prot_Ecto-sp13_S_contig1958.6309.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1958.6309.1
Unique Nameprot_Ecto-sp13_S_contig1958.6309.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1958.6309.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 4.050e-29
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0 
Query:    3 YVRVLFTEMAVVHSLLDELDPNFVVCHDWVYFGDIEQAQRVAEFIAPNEEVASMVSEALLGSATSRHKPNETLPFDAEDEISSRLQQKLDAFEYQYCG 100
            Y+RVLFT++AV+ S L E+ P F+VCHDW   GD EQA  +A FIAPN+E+A +V  +L+ +A  +      LPF+  D + SRLQ+KLDAFE  YCG
Sbjct:   17 YMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYCG 114
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BLAST of mRNA_Ecto-sp13_S_contig1958.6309.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 5.280e-25
Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = 0 
Query:    3 YVRVLFTEMAVVHSLLDELDPNFVVCHDWVYFGDIEQAQRVAEFIAPNEEVASMVSEALLGSA--TSRHKPNETLPFDAEDEISSRLQQKLDAFEYQYCG 100
            Y+RVLFT++AV+HS L E+ P FVVCHDW   GD EQA  +A FI+PN+E+AS+V  +L+ +A  +SR  P   LPF+    +  RLQ+KLDAFE+ YCG
Sbjct:  311 YMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKKSSRTDP---LPFEDAYAVVLRLQRKLDAFEHLYCG 407
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1958.6309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZI1_ECTSI4.050e-2952.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH94_9PHAE5.280e-2554.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1958contigEcto-sp13_S_contig1958:8843..10989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1958.6309.1mRNA_Ecto-sp13_S_contig1958.6309.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1958 8817..11532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1958.6309.1 ID=prot_Ecto-sp13_S_contig1958.6309.1|Name=mRNA_Ecto-sp13_S_contig1958.6309.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MAYVRVLFTEMAVVHSLLDELDPNFVVCHDWVYFGDIEQAQRVAEFIAPN
EEVASMVSEALLGSATSRHKPNETLPFDAEDEISSRLQQKLDAFEYQYCG
SNTT*
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