prot_Ecto-sp13_S_contig19611.6321.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19611.6321.1
Unique Nameprot_Ecto-sp13_S_contig19611.6321.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 1.680e-100
Identity = 174/247 (70.45%), Postives = 185/247 (74.90%), Query Frame = 0
Query:    1 SHPRHQGIAPGSEAAVNRDDSCRHAKSFEVDNGTEQQHNRDGSILAHDESSAITVLASFVPGALVGAAICVRLFIFAPFVFLLLCAACVAVMVVFLCGAGAAVVTKSHRKVETNILPRCLQFDTDSSVLC----RKHSWTVFVFPCKVEVNVQEAAGKVQAEMQKVGICDHVMTRARSLWDQVDKRTAPGGQLSKFVHGAQGQDTMGLIREEPQPVFDDAADTPKSAPCSPLSSGNEKAVPAKASDA 243
            S PRHQG APGSEAA NRDDS RHAKSFEVDNGTEQQH+RDGSIL HDESSAIT+L SFV GA VG  ICVRLF+FAP VFLLLC ACVAVMVV      AAVVTKS  K  T I  R   F +D  +      R+ + T +    KV+  VQEAAGKVQ EMQKVGICDHVMTRA SLWDQVDKRTAP  Q SKFVHGAQGQDT+ L REEPQP FD+A D PKSAPCSP SS NEK  P K SDA
Sbjct:    3 SDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGT-ISRRAGNFISDVLLALFRGVREFNRT-YQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247          
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 5.890e-56
Identity = 126/247 (51.01%), Postives = 153/247 (61.94%), Query Frame = 0
Query:    1 SHPRHQGIAPGSEAAVNRDDSCRHAKSFEVDNGTEQQHNRDGSILAHDESSAITVLASFVPGALVGAAICVRLFIFAPFVFLLLCAACVAVMVVFLCGAGAAVVTKSHRKVETNILPRCLQFDTDSSV----LCRKHSWTVFVFPCKVEVNVQEAAGKVQAEMQKVGICDHVMTRARSLWDQVDKRTAPGGQLSKFVHGAQGQDTMGLIREEPQPVFDDAADTPKSAPCSPLSSGNEKAVPAKASDA 243
            S+PRHQ  APG EAA  R+DS            TEQ+H+ D S LAHDESSAI VL SFV GALVGA +CVR+F+FAP V            VV LCGAGAAV TKS  K    I     ++  D  +    + R+ ++  +    KV +  QEAAGKV+AE+Q++GICD V TRARSLW+QVDKRTAP GQ    +  AQGQDT+ L+ EEPQ  FDDAAD  +S  CS  SS +EK V  +  DA
Sbjct:    3 SYPRHQVSAPGHEAAAVRNDSYL---------DTEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTV------------VVLLCGAGAAVFTKSDSKAG-QISREVGKWTCDVFLALFRVVREFNYK-YQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPP--IRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 224          
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Match: A0A6H5JZU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU5_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.590e-51
Identity = 93/113 (82.30%), Postives = 97/113 (85.84%), Query Frame = 0
Query:    1 SHPRHQGIAPGSEAAVNRDDSCRHAKSFEVDNGTEQQHNRDGSILAHDESSAITVLASFVPGALVGAAICVRLFIFAPFVFLLLCAACVAVMVVFLCGAGAAVVTKSHRKVET 113
            S+PRHQG APGSEAA NRDDSCRHAKSFEVDNGTEQQHNRD SILAHDESSAIT+L SFV GA VGA ICVRLF+ AP VFLLLC ACVAV VV    AGAAVVTKSH KVE+
Sbjct:    3 SNPRHQGSAPGSEAAANRDDSCRHAKSFEVDNGTEQQHNRDRSILAHDESSAITMLGSFVAGASVGAMICVRLFVLAPIVFLLLCGACVAVTVVLXXXAGAAVVTKSHSKVES 115          
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Match: A0A6H5JUV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.520e-32
Identity = 87/195 (44.62%), Postives = 105/195 (53.85%), Query Frame = 0
Query:    1 SHPRHQGIAPGSEAAVNRDDSCRHAKSFEVDNGTEQQHNRDGSILAHDESSAITVLASFVPGALVGAAICVRLFIFAPFVFLLLCAACVAVMVVFLCGAGAAVVTKSHRKVETNILPRCLQFDTDSSVLCRKHSWTVFVFPC----------------KVEVNVQEAAGKVQAEMQKVGICDHVMTRARSLWDQV 179
            S PRH+G APG EA   R+D             TEQ+H+ D S LAHDESSAI +L SFV GAL+GA IC R+F+FAP V            VV LCGAGAAV T S  +V   ++           V      WT  VF                  KV++  QEAA KV+AE+Q++GICD V TRARSLW+QV
Sbjct:    3 SDPRHRGSAPGHEAVAVRNDPYL---------DTEQEHHHDESTLAHDESSAIIMLGSFVAGALMGAIICARVFMFAPMV------------VVLLCGAGAAVFTNSDSEVGKFVVRLRWAGQISRGV----GKWTSDVFLALFRVVREFNYKYQLADKVKITAQEAARKVKAEVQRIGICDGVKTRARSLWEQV 172          
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.100e-23
Identity = 87/228 (38.16%), Postives = 111/228 (48.68%), Query Frame = 0
Query:    1 SHPRHQGIAPGSEAAVNRDDSCRHAKSFEVDNGTEQQHNRDGSILAHDESSAITVLASFVPGALVGAAICVRLFIFAPFVFLLLCAACVAVMVVFLCGAGAAVVTKSHRKV----------ETNILPRCLQFDTDSSVLCRKHSWTVFVFPCKVEVNVQEAAGKVQAEMQKVGICDHVMTRARSLWDQVDKRTAPGGQLSKFVHGAQGQDTMGLIREEPQPVFDDAAD 218
            S P+    A      V  +DS   AK   + +  EQ H     ++AHDE+S I V  SF+ GALVG  IC   F                  VV L GAGAA +TKS  KV           ++IL    +   + +    KH  T      K +V  +EAAGKV  +M+K+GI D+V  RA SLWDQVDKRTAP GQ S  +  AQGQD +  + +  Q  FD A D
Sbjct:    5 SQPQGSSEAAPVAMEVPTNDSYDLAKPCAISDN-EQPHQE---VIAHDEASGIIVFGSFIAGALVGVVICAPAF------------------VVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYN---HKHKLTD-----KAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQAS--IQAAQGQD-LSQVTDGTQIPFDGAVD 199          
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Match: A0A6H5JV13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV13_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 8.560e-14
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0
Query:  143 KVEVNVQEAAGKVQAEMQKVGICDHVMTRARSLWDQVDK 181
            KV+V VQEAA KVQAEMQKVGICDHVMTRARSLWDQVDK
Sbjct:   55 KVKVTVQEAARKVQAEMQKVGICDHVMTRARSLWDQVDK 93          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19611.6321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTP9_ECTSI1.680e-10070.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTQ0_ECTSI5.890e-5651.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZU5_9PHAE1.590e-5182.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUV7_9PHAE4.520e-3244.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP8_ECTSI2.100e-2338.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JV13_9PHAE8.560e-1492.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..243
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19611contigEcto-sp13_S_contig19611:492..2898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19611.6321.1mRNA_Ecto-sp13_S_contig19611.6321.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19611 492..2898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19611.6321.1 ID=prot_Ecto-sp13_S_contig19611.6321.1|Name=mRNA_Ecto-sp13_S_contig19611.6321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
SHPRHQGIAPGSEAAVNRDDSCRHAKSFEVDNGTEQQHNRDGSILAHDES
SAITVLASFVPGALVGAAICVRLFIFAPFVFLLLCAACVAVMVVFLCGAG
AAVVTKSHRKVETNILPRCLQFDTDSSVLCRKHSWTVFVFPCKVEVNVQE
AAGKVQAEMQKVGICDHVMTRARSLWDQVDKRTAPGGQLSKFVHGAQGQD
TMGLIREEPQPVFDDAADTPKSAPCSPLSSGNEKAVPAKASDA
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