prot_Ecto-sp13_S_contig197.6354.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig197.6354.1
Unique Nameprot_Ecto-sp13_S_contig197.6354.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length799
Homology
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BLAST of mRNA_Ecto-sp13_S_contig197.6354.1 vs. uniprot
Match: D7FRX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX2_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 2.450e-12
Identity = 38/51 (74.51%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:  239 RAAERLRFRLLRAGLRQGFITFLENRRCAQSAAAWAKDHDRTRKLHRSIHR 289
            RAA        R GLRQGF+TFL+NRRCAQSAAA AKDHDRTRKL RSIHR
Sbjct:    5 RAAREALAEAKRVGLRQGFMTFLDNRRCAQSAAARAKDHDRTRKLRRSIHR 55
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig197.6354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRX2_ECTSI2.450e-1274.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig197contigEcto-sp13_S_contig197:26109..31640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig197.6354.1mRNA_Ecto-sp13_S_contig197.6354.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig197 26109..31649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig197.6354.1 ID=prot_Ecto-sp13_S_contig197.6354.1|Name=mRNA_Ecto-sp13_S_contig197.6354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=799bp
MLVESALIDSQLAKITAVRSCLGNGGLGPSRGLETGDCHEHRDNHTKILS
KIFVCWRHELEAKARDRAWRATRNRCTLTKAVVLWNAWLQRNRGMDAERA
ARESLAEAKRLSRALHRFREMCVRRRGKRHLKRVSRAFHRLSQRRLQRAW
CRWRKLALDIQARAVFHSWAAATKQSLLLDEAKRAVSASHEAKAMAFVLT
LWRSRARASALARLLHAWAVIGPVRKAVGVMRSVAHEARAAERLRFRLLR
AGLRQGFITFLENRRCAQSAAAWAKDHDRTRKLHRSIHRWVIGHSQKVAV
ELWQHSVLKAKQRTSIKIWVSETAVSKRTRKRALSLCVKRLKQHIVRRRN
TRALASEAVKFRRARLWGGLRRWHARSISIQRQQRSNDAAYRIRRARFLR
QGLASFSSLKQESRAAYRAKVFRRDRCISATISCWRRTTTQFGDLHDLRQ
SACRHSRGQTLSAGLSFWRRRVAHVTRVSDTITRFQGRRGQRVGFLMFRS
CMENRTLFRLSMWRAGVWAEAHRARNALMTWRSHARAFAGIQTSVRIARH
RKQTRQAAQSRCSTLDGYVFRVLRTHTRARSLERRVLRAWCFHTESTARA
SKQVRVFRLRSGLLDLRSWVKSSETWRQRRLQAKTHRNHRVVETMFSTWR
NRVYPLGLRAHWGGIRPCTYIEGATKSKATQQNRDLAVGSREMQCLRTTE
AATARDWESVAGCSSLILLRLPMIGQRVRRVLYVWRKRAKKGIRFRYIRD
TLPKRKVLRPPRISQAREMGLLTGNSKPKGYLQLHMPNNYENKALPTR*
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