDMLKEVTGVGMAT-LRMHLKNPV 1056
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 367 bits (942), Expect = 1.390e-103 Identity = 256/735 (34.83%), Postives = 366/735 (49.80%), Query Frame = 1
Query: 292 DWAIGALSCLLQYPAMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSREDSRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKIGQEGTLLDSRKIVDTLLSP*TLLQGANCAGLWNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPG-EAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRC-ADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMVRDRSGQGTASTRAQE--------AVGRMAFWLALGPVAAACGTMLLVLSSLFAPFVWHTHFFSKAQARRGRLSVGSLLVRYFIVFVWCVLRAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVNDLLEGKSGGLVAGDLQMYLEDPIGDTEVRQDERRKQTTVENIKQLRNRLEKTILTH 2466
D + L+ LLQ+ A L++L L+ L ++ +DNPF+PGM LS+A + A EGE+R+L S+Q +D LLLE+LE +PQTV+GF G M CS +FEPE G GPL + L +RQ ++T+CT PL+ DF+SR+FT GLP LRDT+ +L L N + PG+ + G +G L + R + LQ + G T S+T+ PGA+F +AGL+ P YY+ PA+RM LDL Y+ +++ F V+ H+ G E F YI G++TE +E++ D Y D WN+LD+ L L+ GG+I R D+ RALYALSAP F+R+LFF Q+L GP+IQV+FSMT L KFG+++++VMLGF SF++L+ + T+G +F+A LGE D+F F G + VATAL V+Y V++ +M+LNLL+AVLST+H+KV+ A E+K P++V SG + R AVG FW + V + + +L A+ GR S+ VR F P +A M+ K V +L+ G L +LQ++L+DP+ D VR+DE + TTVE+IK LRNRLE T H
Sbjct: 645 DARLSVLAYLLQHGAKPTNKGLLRLCNLVKFPRLKESLLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPETVISRFHGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVL-----LNNTSFTEPGQTLYG---------------------------------DGLLAEGRVFFFGMA-----LQRSYAGG---TLSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDAGDTFDWMEIVFTMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQVDDQSSRALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTTYGVVWKAIFRATLGETDYFDDFSGTTFDGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLEYKA-------------------------------PVVVWQTSGDKSRGGRIARMLLVIFACAVGAP-FWHLVMWVRGGVAGVRRTMRALGCCXXXXXXXXGGAKRVGGRTPTASMTVRGF----------PATTVAEGAEHDME------------------------KVVPIVLQEADGALATSELQIFLDDPMSDPAVRRDEETRATTVEHIKLLRNRLEATTKEH 1267
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI) HSP 1 Score: 343 bits (881), Expect = 2.610e-97 Identity = 233/607 (38.39%), Postives = 319/607 (52.55%), Query Frame = 1
Query: 307 ALSCLLQYPAMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSTVFEPELSRE-DSRGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRREL---TNLARGGPGELMSGQKYLALNEE*RRKEDAKSLDRCLLLDLQDKI----------GQEGTLLDSRKIVDTLLSP*--------TLLQGANCAGL---------------WNTAISLTFLPGAQFTLAGLVGMPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPGEAAFAFYILAGVITEGQEMMRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPPIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGS-FPGKQYYSVATALFVIYPVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRLVVDMCLLPPPFNLVQLIVSLPIMVRDRSGQGTASTRAQEAVGRM----AFWLALG 2001
A+S Y A+ D DLI L+ E ++ CFL ++ DNPF+PG++LS+A +S APE E R L +LQ+ +D LL +L+RLPQT+ F GG+ GC +V EPE++ R GPLRLALQERQ +T C PL+ ++ RF GLP L+D+ ++LG R E T+ GP A GT RK D L S LLQG G W T S TFLPGAQF L G++ P YY+ P MRMLL V+L L ++ V L +DG L+ E A F+++A +++ +M F + D WN L+ L L L+ GGL +R + D GRAL+ALSAP +FSR+LFF Q L+ G +IQ++ + E+++F +V+ +M+GF +SF+ALF + ++G L +FKAMLGEV F + Y VA L V+Y V+AVMLLNLLIAVLST H+KV+ + D F+ SK RI++ Y +VD +LP PFNL Q+ V L R G T+ + R FWL LG
Sbjct: 182 AMSVFFAYGAVVDPKDLIALAEILKLEEMKDCFLGGLSFVDNPFIPGLSLSVALEESLKNAPERESRCLEALQKAMDDLLRAVLDRLPQTIASFPGGVGGCESVLEPEVAGVLRDRDFRGPLRLALQERQFSKTLCIAPLMFKYMCYRFVAGLPDLQDSNDLLGGREEKRTRTSFETSGPVRAPVASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSGTRR-GRKGRDFLYSDGFVAGSATERLLQGLGWTGRRAAAALTPPPERPSDWETIFSGTFLPGAQFVLVGILTKPLAYYKVPVMRMLLGFYVHLITLALYTAVALESDDGELSNTEIALTFHVMAEIVSNLLQMRAGFVEFWRDKWNWLESLSLLLLAGGLTIRIRNSDVHQGRALFALSAPLVFSRVLFFGQFLKRQGLVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALFEEAKSYGDVWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNLPQIAVGLVA----RGVDGLLGTKTCPKIMREFSVGVFWLTLG 783 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10696.637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10696.637.1 >prot_Ecto-sp13_S_contig10696.637.1 ID=prot_Ecto-sp13_S_contig10696.637.1|Name=mRNA_Ecto-sp13_S_contig10696.637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=530bp MPDQYYRFPAMRMLLDLAVYLGLLVFFSTVVLFHEDGPLAPGEAAFAFYIback to top mRNA from alignment at Ecto-sp13_S_contig10696:3..4814+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10696.637.1 ID=mRNA_Ecto-sp13_S_contig10696.637.1|Name=mRNA_Ecto-sp13_S_contig10696.637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10696:3..4814+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10696:3..4814+ >mRNA_Ecto-sp13_S_contig10696.637.1 ID=mRNA_Ecto-sp13_S_contig10696.637.1|Name=mRNA_Ecto-sp13_S_contig10696.637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1590bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10696:3..4814+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |