mRNA_Ecto-sp13_S_contig1957.6306.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 1494 bits (3867), Expect = 0.000e+0 Identity = 770/965 (79.79%), Postives = 808/965 (83.73%), Query Frame = 1
Query: 49 MKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQV----------------------------AYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRN-------------------GMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMKGGFDDTNAELRDVKDGLGMITGRLD----KVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
MKANKAT TGDWKE STV ADVEPMELQGSSVRVYDCAGQV AYTGLLQMFLTPRSVCVLVCN EF Q+ S++ VE DCRKLE LRVCDWLRS+S R+P NDVILVATKCDL GNA E G R+E ACR WLS WVRN GM PVRLEP V LTS P+ EHG S + SK GWACDWR E D+ PS + RLVNKPD GLRG Q VLPRSWDIALTVLEALEHGRDPVE VL KSPDPDG+DAAETA GKTDV+QGITVEELGTKWQETVDELERRGITVTNAKNALEGALS+REFDGSLVR E FVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDT ITLDD SDI SWDRLKKEG+LEP+LA+AMWPDGLSEYVLPTLASLGLTFPLENDP+EGLVVLLRLKPNRPESVGKVIDTFCSGLTP FSASWK FLGV PGAVEK LTR CGLG V+TFWRYGVLVHG LG DGRRTFAVVLEYSSTDNELTA+IFGD+STPAAWVALSYVM+AVRLMLVDFPGLRWKGSLKCPQHGDAMLFVD AR GDKLLEGSRCP+CSVDTGGLGAAAIDLVRFVDIRLDRDVIFN+VKA+FDDL+SQYS + PT+P QEEGELIRKIDDVATAVKGGFAEVEGG+SNLKGEM KV+EST+ESLMRIRNLQAPNYRYPRLVVVKEVG+DGT+S AH KKS+LSKLR LGKKDM LHFLCPVDMT VPCGYGG+GYR QETRGWVKKISPVLQVAVVTAKVALNATTGL VDIS+FLKDVKDGLVNELVDRT+DEEALL AVSGDDDIGAEL+RDTRASYEALKKFMDKEQVDRVKNARDGDGYIDF+DEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR
Sbjct: 1 MKANKATLTGDWKEESTVVADVEPMELQGSSVRVYDCAGQVMPSAIADNPPSGVYGQWGIVSSIDLGEVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRDSEHCGGVEGDCRKLEELRVCDWLRSISRRIPDNDVILVATKCDLAGGNAREIGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDEHGDRSAGNHGSKGGWACDWRDEEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 965
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 1419 bits (3673), Expect = 0.000e+0 Identity = 737/968 (76.14%), Postives = 798/968 (82.44%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNP-PQEEGELIRKIDDVATAVKGGF----------------------AEVEGGISNLKGEMKGGFDDTNAELRDVKDG---------------LGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
VLVG SLRQSMKANKAT TG+WKE STV ADVE MEL+GSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCN EF +QL SDN+DQVEEDCRKLEALRVC+WLRS+S RVP +VILVATKCDL GNA E GRR+E ACR WLS+W M VRLEP V LTSCFP+G GEHG+SS+ + SK WACDWR V G + SPSL+ RLVNKPD+GGLRGVQMVLPRSWDIALT L++LEHGRDPVE+V+ KSPD D + A ETA KT V+QGITVEEL KWQETVD L RRGITVTNA+NALEGALSIREFDGSLV HEKFVFLDVVWLARILKPLLNHKDQE FDGRVNLGDTGDTRITLDD +DI SWDRLKKEG+LEPRLA+A+WP+GLSEYVLPTLASLGL FPLENDP EGLVVLLRLKP+RPESVGKVIDTFCSGLTP F ASWK FLGV PGA+EK LTR CGLG VQTFWRYGVLVHGGLG D RRTFAVV+EYSSTDNEL AQIFGD+STP W A SYVM+AV LMLVDFPGL WKG L+CPQHGD MLFV+KA GDK LEGSRCP+CS DTGGLGAAAIDL+RFVDIRLDRDVIFNEVKA+F+DLESQYSFT PT+ +EE ELIRKID +ATAV+G F AEVEGG+ LGMI+GRLDKV+ESTQESLMR+R+LQAPNYRYPRLVVVKEVGSDGT+S A +KSMLSKL G+GKKDM L FLCPVDMT VPCGYGG+GYR +ETR WVKKISPVLQVAVVTAKVALNATTGL VDISDFLKDVKDGLV ELVDRTLD+EALL AV GDD+IGA+L+RDTRASYEALKKFMDKEQ++RVKN RDGDGYIDF+DEMKRV DGRGGMVWVRN+NVQKWLDS SIAAPTR
Sbjct: 348 VLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLSKSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSD-RGATETA--KTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKVEXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAAPTR 1312
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 1417 bits (3669), Expect = 0.000e+0 Identity = 724/930 (77.85%), Postives = 779/930 (83.76%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMKGGFDDTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
VLVG SLRQSMKANKATPTG+WKE STVFADVEPMEL+GSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCN EF QQL SDNVDQVEEDCRKL+ALRVCDWLRS+S RVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGM PVRLEP V+LTSCFPIGDGEHG+S+T SDASKQGWACDWRHVEGDKSSPSL+ RLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVE+VL KSPD + + ET GKT+V+Q I VEELGT W+ETVDEL +RGI VTNA+NALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQ TFDGRVNLGDTGD RITLDD SDI SW RLK EG+LEPRLA+AMWPDGLSEYVLPTLASLGLTFPLE DP+ GLVVLLRL+PNRP SVG+ IDTFCS TP FSASW+ FLGV PGA+EK LTR CGLGDVQTFWRYGVLVHGGLGDLDGR FAVV EYSST+NELTAQIFGD+ST A WVALSYV +AV LML+DFPGLRW GSLKCPQHG M F K +GDK LE RCPRCS T GLGAAAIDL+R VDIRLDR VI EVKA+FD LESQY FT P +E E +RK+D E+K GRLDKV+ESTQESL R++NLQAPNY YPRLVVVKEVGS GTSS AH KKSMLSKLRGLGKKDMRLHFLCPVDMT VPCGYGG+GY+ QETR WVK++SP LQV VVTAKVALNA TGL VDISDFLKDVKDGLV ELVDRTLDE+ALL AVSGDD +GA+L+RDTRASYEALK FM+ E+ R KNARDGDGYI+F++EMKR+ DGRGG VWVRN+NV+KWL S+S AP+R
Sbjct: 128 VLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERR-PTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLE-RRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKMD----------------------EVKAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPSR 1032
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 1323 bits (3423), Expect = 0.000e+0 Identity = 684/932 (73.39%), Postives = 757/932 (81.22%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVE-EDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMKGGFDDTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHR-KKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
VLVG SLRQSMKANKA+PTG W E STVFA+VEPMEL GSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCN EF Q+ S++ +VE EDCRKLE LRVCDWLRS+S RVP NDVILVATKCDLV GNA E G R+E++CR WLS WVRNGM PVRLEP V LTSCFPI GEHG+ S + K GWACDWR+VE D+ SPS + RLVNKPD GLRG QMVLPRSWD+AL VLEALEHGRDPVEVVLRKSP+PD D ET GK DV+QGITVEELGTKWQETVDELERRGITVTN NALEGALSIREFDGSLVRHEKFVFLDVVWL+RILKPLLNHKDQ TFDGRV LGDTGDTRITL D+SDI SWDRLK EG+LEPRLA+AMWP GLSEYVLPTL S+GLTFPLE DP+ GLVVLLRL+P+RPESVG+VIDTFCS TP FSASW+ FLGV PGA+EK LTR CGLGDVQTFWRYGVLVHGGLGDLDGR FAVV+EYSSTDNELTAQIFGD+STPA WVALSYVM+AV LMLVDFPGLRWKG LKCPQHG+ M F +K +GDK LE +CPRCS +T GLGAAAIDLV VDIRLDRDVIF EVKA+F LESQY F+ PT + E EL+RKI+D+A A+K ++TGRLD V+ESTQESLMR++NLQAPNY YPRLVVVK+ G+ G SS A K+ + SKLRG+GKKDM LHFLCPVDMT VPCG GG+GYR +E R WVKKISPVLQV +VTAKVALNA TGL VD+S FLKDV+DGL+ E+VDRTLDE+ALL AVSGD I +L+RDTRASYEALK FM+ E+ R KNARDGDGYIDF+D+MK + DGRGG VW+RN+NVQKWLDS+S AP+R
Sbjct: 411 VLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETG-GKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLE-RKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-FSCPTGSSKTEDELLRKIEDMAIAMK------------------------------------VMTGRLDTVLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSNSSPAPSR 1303
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 1289 bits (3335), Expect = 0.000e+0 Identity = 667/977 (68.27%), Postives = 751/977 (76.87%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEG-------GISNLKGEMKGGF------------------DDTNAELRDVKDGLGMIT----------------------GRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
+LVG SLRQSMK N+ATPTGDWKE STVFADVEPMEL+GSSVRVYDCAGQ AYTGLLQMFLTPRSVCVLVCN F QQ +D Q+ EDCRKLE LRVC+WLRS++ RVP ND ILVATKCDLV GNA E GRR+E ACRMWL++WVRNGM PVRLE V LTSC P GEHG+ T + + GW CDWR GD S+P L+ RLVNKPD GGLRG Q+VLPRSWDIALTVLEALE GRDPVEVV+ K + DAAE +QGITVE+L KW ETVDEL RR ITVT+AKNALEGALSIREFDGSLVRHE FVFLDVVWLARILKPLLNHKD+E+FDG VNLGDTGDTR+TL+D DI+SW RLK EG++EPRLA A+WPDGLSE+VLPTLASLGLTFPLENDP EGLVVLLR KP+ PESVGKVIDTFCS P FSASWK FLGV PGA+EK LTR C LG V+TFWR V VHGG G G FAVVLEYSS +NELTA+IFGD+STP W+ALSYVM+AV LM+ DFPGLR +GSLKCPQHGDAML K GDK LEGSRCP+CS DT GLGAAAIDLVR VDIRLDRD IF+EVK +F DLE +YSF+ P + E LI+KID VA AV GGF E++G G+ ++KG ++GGF +DT AE GRL+ V ++TQE LMR++NLQAPNY YPRLV V+EV S T S AH K +LSKLRG+GKK+M LHFLCPVDMT VPCGYGG+GYR +ETRGWVKKISPVLQVAVVTAKVALNAT GL V+IS+FLKDVKDGL +ELVDR+LDE+ALL VSG++D+ A+++ DTRASYEALKK MDKEQV R+KNARDGDGYIDF+D+MKRV DGRGGMVWVRN+NVQ+WLDSHS AP+R
Sbjct: 269 ILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTVEGGWVCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHEMXXXXXXXXXXXXXXXEDTKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRLENVFKNTQEILMRLKNLQAPNYLYPRLVAVEEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEEDVDADMQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTAPSR 1245
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 1289 bits (3335), Expect = 0.000e+0 Identity = 662/948 (69.83%), Postives = 741/948 (78.16%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISN-------LKGEMKGGFD-----------DTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
VLVG SLRQSMKAN+ TPTG+WKE STVFADVEPMEL+GSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCN A F QQL N +VEEDCRKLE LRVCDWLRS+S RVP NDVILV TKCDL GNA E G R+EHACR WLS+WVR+GM PV+LEP V+ TSCFP G+HG+ T + SK WACDW ++ D PSL+ RLVNKPD GGLRG QMVLPRSWD L VL++LE GRDPVEVVLRKS PD DA ETA G T V+QGITVE+L KWQ+ VDELERRGI VTNAKNALEGALSIREFDGSLVRHE FVFLDV+WLARILKPLLNHKDQETFDGRVNLGDTGD RITLDD I SW RLK EG+LEPRLA+AMWP GLSEYVLPTLASLGLTFPLE D +EG VVLLRLKP RP+SVG+VIDTFCS TP SASW FLGV PGA+EK LTR CGLG VQTFWRYGVLVHGGLGDL GR FAVVLEYSSTD++L QIFGD+ TPA WVALSYVM+AV LMLVDFPGLRW G+LKCPQHGDAML +K +G+ L+ RCPRCS +T GLGAAAIDL+R VDIR+DR IF+EV +FD L+ YSF +++ L R ++ + +KGG + ++GE++ GF V+ESTQESLMR++NLQAPNY YPRLVVVKEVGS GTSS AH KKSML+KLRGL KKDM LHFLCPVDMT VPCGYGG+G+R ++TRGWV+KISPVLQVAVVTAKVALNATTGL VD SDFLKDV+DGLV ELVDRTLDE AL V+G++ IGA+++R TRASYEALKKFMDKE++ R K+A+DGDGY+ F+DEMKRV DG+GGMVWVRN NVQKWL+S AAPTR
Sbjct: 147 VLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLK-RRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDALKGHYSFDGQAGSSKKKDGLTRMVESIIKTMKGGVDDXXXXXXXXXXXXXXVQGEVRRGFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLESTQESLMRLKNLQAPNYLYPRLVVVKEVGSGGTSSKAHGKKSMLTKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKDVRDGLVGELVDRTLDEHALRRVVTGEEAIGADMQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKWLESR--AAPTR 1091
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 1251 bits (3237), Expect = 0.000e+0 Identity = 641/930 (68.92%), Postives = 730/930 (78.49%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMKGGFDDTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
+LVG SLRQSMKAN A PTG+WKE STVFADVEPM+L+GS VRVYDCAGQVAYTGLLQMFLTPRSVCVLVCN F QQ D QV+EDCRKLE LRVCDWLRS+S RVP NDVILVATKCDLV GNAEE GRR+E A R WL++WV +GM PVRLEP V LTSC GE+G+ ST +AS++GWACDWR D P LV RLVNKPD GLRG QMVLPRSWDIALTVLEALE GRDPVEVV+ +PD +DA TA +T V+QGITVE L KWQE V L RRG+ VTNAKNALEGALSIREFDGSLVRHE FVFLDVVWLARILKPLLNHKD+ETFDG VNLGDTGDTR+TL+D DI SW RLK +G+LEPRLA MWP+GLS+YVLPTLASLGLTFPL+NDP GLVVLLRL P+RPE VGKVIDTFC TP FS SWK FLGV GA+EK LTR C LG VQTFWR GVLVHGGLGD DG FAVVLEYSS+DNELTAQIFGD+STPA WVALSYV++AVRLML+DFPGLR +GSLKCPQHGDAML V+K +G KLLE S CP+CS DT GLGAAAIDLV VDIRLDRDVIF +VK +F +LESQYSF+ +E LI+K+++VA R +KDGL + GRL KV++STQESLMR++NLQA NY YPRLV V+E+ S GT S AH +L+KLRG+G K+M LHFLCPVDMT VPCGYGG+GYR +E R WVKK+SPVLQVAVVTAKVAL AT+GL VD+S+FLKDV+DG V+ELVD+TLDE+ LL V G++D G +R++TRASYEAL+ FM K ++R K+ARDGDGY+DF+D M+R++DGRGG VWVRN+NV++WLDSHS A P+R
Sbjct: 241 ILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVA--------------------------------RTLKDGLDDLKGRLGKVLDSTQESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGK--LERRKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNAVPSR 1136
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 1221 bits (3158), Expect = 0.000e+0 Identity = 626/931 (67.24%), Postives = 726/931 (77.98%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRS-DNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMKGGFDDTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
+LVG SLR+SMKA +ATPTG+WKE STVFADVE MEL+GSS+RVYDCAGQVAYTGLLQMFLTPR+VCV+VCN F QQ + + QV+EDCRKLE LRVCDWLRS+S RVP NDVILVATKCD V GNA E G+R+E A RMWL++WVR+GM PVRLEP V LTSC E G+ STR+ A + GW CDWR + D SPSL+ RLVNKPD GGLRG QMV+PRSWDIALTVLEALE GRDPVE+V+ D DG DA TA KT ++ GIT E+L TKWQE L R ITVTNA NALEGAL+IREFDGSLVRHE FVFLDVVWLARILKPLLNHKD+ETFDG VNLGDTGDTR+TL+D SDI SW RLK EG+LEPRLA +WP+GLSEYV+PT+ASLGLTFPLENDP GLVVLLRL+ +RPE VGKVIDTFC TP ASWK FLGV GA+EK LTR C LG VQTFWR GVLVHGG+G+ D FAVVLEYS +DNELTAQIFGD+STPA WVALSYV++AV LML+DFPGLR +GSLKCPQHGDAM + +GDK+LEGSRC +CS DT GLGAAAIDLVR VDIRLDRDVIF EVKA+F DLE QYSF+ T +EG L++K+++VA +K GFDD + GRL KV++STQESLMR++ LQAPNY YPRLV ++E+ S GT + A K +LSKLRG+G K+M LHFLCPVDMT VPCGY G GYR +ETR WVKK+SPVLQVA+VTAKVA+ AT+GL VD+SDFLKDV DGLV+ELVDR LDE+ L VSG++D+G ++++ TRASYEAL + M K ++R K+ARDGDGY+DF++ M+R++DGRGG VWVRN+NVQKWLDSHS AAP+R
