prot_Ecto-sp13_S_contig1958.6308.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1958.6308.1
Unique Nameprot_Ecto-sp13_S_contig1958.6308.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1958.6308.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.330e-39
Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0 
Query:   42 MHKAHPDLVRFDAELASFWKFFLIPTTMRKSSTAFTASWQQGRDQMRDLAQRAHALPAPGTVQLVTGGISYPSGNGPQKVQR 123
            M KAHPDLVRFD +L +FWKFF I TTMR SSTAFTASWQQGRDQMRDLAQRA  LP PGTVQL+TGGISYP GNGPQKVQ+
Sbjct:    1 MFKAHPDLVRFDEKLPNFWKFF-ISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQ 81
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1958.6308.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.390e-6
Identity = 43/121 (35.54%), Postives = 61/121 (50.41%), Query Frame = 0 
Query:    9 VVNKAVVSHNMRLVFQLGLEGAGHHYIIGAIEDMHKAHPDLVRFDAELASFWKFFLIPTTMRKSSTAFTASWQQGRDQMRDLAQRAHALPAPGTVQLV---------TGGISYPSGNGPQK 120
            VV K  VS  MR+VF +GLEG GHHY+   +ED+ K   D VR   +L    K      ++ KS  A+  + ++ R++M  LA       A G   +V         TG +SYP+ NG +K
Sbjct:   98 VVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKK--DKVRCP-KLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEK 215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1958.6308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1E6_ECTSI1.330e-3982.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMV4_ECTSI3.390e-635.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1958contigEcto-sp13_S_contig1958:7563..8206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1958.6308.1mRNA_Ecto-sp13_S_contig1958.6308.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1958 7563..8207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1958.6308.1 ID=prot_Ecto-sp13_S_contig1958.6308.1|Name=mRNA_Ecto-sp13_S_contig1958.6308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
EDRPPPGAVVNKAVVSHNMRLVFQLGLEGAGHHYIIGAIEDMHKAHPDLV
RFDAELASFWKFFLIPTTMRKSSTAFTASWQQGRDQMRDLAQRAHALPAP
GTVQLVTGGISYPSGNGPQKVQR
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