mRNA_Ecto-sp13_S_contig1973.6369.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1973.6369.1
Unique NamemRNA_Ecto-sp13_S_contig1973.6369.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A6H5LEA1_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA1_9PHAE)

HSP 1 Score: 775 bits (2001), Expect = 5.210e-276
Identity = 420/454 (92.51%), Postives = 427/454 (94.05%), Query Frame = 1 
Query:   52 QRTSVQGYRSRVGRNRFRVAQTNQHQAHNDEEGVPSSTTPAGGRSVLDGEGELSWLDELLERCAEATKSDAAAESSHTGSSEWAGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVASPEDGRVGVYLTVLPAGNGSPPSHRPMYGCHILSRVLAGEVEQQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESGSAKNDILPIVAMDACPCPPALLFRDGDVYEEXXXXXXXXXXLTLVRSDGGVVEQGRAAGEVVAGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQAL--------GVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHER 1389
            Q TSV GYRSRVG N  RVAQT+QHQAH  EEGVPSSTT AGGRSV DGEGEL+ LDELLERCAEATKSDAAAESSHTGSSEWAGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVA+PEDGRVGVYLTVLPAGNG+PPSHRPMYGCHILSRVLAGEVEQ VKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGES  A+N ILPIVAMD+CPCPPALLFRDGDVYEEXXXXXXXXXXLTLVRSDGGVVEQGRAAGEVV GGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTE+            GVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHER
Sbjct:   76 QETSVPGYRSRVGSNSHRVAQTHQHQAHKTEEGVPSSTTTAGGRSVPDGEGELTLLDELLERCAEATKSDAAAESSHTGSSEWAGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGNPPSHRPMYGCHILSRVLAGEVEQ-VKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESSPAENGILPIVAMDSCPCPPALLFRDGDVYEEXXXXXXXXXXLTLVRSDGGVVEQGRAAGEVVGGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTEVGHGTARYGAVRCGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHER 528
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A836CBN6_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN6_9STRA)

HSP 1 Score: 283 bits (724), Expect = 7.650e-84
Identity = 187/402 (46.52%), Postives = 230/402 (57.21%), Query Frame = 1 
Query:  205 ELSWLDELLERCAEATKSDAAAESSH--TGSSEWAGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVASPEDGRVGVYLTVLPAGNGSPPSHRPMYGCHILSRVLAGEVEQQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESGSAKNDILPIVAMDACPCPPALLFRD-----GDVYEEXXXXXXXXXXLTLVRSDGGVVEQGRAAGEVVAGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHER 1389
            +L+   +LL+ C  A    A AE +   +GSSEW+GF TA   L+ V   L +     R   G++LAWSWL LS  P+RV +   + G  GV LTVLP G   PP+HRPM G H+LS V  G+VEQ VK+N +R+I R+ H+ ETP+W+SFGGG RRL N S   A ILEV+ Y   RG     + A  G    G+AE  AEA+                      +    +  + A PC P +LFR      GD   E          L L                 V G          LA  VGGLD QLE+IVRRVL+TR++P ++RQALGV HVRGLLL+GPPGCGKTLLAREL+RRL ARPP+LVSGPE+LDKWVGEAERKVR LF  AE +HER
Sbjct:   95 QLNVFHQLLQDCQTAADYAATAEPADAGSGSSEWSGFWTAEPKLQQVLDSLQQCSPAWRGGRGASLAWSWLGLSTMPLRVMLH--QGGGFGVLLTVLPPG-AKPPAHRPMIGAHMLSIVCQGDVEQ-VKANGQRIINRTRHTPETPIWNSFGGGVRRLANMSVTTAYILEVLFYG-KRGPPEYDTRAPDG----GAAERNAEADEF------------------ILSGPRAMATLSAPPCDPEVLFRSVGEEGGDEGGEVLVIRGREGSLLLGXXXXXXXXXXXXXXXXVVGA--------SLATSVGGLDTQLEEIVRRVLATRALPADVRQALGVSHVRGLLLYGPPGCGKTLLARELARRLKARPPQLVSGPEVLDKWVGEAERKVRALFAAAEEEHER 461
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A7S0TKK2_HEMAN (Vesicle-fusing ATPase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TKK2_HEMAN)

HSP 1 Score: 130 bits (327), Expect = 4.130e-33
Identity = 61/100 (61.00%), Postives = 79/100 (79.00%), Query Frame = 1 
Query: 1075 LTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAE 1374
            LT + +   VGGLD  +  I+RR L++R +P    + LG+ HVRG+LLHGPPGCGKTL+ARE++R + +RPPK+V+GPEILDKWVGEAER VRLLF +AE
Sbjct:    3 LTLEMMKRRVGGLDEPIAAILRRALASRKLPPSTMRELGLRHVRGILLHGPPGCGKTLVAREIARAIKSRPPKIVNGPEILDKWVGEAERNVRLLFYEAE 102
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A1E7FWZ3_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWZ3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.550e-32
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 1 
Query: 1087 GLACD-VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHER 1389
            GLA + VGGLDGQL DIVRRVL++R+   +L + LGV HVRG+LL GPPGCGKTLLARELS  LGAR P++V+GPEILDK++GEAE+ VR LF  AEL++E+
Sbjct:    2 GLAFEKVGGLDGQLNDIVRRVLASRA-NRDLSRRLGVNHVRGILLSGPPGCGKTLLARELSEMLGAREPQIVNGPEILDKFIGEAEKNVRQLFEPAELEYEQ 102
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: L1IAN3_GUITC (Vesicle-fusing ATPase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IAN3_GUITC)

HSP 1 Score: 133 bits (335), Expect = 1.600e-30
Identity = 112/335 (33.43%), Postives = 154/335 (45.97%), Query Frame = 1 
Query:  397 AWSWLTLSPRPVRVAVASPEDGRVGVYLTVLPAGNGSPPSHRPMYGCHILSRVLAGEVEQQVKSNSKRVIGRSTHSLETPVW----SSFGGGARRLINESF--QPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESGSAKNDILPIVAMDACPCPPALLFRDG-DVYEEXXXXXXXXXXLTLVRSDGGVVEQGRAAGEVVAGGVEDLLTAD--GLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAE 1374
            +WSW+  SP  + V V   E   V   L  LP G   PP   P  G  +L + L G  + +    + R       ++ T V     S + GG  R+  E+   +   +LEV +    + +G  G                             VE +  G   S+   +L    M++      LL   G   YEE                 GG  E G    E       D+ + D  GL   +GGL+ +LE IVRR  +TR +P E  + LGV HV+G+LL+GPPGCGKTL+ARE+ + L ARPPK+V+GPE+LDKWVGEAER +R LF +AE
Sbjct:  142 SWSWINQSPTALEVTVEETEGAEV--KLLFLPPGQSLPPFEYPT-GTVVLLKTLFGRCDVRQMLGNPRGRAPMREAVRTAVSEEEVSLYLGGPCRIYGEATLEKSCCVLEVALIPALKITGMHGF----------------------------VEEESYGPLPSSL--LLDRRHMES------LLTAPGFPGYEEMR---------------GGRGEVGAEEEEEEGESSRDISSVDLEGLRTRIGGLEEELEAIVRRAFATRRLPREAMRRLGVSHVKGMLLYGPPGCGKTLIAREIGKLLKARPPKIVNGPEVLDKWVGEAERNIRSLFYEAE 422
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A8J9TMG8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TMG8_PHATR)

HSP 1 Score: 126 bits (316), Expect = 4.750e-30
Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 1 
Query: 1102 VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHE 1386
            VGGLD QLE I RRVL++R+ P   R+ LGV HVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK++GEAER+VR LF  AE +++
Sbjct:    6 VGGLDVQLEAIARRVLASRANPAAARR-LGVSHVRGILLSGPPGCGKTLLARELARILGAREPQIVNGPEILDKYIGEAERRVRDLFAPAEQEYK 99
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A7S1ZM88_TRICV (Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM88_TRICV)

HSP 1 Score: 126 bits (317), Expect = 5.040e-30
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 1 
Query: 1102 VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDH 1383
            VGGLD QL+ I RRVL++R+ P   R+ LGV HVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAE+KVR LF  AE ++
Sbjct:    8 VGGLDSQLDSIARRVLASRANPAAARR-LGVSHVRGVLLSGPPGCGKTLLARELSRVLGAREPQIVNGPEILDKFIGEAEKKVRDLFAPAEEEY 100
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A8J2SL94_9STRA (Vesicle-fusing ATPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL94_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.290e-29
Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = 1 
Query: 1072 LLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELD 1380
            LLT + L   VGGL+ QL+ IVRRVL++R+ P E  + LGVGHVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK+VGEAERKVR LF  AE +
Sbjct:  313 LLTQEALRERVGGLEQQLDAIVRRVLASRASP-EAAKRLGVGHVRGVLLSGPPGCGKTLLARELARALGAREPQIVNGPEILDKFVGEAERKVRELFAPAEAE 414
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A7S2M5J1_9STRA (Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5J1_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.420e-29
Identity = 66/96 (68.75%), Postives = 82/96 (85.42%), Query Frame = 1 
Query: 1099 DVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHE 1386
            +VGGLD QL+DI RRVL++R+ P   R+ LGV HVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAER+VR LF+ AE ++E
Sbjct:  367 NVGGLDKQLDDIARRVLASRANPAAARK-LGVSHVRGILLSGPPGCGKTLLARELSRLLGAREPQIVNGPEILDKFIGEAERRVRELFIPAEREYE 461
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BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Match: A0A7S4AUL9_9STRA (Vesicle-fusing ATPase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUL9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.490e-29
Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 1 
Query: 1087 GLACD-VGGLDGQLEDIVRRVLSTRSIPTELRQALGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHER 1389
            GLA + VGGLD QL DIVRRVL++R+ P E+ + LGV HVRG+LL GPPGCGKTLLARELS  LGAR P++V+GPEILDK+VGEAE+ VR LF  AE+++++
Sbjct:  356 GLAFEKVGGLDDQLNDIVRRVLASRANP-EVARRLGVNHVRGILLSGPPGCGKTLLARELSSMLGAREPQIVNGPEILDKFVGEAEKNVRALFRPAEVEYDQ 456
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1973.6369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEA1_9PHAE5.210e-27692.51Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CBN6_9STRA7.650e-8446.52Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S0TKK2_HEMAN4.130e-3361.00Vesicle-fusing ATPase (Fragment) n=1 Tax=Hemiselmi... [more]
A0A1E7FWZ3_9STRA2.550e-3267.65Vesicle-fusing ATPase (Fragment) n=1 Tax=Fragilari... [more]
L1IAN3_GUITC1.600e-3033.43Vesicle-fusing ATPase n=1 Tax=Guillardia theta (st... [more]
A0A8J9TMG8_PHATR4.750e-3067.37Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S1ZM88_TRICV5.040e-3068.09Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres c... [more]
A0A8J2SL94_9STRA1.290e-2967.96Vesicle-fusing ATPase n=1 Tax=Pelagomonas calceola... [more]
A0A7S2M5J1_9STRA1.420e-2968.75Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi ... [more]
A0A7S4AUL9_9STRA8.490e-2966.67Vesicle-fusing ATPase n=1 Tax=Pseudo-nitzschia aus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1973contigEcto-sp13_S_contig1973:9..2783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score804.7
Seed ortholog evalue2.3e-230
Seed eggNOG ortholog2880.D8LSL6
Model size1392
KEGG koko:K06027
KEGG TC1.F.1.1
KEGG Pathwayko04138,ko04721,ko04727,ko04962,map04138,map04721,map04727,map04962
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000502,GO:0000731,GO:0002020,GO:0002082,GO:0002790,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006897,GO:0006909,GO:0006914,GO:0006919,GO:0006928,GO:0006950,GO:0006974,GO:0007034,GO:0007041,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009306,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033554,GO:0034098,GO:0034214,GO:0034404,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036435,GO:0036503,GO:0036513,GO:0040011,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045732,GO:0045838,GO:0045862,GO:0045935,GO:0045937,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046903,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0051788,GO:0051881,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0060828,GO:0061134,GO:0061136,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098657,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000116,GO:2000152,GO:2000158,GO:2001056,GO:2001169,GO:2001171
Exons5
EggNOG free text desc.SNARE complex disassembly
EggNOG OGsCOG0464@1,KOG0741@2759
Ec32 ortholog descriptionATPase, AAA-type, core
Ec32 orthologEc-09_002110.1
EC3.6.4.6
Cds size1392
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462995.7910974-CDS-Ecto-sp13_S_contig1973:8..2271681462995.7910974-CDS-Ecto-sp13_S_contig1973:8..227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1973 9..227 -
1681462995.804342-CDS-Ecto-sp13_S_contig1973:590..11021681462995.804342-CDS-Ecto-sp13_S_contig1973:590..1102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1973 591..1102 -
1681462995.812643-CDS-Ecto-sp13_S_contig1973:1457..15421681462995.812643-CDS-Ecto-sp13_S_contig1973:1457..1542Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1973 1458..1542 -
1681462995.8215613-CDS-Ecto-sp13_S_contig1973:1694..19371681462995.8215613-CDS-Ecto-sp13_S_contig1973:1694..1937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1973 1695..1937 -
1681462995.83316-CDS-Ecto-sp13_S_contig1973:2450..27831681462995.83316-CDS-Ecto-sp13_S_contig1973:2450..2783Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1973 2451..2783 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1973.6369.1prot_Ecto-sp13_S_contig1973.6369.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1973 9..2783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1973.6369.1

>prot_Ecto-sp13_S_contig1973.6369.1 ID=prot_Ecto-sp13_S_contig1973.6369.1|Name=mRNA_Ecto-sp13_S_contig1973.6369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp
MSLQSQHRKEHQRQGHRQRTSVQGYRSRVGRNRFRVAQTNQHQAHNDEEG
VPSSTTPAGGRSVLDGEGELSWLDELLERCAEATKSDAAAESSHTGSSEW
AGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVAS
PEDGRVGVYLTVLPAGNGSPPSHRPMYGCHILSRVLAGEVEQQVKSNSKR
VIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSG
SYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESGSAKNDILPIVA
MDACPCPPALLFRDGDVYEEEEDEEDGGGGLTLVRSDGGVVEQGRAAGEV
VAGGVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTELRQALGVGH
VRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKV
RLLFLDAELDHER*
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mRNA from alignment at Ecto-sp13_S_contig1973:9..2783-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1973.6369.1 ID=mRNA_Ecto-sp13_S_contig1973.6369.1|Name=mRNA_Ecto-sp13_S_contig1973.6369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2775bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1973:9..2783- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCCTTCAGTCCCAACATCGCAAGGAACACCAGCGGCAGGGGCACCG
GCAAAGAACTTCTGTGCAAGGGTATAGGAGTAGGGTTGGGAGAAACAGAT
TCAGGGTAGCACAGACGAATCAGCACCAGGCGCACAATGACGAGGAAGGA
GTCCCAAGCAGCACGACGCCAGCCGGAGGGCGGAGTGTTCTAGACGGGGA
GGGCGAGTTGAGCTGGCTGGACGAGCTTCTAGAGCGTTGTGCGGAAGCCA
CAAAGAGTGATGCGGCTGCAGAGTCCTCCCACACGGGTTCCAGCGAATGG
GCCGGATTTAAAACAGCCCCGGCGTTGTTGGAGGTGAGGACAGCTTGTGC
ACACAAGGACAGCTACGAGGGCACGTGTGTGTCGTGTAGATCGTGGGCAA
CAGCATGAAGGTCCTCACTGTTGTGTGTTTTGTGTAGGCAATCATACAGC
AATATTAGCGCTAACGCCAGTAGCGGTAAGATTGGTGGTGGTTACGGCAT
GGGTAAAAGCGGCAGTATCTAGCGGGAGAGCTGATCGAGTCTGGGGTGAA
GGGCAAGGTTGAGACGGGCGGCACTTTCTCGACTATGCGAGAAGTCGACC
AATGCTACAAGCGACAAACCTCGCCAGTATGCTTACGTGCATCTATTTCA
TGTATGCGTTTGGATCAACTGCGGAACAAGGCTGGCCGAAGGAAACGTCT
CACTCGTAGGACGTGTGTGCATTCCTCCTACGTGGTTCGGTAAACCAAGG
GGCATCCAGTCAACCCTGTCTTTCCACCTCGCTCTCACCGGTTGCTTCTC
TCCCCTGCCCCCGCCATACCCGACCACGAACCCTCCGCTCAACAAGGGTG
TTAGGGCTGTTCTCTCCCGCGCCCGTCAACGCTCGCGGCACTCCGACGGC
TCGGCCCTGGCCTGGTCGTGGCTAACGCTGTCCCCTCGCCCGGTGAGGGT
GGCGGTCGCCTCCCCGGAGGACGGGCGCGTCGGCGTGTACCTAACCGTGC
TTCCGGCGGGCAACGGCAGCCCTCCGTCGCACCGGCCGATGTACGGGTGC
CACATACTGTCGCGGGTGCTGGCGGGCGAGGTGGAGCAGGTGCGTGTGGG
TGCCTATCCCTATTTCTGGCATCACGATCAATCAGATGTGTGGTTGAGGC
TTGTGCAAGAGCTCGACACCTACCCCTTCGTCCACTAGCCATCACGCACC
CGAATTCTCGTGTTTGGCCTCGATTATCACCCGAACTCGAGCAGGTGAAG
TCCAACAGCAAGCGGGTGATCGGGAGGTCTACGCACTCATTGGAAACCCC
TGTTTGGTCGAGCTTCGGGGGTGGAGGTGAGACTACACTTTGCTTCCCGT
TGACGAAGATCAACAACCCTGTGATTTGCAACTGAAGTGTGCTGAGCTCG
AGAAGCTATCGGGCATCCGGCATTCCCCCCCCCTCTGTTCGCGCGCTCTT
GAAGCGCCTTGCTGCTCGACGCTGTGTGGCCTTTCGTTGCATCAGCACCA
TTTCCAACCAGAAAACCCGCTGATTATTCCCCATGTCGGCTGAAATGGGC
GCGTGCAGCACTTCATGGCGAGAGTAACAAAACCACGCGGCCGTCCAGGG
AGCGCACTCCTTTCCGGCCATCTCCCGCTCACGCACTCTCATCCCGCCCG
CGACTCTATTTTTATCTCCCTTGTCTCCCAGCCCGACGGCTCATCAACGA
GAGCTTCCAGCCGGCGGTCATACTCGAAGTGGTCATGTACGACTGGTCGA
GGGGATCGGGGTACTCCGGGAGCTACGCCGCTCCGGGCACCAGCAGCTCC
GGTTCCGCCGAGCTCCGGGCGGAGGCCGAAGGCGTCGGGCGGGCGGAGGC
GGCGGGGGTAGAAGGGGACGGCGGCGGGGAGAGCGGCTCCGCCAAGAATG
ACATCCTCCCGATCGTGGCCATGGATGCGTGTCCGTGCCCGCCAGCGCTG
CTGTTTCGTGATGGAGATGTGTACGAAGAGGAGGAGGACGAGGAGGACGG
GGGGGGCGGGCTGACGCTCGTACGCAGCGACGGGGGAGTCGTGGAGCAAG
GGCGGGCGGCGGGTGAGGTGGTTGCGGGGGGGGTGGAGGACCTGTTGACT
GCGGACGGCCTGGCGTGCGACGTCGGCGGGTTGGATGGGCAGCTGGAGGA
CATCGTGCGGAGGGTGCTGTCTACGAGGTCGATACCCACCGAGGTAGGTC
ACGGTACAGCACGCCACGGCACGGCATGGCACGGCACGGCATGGCACGGT
ACGGTACGGTACGGTACAGTACGGCGAGAGGCAGGCGAGAGGGGGTTCAT
GCTTGAGCCGACGGATGTTCCGTGCGAGAATTTCAATCAAGTTTCCTGCT
GTTGGGGCAGTGGTGCCAAACGTGGCTGACTCTCTCTCGCTCTCTCTCTC
TCTCTCTCTCTCTCTCTATGTCGCGACCTCGCCGTGCTGTTGCGTTGAGA
AAAGCGGCGAAGCGGCCGAACGCAAATTTCCTCGGTTTCCTCTCTTCGTT
GCATTTGACACACCGTCTCCCACGTTTACCCGCGCCCCCGCCCAACGCTT
ATCCAGCTGCGACAAGCTTTAGGGGTCGGTCATGTCCGAGGCCTCCTCCT
TCACGGTCCGCCCGGCTGCGGGAAGACGCTGCTGGCCAGGGAACTGAGCC
GGCGCCTGGGCGCGAGGCCTCCGAAGCTCGTGAGCGGACCGGAGATCTTG
GACAAGTGGGTCGGAGAGGCCGAACGCAAGGTGCGGCTTCTCTTCCTCGA
CGCGGAGCTGGACCACGAACGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1973:9..2783-

>mRNA_Ecto-sp13_S_contig1973.6369.1 ID=mRNA_Ecto-sp13_S_contig1973.6369.1|Name=mRNA_Ecto-sp13_S_contig1973.6369.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1973:9..2783- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCCTTCAGTCCCAACATCGCAAGGAACACCAGCGGCAGGGGCACCG
GCAAAGAACTTCTGTGCAAGGGTATAGGAGTAGGGTTGGGAGAAACAGAT
TCAGGGTAGCACAGACGAATCAGCACCAGGCGCACAATGACGAGGAAGGA
GTCCCAAGCAGCACGACGCCAGCCGGAGGGCGGAGTGTTCTAGACGGGGA
GGGCGAGTTGAGCTGGCTGGACGAGCTTCTAGAGCGTTGTGCGGAAGCCA
CAAAGAGTGATGCGGCTGCAGAGTCCTCCCACACGGGTTCCAGCGAATGG
GCCGGATTTAAAACAGCCCCGGCGTTGTTGGAGGGTGTTAGGGCTGTTCT
CTCCCGCGCCCGTCAACGCTCGCGGCACTCCGACGGCTCGGCCCTGGCCT
GGTCGTGGCTAACGCTGTCCCCTCGCCCGGTGAGGGTGGCGGTCGCCTCC
CCGGAGGACGGGCGCGTCGGCGTGTACCTAACCGTGCTTCCGGCGGGCAA
CGGCAGCCCTCCGTCGCACCGGCCGATGTACGGGTGCCACATACTGTCGC
GGGTGCTGGCGGGCGAGGTGGAGCAGCAGGTGAAGTCCAACAGCAAGCGG
GTGATCGGGAGGTCTACGCACTCATTGGAAACCCCTGTTTGGTCGAGCTT
CGGGGGTGGAGCCCGACGGCTCATCAACGAGAGCTTCCAGCCGGCGGTCA
TACTCGAAGTGGTCATGTACGACTGGTCGAGGGGATCGGGGTACTCCGGG
AGCTACGCCGCTCCGGGCACCAGCAGCTCCGGTTCCGCCGAGCTCCGGGC
GGAGGCCGAAGGCGTCGGGCGGGCGGAGGCGGCGGGGGTAGAAGGGGACG
GCGGCGGGGAGAGCGGCTCCGCCAAGAATGACATCCTCCCGATCGTGGCC
ATGGATGCGTGTCCGTGCCCGCCAGCGCTGCTGTTTCGTGATGGAGATGT
GTACGAAGAGGAGGAGGACGAGGAGGACGGGGGGGGCGGGCTGACGCTCG
TACGCAGCGACGGGGGAGTCGTGGAGCAAGGGCGGGCGGCGGGTGAGGTG
GTTGCGGGGGGGGTGGAGGACCTGTTGACTGCGGACGGCCTGGCGTGCGA
CGTCGGCGGGTTGGATGGGCAGCTGGAGGACATCGTGCGGAGGGTGCTGT
CTACGAGGTCGATACCCACCGAGCTGCGACAAGCTTTAGGGGTCGGTCAT
GTCCGAGGCCTCCTCCTTCACGGTCCGCCCGGCTGCGGGAAGACGCTGCT
GGCCAGGGAACTGAGCCGGCGCCTGGGCGCGAGGCCTCCGAAGCTCGTGA
GCGGACCGGAGATCTTGGACAAGTGGGTCGGAGAGGCCGAACGCAAGGTG
CGGCTTCTCTTCCTCGACGCGGAGCTGGACCACGAACGGTGA
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