Sbjct: 340 ILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVART------------------LKDGFDD--------------LKGRLSKVLDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGK--LERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPSR 1236
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 1210 bits (3131), Expect = 0.000e+0 Identity = 629/949 (66.28%), Postives = 712/949 (75.03%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMK----------------------GGFDDTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAA 2781
VLVG SLRQSMKAN+ATPTG+WKE STVFADV+PMEL+GSSVRVYDCAGQV YTGLLQMFLTPRSVCVLVCN+ F Q+L S+ QV+EDCRKLE LRVC WLRS+S RVP +DVILVATKCDL GNA + G+RL HACR+WLS WVRNGM PVRLE V LTSC P EHG+SS + +K GW CDWR D SSPSL+ RLVNK D GGLRG QMVLPRSWD+ALTVLEALE GRDPVE+VL+ D ++ +TAE TDV+QGI VE+L KWQ TVD L + GI VTNA NALEGALSIR I KPLLNHKD+ET++G VNLGDTGD +ITL+D DI SW R K EG+LEPRLA+ MWPDGLSEYVLPTLASLGLTFPLENDP GLVVLLRLKP+RPE VGKVI TFC TP F+A+WK FLGV PGA+EK LTR C LG VQ FWR GVLVHGGLGD DG FA VLEYSS +N LTAQIFGD S AAWVALSYVM+AV LML+DFPGLRW+GSLKCPQHGD +L +K +GDK L GSRC +CS DT LGAAAIDLVR V++RLDRDVIF EVK +F +LE QY F P +EE LIRKI++V AV GGFAE + G+ +KGE++ +TQESLMR++NLQAPNY YP LV V+E G+DGT S A KSML K+RG+GK DM LHFLCPVDMT VPCGYGGKGYR +ETRGWVKKISPVLQVA+VTAKVAL AT+GL VD+SDFLKDVKDGLV ELVD TLDE+ALL VSG++D+GA++R+DTRASYEALKKFMDKEQ+DR+KNARDGDGY+DF+D+MKRV DGRGGMVW+RN+NVQ+W DS S AA
Sbjct: 599 VLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNVEAFEQRLGSEANGQVQEDCRKLEELRVCHWLRSISRRVPYSDVILVATKCDLACGNAGDMGKRLAHACRLWLSNWVRNGMQPVRLEHGVCLTSCCPAAVSEHGESSPGNHYAKGGWGCDWRDHRDDSSSPSLLHRLVNKLDGGGLRGAQMVLPRSWDMALTVLEALELGRDPVEMVLQTLAGADRENLTDTAEANTDVYQGIAVEDLNAKWQATVDGLAKGGIAVTNADNALEGALSIR----------------------IPKPLLNHKDEETYEGFVNLGDTGDKQITLEDPLDIASWWRHKNEGVLEPRLAYCMWPDGLSEYVLPTLASLGLTFPLENDPTGGLVVLLRLKPDRPERVGKVIYTFCLDQTPAFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSRCQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTQESLMRLKNLQAPNYLYPGLVAVEETGADGTPSGARGMKSMLHKVRGVGK-DMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDVKDGLVGELVDPTLDEDALLRIVSGEEDVGADMRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDSRSNAA 1524
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 1166 bits (3017), Expect = 0.000e+0 Identity = 638/930 (68.60%), Postives = 675/930 (72.58%), Query Frame = 1
Query: 1 VLVGNSSLICGSLRQSMKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNLAEFRQQLRSDNVDQVEEDCRKLEALRVCDWLRSMSLRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMHPVRLEPRVALTSCFPIGDGEHGKSSTRSDASKQGWACDWRHVEGDKSSPSLVSRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDGQDAAETAEGKTDVFQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTRITLDDRSDIISWDRLKKEGILEPRLAHAMWPDGLSEYVLPTLASLGLTFPLENDPNEGLVVLLRLKPNRPESVGKVIDTFCSGLTPTFSASWKFFLGVSPGAVEKALTRSCGLGDVQTFWRYGVLVHGGLGDLDGRRTFAVVLEYSSTDNELTAQIFGDMSTPAAWVALSYVMTAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDKARSSGDKLLEGSRCPRCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNEVKAKFDDLESQYSFTRPTNPPQEEGELIRKIDDVATAVKGGFAEVEGGISNLKGEMKGGFDDTNAELRDVKDGLGMITGRLDKVVESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTSSNAHRKKSMLSKLRGLGKKDMRLHFLCPVDMTVVPCGYGGKGYRCQETRGWVKKISPVLQVAVVTAKVALNATTGLTVDISDFLKDVKDGLVNELVDRTLDEEALLGAVSGDDDIGAELRRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFKDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 2790
VLVG SLR+SMKANKATPTGDWKE STVFADVEPMELQGSSVRVYDCAGQV F +G VS+ K DPVEVV+ KSPDPDG+DAAETAEG TDV+QGITVEEL TKWQETVDELERRGITVTNAKNALEG+LS+REFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDT ITLDD SDI SWDRLKKEG+LEPRLA+AMWPDGLSEYVLPTLASLG TFPLENDP+EGLVVLLRL PNRPESVGKVIDTFCSGLTP FSASWK FLGV PGAVEK LTR CGLG V+TFWRYGVLVHG G DGRRTFAVVLEYSSTDNELTA+IFGD+STPAAWVALSYVM+AV+LML+DFPGLRWKGSLKCP+HGDAMLFVDKAR GDKLLEGSRCP+CSVDTGGLGAAAIDLVRFVDIRLDRDVIF EVKA+FDDL+SQYS + PT+P QEEGELIRKIDDVA AV+ ++K EMK GF MI+ RLDKV+ESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGT+S AH KKS+LSKLR LGKKDM LHFLCPVDMT VPCGYGG+GYR QETRGWVKKISPVLQVAVVTA+VALNATTGL V+IS+FL+DVKDGLVNELVDRTLDEEALL AVSGDDDIGAEL+RDTRASYEALKKFMDKEQVDRVKNARDGDGYIDF+DEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR
Sbjct: 65 VLVGQEGAGKTSLRKSMKANKATPTGDWKEESTVFADVEPMELQGSSVRVYDCAGQVV------------------------------------------------------------------------------------------------------------EAKYNRSFHLGS---------------------------------VSKAKVK-------------------------------DPVEVVVHKSPDPDGEDAAETAEGTTDVYQGITVEELSTKWQETVDELERRGITVTNAKNALEGSLSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDIKSWDRLKKEGVLEPRLAYAMWPDGLSEYVLPTLASLGFTFPLENDPDEGLVVLLRLTPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFVDKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVARAVR-----------SVKKEMKDGFI--------------MISERLDKVLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAAPTR 797 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1957.6306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1957.6306.1 >prot_Ecto-sp13_S_contig1957.6306.1 ID=prot_Ecto-sp13_S_contig1957.6306.1|Name=mRNA_Ecto-sp13_S_contig1957.6306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=915bp MKANKATPTGDWKEASTVFADVEPMELQGSSVRVYDCAGQVAYTGLLQMFback to top mRNA from alignment at Ecto-sp13_S_contig1957:5230..14027- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1957.6306.1 ID=mRNA_Ecto-sp13_S_contig1957.6306.1|Name=mRNA_Ecto-sp13_S_contig1957.6306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1957:5230..14027- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1957:5230..14027- >mRNA_Ecto-sp13_S_contig1957.6306.1 ID=mRNA_Ecto-sp13_S_contig1957.6306.1|Name=mRNA_Ecto-sp13_S_contig1957.6306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2745bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1957:5230..14027- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |