prot_Ecto-sp13_S_contig1961.6320.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1961.6320.1
Unique Name	prot_Ecto-sp13_S_contig1961.6320.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	548

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: A0A6H5J887_9PHAE (Cysteine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J887_9PHAE)

HSP 1 Score: 860 bits (2221), Expect = 4.900e-301
Identity = 437/492 (88.82%), Postives = 445/492 (90.45%), Query Frame = 0

Query:   28 ASAFVTQGPSVHRTACRHYEQRQQRRLPASDGRTTSPHSSCFLPQKQQQKTLPTTASHSGSSGVVGSDIHHRRHSRVRARSVAGCNGVADGSGERRWQTSSLPRSSSLLVMGGAGEXXXXAGAEVESGLMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQG---------------------------FEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRV 492
            ASAFVTQGPSV+RTACRHYEQRQQ RL ASD RTTSP SSCFLPQK QQ TLPTTA HSGSSGVVGSDIHHRRHSRVRARS+AG NGVA GSGE RW+TSSLPRSSSLLVMGGA  XXXX  AEVESGLMLFNTEGRTKERFRPQDRRQD GRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWL+YQG                           FEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNI+PASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKH KYG LACLDTSGMEDGAGEGGG+NDA +FESEKEDAKDFALWKG+KPEDGEVFWDT LGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTL TALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRV
Sbjct:  556 ASAFVTQGPSVYRTACRHYEQRQQCRLQASDVRTTSPRSSCFLPQKGQQNTLPTTARHSGSSGVVGSDIHHRRHSRVRARSIAGGNGVAGGSGEWRWRTSSLPRSSSLLVMGGAXXXXXXXXAEVESGLMLFNTEGRTKERFRPQDRRQDFGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQGPTTTPCMTMSTPPPNIRLRSWSLVPPSFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIIPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHDKYGALACLDTSGMEDGAGEGGGVNDAADFESEKEDAKDFALWKGYKPEDGEVFWDTSLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLGTALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRV 1047

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: D7FX39_ECTSI (Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX39_ECTSI)

HSP 1 Score: 693 bits (1789), Expect = 9.770e-246
Identity = 340/355 (95.77%), Postives = 345/355 (97.18%), Query Frame = 0

Query:  138 MGGAGEXXXXAGAEVESGLMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRV 492
            MGGAGE    AGAEVESGLMLFNTEGRTKERFRPQDRR    RVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWL+YQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAY+VNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGG+NDA EFESEKEDAKDFALWKG+KPEDGEVFWDT LGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSL+SAKNTLRRLDKLRV
Sbjct:    1 MGGAGEGGGGAGAEVESGLMLFNTEGRTKERFRPQDRR----RVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRV 351

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: A0A835ZDL4_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL4_9STRA)

HSP 1 Score: 523 bits (1347), Expect = 2.990e-179
Identity = 248/336 (73.81%), Postives = 281/336 (83.63%), Query Frame = 0

Query:  156 LMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLR 491
            L L+NT  RTKE  RP   +    R+ FYSCGPTVYD AHIGNFRAFLTYDVLKRWL Y+GFEVDHVCNLTD+DDKII RMARDGV L ELT +YA LFF+DL +LN+VPA  YPRAT+H+ +IVEMVQ L++K LAYE NGS+YFRV++H  YG LA L   GM+DGAGEGGGI+D  E+E++KE AKDFALWK +KPEDG VFW+T LGKGRPGWHIECSAMARK+LGDT+D+HAGGIDLVFPHHENEVAQSEG TGKPFC CWVHN FVNV GEKMSKSKGNFLTL+  LATALDVRAFRYLVV+SQYRT L F+   L  AK+ ++RLDK R
Sbjct:   11 LQLYNTAARTKEPLRPLSGK----RIAFYSCGPTVYDHAHIGNFRAFLTYDVLKRWLTYRGFEVDHVCNLTDIDDKIIRRMARDGVGLRELTDRYAALFFEDLAALNVVPARAYPRATDHVAEIVEMVQTLLEKGLAYENNGSIYFRVARHSGYGALANLKFEGMQDGAGEGGGISDLDEYETDKESAKDFALWKAYKPEDGPVFWETALGKGRPGWHIECSAMARKYLGDTIDIHAGGIDLVFPHHENEVAQSEGATGKPFCNCWVHNGFVNVGGEKMSKSKGNFLTLRGALATALDVRAFRYLVVTSQYRTMLNFTPDVLAGAKSAVKRLDKAR 342

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: W7U426_9STRA (Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U426_9STRA)

HSP 1 Score: 493 bits (1268), Expect = 5.770e-166
Identity = 231/336 (68.75%), Postives = 276/336 (82.14%), Query Frame = 0

Query:  156 LMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLR 491
              L+NT  R KE F+        G+V FYSCGPT+YD AHIGNFRAFLTYDVLKRWL+Y G++V+HVCNLTDVDDKII RMARDG+SL ELT K+A++FF+DL++LN++PAS YPRATEHI DIV MVQ L+D+  AYE  GS YFRVS+   YG+LA LD SGME GA +GGGI+DA E+ ++K DAKDFALWK +K EDG VFW+T LGKGRPGWHIECSAMAR+FLG T+D+HAGG+DLVFPHHENE+AQSEG +G+ FCRCWVHN FVNV+ EKMSKSKGNFLTL+ +L T LDVRAFRYLVV+SQYR  L F+ + L  A+ T+ RLDK++
Sbjct:   90 FQLYNTASRKKEPFKTGQP----GKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVK 421

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: A0A7S0EPZ0_9CRYP (Cysteine--tRNA ligase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EPZ0_9CRYP)

HSP 1 Score: 461 bits (1187), Expect = 1.710e-155
Identity = 222/343 (64.72%), Postives = 261/343 (76.09%), Query Frame = 0

Query:  151 EVESGLMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRVR 493
            EV +G  ++NT  R KE F P    +D   VK Y+CGPT+YD AHIGNFRAFLTYDVLKRWL+Y G+EVDH+CNLTDVDDKII RM RD V L+ELT K+A  FFDDL+ LNI+PA +YPRATEHIDDIV+M+ GL++K  AYE +GS YF VS    YG LA LD   M DGA EGGGI D   FE  K+ +KDFALWK +KPEDGEV W+T L KGRPGWHIECSAM+R++LGD+ D+HAGG+DL FPHHENE+AQSE + G  +CR WVHN FVN++ EKMSKS GNFLTL+       D RAFRYLVVSSQYR  L F+   L+ A+NTL+RLDK R R
Sbjct:   89 EVLTGFKIYNTLSRDKETFEPMC--EDGRTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYEVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPARKYPRATEHIDDIVDMINGLVEKGNAYEKDGSYYFDVSSFPDYGKLARLDFDNMLDGASEGGGITDREGFE--KKSSKDFALWKAYKPEDGEVAWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKWRNR 427

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: L1I7X3_GUITC (Cysteine--tRNA ligase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I7X3_GUITC)

HSP 1 Score: 460 bits (1183), Expect = 2.320e-155
Identity = 221/341 (64.81%), Postives = 258/341 (75.66%), Query Frame = 0

Query:  151 EVESGLMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLR 491
            EV  G  ++NT  R KE F P    +D   VK Y+CGPT+YD AHIGNFRAFLTYDVLKRWL+Y G++VDH+CNLTDVDDKII RM RD V L+ELT K+A  FFDDL+ LNI+PA +YPRATEHIDDIVEM+ GL+ K  AYE +GS YF VS    YG LA LD   M DGA EGGGI D   FE  K+ +KDFALWK +KPEDGEV W+T L KGRPGWHIECSAM+R++LGD+ D+HAGG+DL FPHHENE+AQSE + G  +CR WVHN FVN++ EKMSKS GNFLTL+       D RAFRYLVVSSQYR  L F+   L+ A+NTL+RLDK R
Sbjct:   17 EVLKGFKIYNTLSRDKETFEPMC--EDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPARKYPRATEHIDDIVEMINGLVQKGNAYEKDGSYYFDVSSFPDYGKLARLDFDNMMDGASEGGGITDREGFE--KKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKRR 353

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: A0A7S2S4N2_9STRA (Cysteine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4N2_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 8.060e-154
Identity = 218/328 (66.46%), Postives = 261/328 (79.57%), Query Frame = 0

Query:  164 RTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLR 491
            R+KE F P+       +V FYSCGPTVYD AHIGNFRAFLTYDVLKRWL + GF+V+HVCNLTD+DDKIIAR+ARDGVSL+ELT KYA  FF+DL++LN++PA  YPRATE+I  I +MV+ L+    AYE NGS YF VSK  KYG LA LD  GM+DGA EGGG++ + +FE  K   +DFALWK +KP+DG+V W T LGKGRPGWHIECSAM R+F GD++D+HAGGIDLVFPHHENE+AQSE  TGK FCR WVHN FVNV+ EKMSKSKGNFLTL+ T  T L+VRAFRY VV+SQYR  L FS ++L ++K+ L+RLD+ R
Sbjct:    2 RSKEPFSPECP----PKVSFYSCGPTVYDFAHIGNFRAFLTYDVLKRWLTFLGFDVEHVCNLTDIDDKIIARIARDGVSLQELTDKYAAAFFEDLDALNVMPADAYPRATEYIGPIEDMVKSLLSSSAAYEENGSYYFDVSKSAKYGRLARLDIEGMQDGASEGGGMSSSEDFE--KRSPRDFALWKAYKPQDGDVSWTTSLGKGRPGWHIECSAMIREFFGDSVDLHAGGIDLVFPHHENEIAQSEAVTGKQFCRHWVHNGFVNVNNEKMSKSKGNFLTLRGTFKTPLEVRAFRYFVVTSQYRMPLNFSPEALAASKSALQRLDRFR 323

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: A0A7S4UT40_GUITH (Cysteine--tRNA ligase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UT40_GUITH)

HSP 1 Score: 461 bits (1185), Expect = 3.470e-153
Identity = 222/343 (64.72%), Postives = 259/343 (75.51%), Query Frame = 0

Query:  151 EVESGLMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRVR 493
            EV  G  ++NT  R KE F P    +D   VK Y+CGPT+YD AHIGNFRAFLTYDVLKRWL+Y G++VDH+CNLTDVDDKII RM RD V L+ELT K+A  FFDDL+ LNI+PA +YPRATEHIDDIVEM+ GL+ K  AYE +GS YF VS    YG LA LD   M DGA EGGGI D   FE  K+ +KDFALWK +KPEDGEV W+T L KGRPGWHIECSAM+R++LGD+ D+HAGG+DL FPHHENE+AQSE + G  +CR WVHN FVN++ EKMSKS GNFLTL+       D RAFRYLVVSSQYR  L F+   L+ A+NTL+RLDK R R
Sbjct:  123 EVLKGFKIYNTLSRDKETFEPMC--EDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPARKYPRATEHIDDIVEMINGLVQKGNAYEKDGSYYFDVSSFPDYGKLARLDFDNMMDGASEGGGITDREGFE--KKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKWRNR 461

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: A0A7S3E8V9_9RHOD (Cysteine--tRNA ligase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8V9_9RHOD)

HSP 1 Score: 415 bits (1066), Expect = 5.630e-136
Identity = 207/337 (61.42%), Postives = 251/337 (74.48%), Query Frame = 0

Query:  158 LFNTEGRTKERFRPQDRR-QDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRVR 493
            L+NT    KE F   DR   + G V+FYSCGPTVYD AH+GNFRAFLTYDVLKRWL Y+GF+V HV NLTDVDDKII R+ R+G +LEE+T KY+KLFFDDL  LN++PA +YPRAT+HI+DIV++++GL  K  AYE +GS YF+V     YG L  L+    E GA      ND  E++  K DA+DFALWK +K EDGEV W++ LG GRPGWHIECS MA K+LG  +D+H GGIDLVFPHHENE+AQSE ++GK F R WVHN FVN+ GEKMSKS GNF TL   +    D RAFRYLVVSSQYR+TL F+   L++A+NT++RLD LR R
Sbjct:   50 LYNTMTGKKEVF---DRTVHEDGVVRFYSCGPTVYDSAHVGNFRAFLTYDVLKRWLRYRGFDVSHVMNLTDVDDKIIKRVLREGSTLEEITEKYSKLFFDDLSLLNVIPADKYPRATDHIEDIVDLIEGLKAKGAAYETSGSTYFKVDSFSDYGKLVKLEK--RESGARRTE-ANDTDEYD--KSDARDFALWKAYKDEDGEVKWNSALGVGRPGWHIECSCMAIKYLGPQIDIHGGGIDLVFPHHENEIAQSEAYSGKEFARFWVHNGFVNIGGEKMSKSLGNFRTLGDVVKKPDDARAFRYLVVSSQYRSTLNFTEDVLKAARNTIKRLDSLRKR 378

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BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Match: R7QDF8_CHOCR (Cysteine--tRNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDF8_CHOCR)

HSP 1 Score: 406 bits (1043), Expect = 3.030e-133
Identity = 199/340 (58.53%), Postives = 246/340 (72.35%), Query Frame = 0

Query:  156 LMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVYFRVSKHGKYGTLACLDT--SGMEDGAGEGGGINDAVEFESEKEDAKDFALWKGFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRVR 493
            L+L+NT  RTKE F   +     G V+FYSCGPTVYD AHIGNFRAFLTYDV+KRWL+ +G+++ HV NLTD+DDKII ++   G SL+ELT KYA  FF DL+ LN++PA +YPRATEHI +I E V GL+ +  AYE +GS YF V+K   YG LA L+    G    A E     +    + +K D +DFALWK +K  D  +FWD+PLGKGRPGWHIEC+ MA K+LG  LD+H GGIDLVFPHHENE+AQSE  TG+PF R WVHN FVN++ EKMSKS GNF TL+       D RAFRYLVVSSQYR+ L F+ +SL+SA++T++RLD LR R
Sbjct:   20 LLLYNTLSRTKEAFTTVEP----GVVRFYSCGPTVYDYAHIGNFRAFLTYDVIKRWLLCRGYDIKHVMNLTDIDDKIIRKVRELGCSLDELTNKYADAFFADLDLLNVIPAQQYPRATEHIKEIEETVGGLVKRGYAYERDGSTYFSVAKFESYGRLAQLEKREKGSRTAAAEATEGENIDSDDYDKADMRDFALWKSYKTNDAGIFWDSPLGKGRPGWHIECTCMAIKYLGPELDIHGGGIDLVFPHHENELAQSEALTGRPFSRFWVHNGFVNINNEKMSKSLGNFQTLRDIAKKPDDARAFRYLVVSSQYRSALAFTDQSLKSARSTVKRLDALRKR 355

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1961.6320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J887_9PHAE	4.900e-301	88.82	Cysteine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP ...	[more]
D7FX39_ECTSI	9.770e-246	95.77	Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculos...	[more]
A0A835ZDL4_9STRA	2.990e-179	73.81	Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI...	[more]
W7U426_9STRA	5.770e-166	68.75	Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxI...	[more]
A0A7S0EPZ0_9CRYP	1.710e-155	64.72	Cysteine--tRNA ligase (Fragment) n=1 Tax=Hanusia p...	[more]
L1I7X3_GUITC	2.320e-155	64.81	Cysteine--tRNA ligase n=1 Tax=Guillardia theta (st...	[more]
A0A7S2S4N2_9STRA	8.060e-154	66.46	Cysteine--tRNA ligase n=1 Tax=Rhizochromulina mari...	[more]
A0A7S4UT40_GUITH	3.470e-153	64.72	Cysteine--tRNA ligase n=1 Tax=Guillardia theta Tax...	[more]
A0A7S3E8V9_9RHOD	5.630e-136	61.42	Cysteine--tRNA ligase n=4 Tax=Rhodosorus marinus T...	[more]
R7QDF8_CHOCR	3.030e-133	58.53	Cysteine--tRNA ligase n=1 Tax=Chondrus crispus Tax...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024909	Cysteinyl-tRNA synthetase/mycothiol ligase	PRINTS	PR00983	TRNASYNTHCYS	coord: 389..410 score: 69.42 coord: 358..376 score: 68.42 coord: 183..194 score: 60.98 coord: 219..228 score: 50.45
IPR024909	Cysteinyl-tRNA synthetase/mycothiol ligase	PANTHER	PTHR10890	CYSTEINYL-TRNA SYNTHETASE	coord: 153..489
IPR015803	Cysteine-tRNA ligase	TIGRFAM	TIGR00435	TIGR00435	coord: 156..489 e-value: 6.8E-116 score: 386.0
IPR015803	Cysteine-tRNA ligase	HAMAP	MF_00041	Cys_tRNA_synth	coord: 156..547 score: 27.717
IPR032678	tRNA synthetases class I, catalytic domain	PFAM	PF01406	tRNA-synt_1e	coord: 179..481 e-value: 8.0E-105 score: 350.5
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 147..473 e-value: 4.9E-120 score: 402.3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 25..30
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..547
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..24
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..30 score: 0.698
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 166..482

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1961	contig	Ecto-sp13_S_contig1961:9426..14903 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1961.6320.1	mRNA_Ecto-sp13_S_contig1961.6320.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1961 9324..14916 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1961.6320.1 ID=prot_Ecto-sp13_S_contig1961.6320.1|Name=mRNA_Ecto-sp13_S_contig1961.6320.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=548bp
MRGSSTITLGMMFATFVYLTASSWPTAASAFVTQGPSVHRTACRHYEQRQ
QRRLPASDGRTTSPHSSCFLPQKQQQKTLPTTASHSGSSGVVGSDIHHRR
HSRVRARSVAGCNGVADGSGERRWQTSSLPRSSSLLVMGGAGEGGGGAGA
EVESGLMLFNTEGRTKERFRPQDRRQDLGRVKFYSCGPTVYDMAHIGNFR
AFLTYDVLKRWLVYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKY
AKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYEVNGSVY
FRVSKHGKYGTLACLDTSGMEDGAGEGGGINDAVEFESEKEDAKDFALWK
GFKPEDGEVFWDTPLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFP
HHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLAT
ALDVRAFRYLVVSSQYRTTLGFSMKSLESAKNTLRRLDKLRVRGCTLVTH
KVCVLPGVGGVCVSVPALWLRRTMVGCVRDRRGRKHAVAVAVVRPAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024909	Cys-tRNA/MSH_ligase
IPR015803	Cys-tRNA-ligase
IPR032678	tRNA-synt_1_cat_dom
IPR014729	Rossmann-like_a/b/a_fold