mRNA_Ecto-sp13_S_contig1956.6302.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI) HSP 1 Score: 285 bits (730), Expect = 2.320e-85 Identity = 147/184 (79.89%), Postives = 147/184 (79.89%), Query Frame = 2
Query: 3242 MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 3793
MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEA GFGGNNAS YENTRPGYPA ALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTR ILPFALSEG GEAIP PDSS RALVA QSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR
Sbjct: 1 MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTRNILPFALSEG----------------------------AGEAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A3G8GE75_9BURK (Class I SAM-dependent methyltransferase n=7 Tax=Burkholderiales TaxID=80840 RepID=A0A3G8GE75_9BURK) HSP 1 Score: 168 bits (426), Expect = 4.980e-43 Identity = 112/283 (39.58%), Postives = 152/283 (53.71%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELFYDTEVYWCNKT 4171
+H AADG+ A Y RP YP I +R + +G ++DLGAGTGKFT P L+ G S++AVEPV AM D+ AA PGVR + G +AIP PD+SV +V AQ+FHW ++A L E+HRVL PGG L+WN RD PWV A++ I++ F G D PR G WRQ+F P G FG + E+H+ + + E+ + +RS S I+ P +RA R Q +++ P+ LR V L YDT Y +T
Sbjct: 7 IHHSAADGYT-KGADTYVRGRPDYPPE----IAWWLRDTLGLHAGATVLDLGAGTGKFT----PRLLATGASVIAVEPVAAMLDKLAAAHPGVRPLVGTADAIPLPDASVDVVVCAQAFHWFATAEALDEIHRVLKPGGRLGLVWNMRDANVPWVAAIDRIVNEFEG-DAPRYYTGAWRQAF-----------PHPG------FGPMDERHYANGHTGSPEDVILNRVRSTSFISALPPEQRAGVDQRLQALIQAEPE----LRGHAAVTLPYDTAAYCLART 258
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A3P4AWJ1_9BURK (Putative methyltransferase YcgJ n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4AWJ1_9BURK) HSP 1 Score: 167 bits (424), Expect = 8.690e-43 Identity = 111/280 (39.64%), Postives = 150/280 (53.57%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELF--YDTEVY 4156
+H AADG+ A Y RP YP + I+ +R + +G +VDLGAGTGKFT P + G +++AVEPV +M D+ AA+PGVR + G EAIP PD+S A+V AQ+FHW + AA L E+HRVL PGG L+WN RD PWV L+ I++ Y ND PR G WR +F P G FG L E+H+ + E + +RS S IA PERER + + +++ P+ L GR E+ YDT +
Sbjct: 7 IHHAAADGYT-QQADAYVRGRPDYPTQ----IDGWLRDAVGLRAGTTVVDLGAGTGKFT----PRLAATGATVIAVEPVPSMLDKLTAALPGVRALTGTAEAIPLPDASADAVVCAQAFHWFAHAAALDEIHRVLKPGGRLALVWNMRDARVPWVARLDAIVNA-YENDAPRFYTGAWRAAF-----------PHAG------FGPLDERHYPNRHAGPPEHVILDRVRSTSFIAALPERERTQVDTQLRALIDAEPE------LHGRPEVAVPYDTAAF 253
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A0K1ECS6_CHOCO (SAM-dependent methyltransferase n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1ECS6_CHOCO) HSP 1 Score: 163 bits (413), Expect = 2.430e-41 Identity = 101/259 (39.00%), Postives = 137/259 (52.90%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEELEGGMRSISVIATRPERERADAFLRAQRVVETHPDTR 4102
+H+ AA GF A YE RP YP +A+ + +R +G +L+DLGAGTGK TR ++ S G+ L+AVEPV+ MR + A PG+ ++ GV EAIP PD+SV A++AAQSFHW + L E+HRVL P G L+WN RD WV L +I+D +G + P +G WR T P F +AE+ H++ L E L SIS IA P ER +++ HPD R
Sbjct: 3 LHSLAAQGFSAA-ADAYERGRPDYPPQAIEILTDALRLH----AGRVLLDLGAGTGKMTRLLV----SSGVRLIAVEPVEEMRQKLAGATPGLEILDGVAEAIPLPDASVDAVIAAQSFHWFHADLALPEIHRVLRPEGRVALVWNMRDTGVAWVARLSEILDR-HGREAPHYRGFAWRADL--------STSP--------LFEPVAEREVSHTQELDAEGLAERAASISYIAALPTAERLAVLREVRQLAAEHPDLR 235
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A8J6VPN7_9CYAN (Methyltransferase domain-containing protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6VPN7_9CYAN) HSP 1 Score: 163 bits (413), Expect = 2.570e-41 Identity = 102/281 (36.30%), Postives = 141/281 (50.18%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEELEGGMRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELFYDTEVYWCNK 4168
VH A GF A YE RPGYPA A+ ++ + S T +VDL AGTGKFTR++ G +VA+EPV+ MR +FEA +P + V+ G E+IP +S + AQ+FHW A L E+HRVL PGG L+WN RD + WV + II P G D PR + GQWR +F + F L Q F ++ L+ + SIS IA + + + + ++E HP TR+ +E Y TEV+WC +
Sbjct: 7 VHAAARQGFQ-IGADAYERGRPGYPAAAIEFLQQTLNLSSAT----TVVDLAAGTGKFTRQLQDL----GCQVVAIEPVEGMRQKFEALLPNIPVLNGTAESIPLAAASTDVVTVAQAFHWFQGEAALAEIHRVLKPGGYLGLIWNVRDESFDWVAQISAIITPHEG-DAPRYRTGQWRTAFEQTD----------------LFTPLETQIFSYAHQYDLDAAIDRVASISFIAALNAQTQQTVLRQVRELLEHHPQTRD----RPIIEHPYRTEVFWCTR 257
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A3G8H8L0_9BURK (Class I SAM-dependent methyltransferase n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A3G8H8L0_9BURK) HSP 1 Score: 163 bits (412), Expect = 3.110e-41 Identity = 112/282 (39.72%), Postives = 146/282 (51.77%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKL-LTLEELEGGMRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELFYDTEVYWCNK 4168
+H AA GF A Y RP YP A+ +R + G +VDLGAGTGKFTR + P G S+VAVEPV AMR Q A +P VR + G E++P D+SV A+V AQ+FHW ++AA +RE+HRVL PGG L+WN RD PWV AL I+ P+ G D PR G W++ F P G FG LA F ++ + + + S+S IA+ P E+ R Q V++T P LR V Y TE Y C +
Sbjct: 4 LHPAAAQGFS-TQADTYARGRPDYP----EALGHWLRDTLGVAPGATVVDLGAGTGKFTRLLAP----SGASVVAVEPVDAMRAQLSARLPDVRALAGSAESMPLADASVDAVVCAQAFHWFANAAAMREIHRVLKPGGRLGLIWNVRDEATPWVAALTAIMTPYEG-DAPRFYQGDWKRVF-----------PAPG------FGPLALARFPYTHTGAPAQVIVDRVMSVSFIASLPAVEQDAVRARLQAVIDTDP----ALRGRDVVAFPYSTEAYCCTR 254
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A7U9Q2G0_PSEFL (Methyltransf_11 domain-containing protein n=23 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7U9Q2G0_PSEFL) HSP 1 Score: 163 bits (412), Expect = 3.400e-41 Identity = 108/282 (38.30%), Postives = 147/282 (52.13%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEE-LEGGMRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELFYDTEVYWCNK 4168
+H AADG+ A Y RP YP A+E +R + G G ++VDLGAGTGKFT +L + G ++AVEPV+ MR + AA P +V+ G EA+P D+SV LV AQ+FHW + A L E+HRVL PGG L+WN RD PWV L+ I++ D PR G WRQ+F P G FG L EQHF T E+ + +RS S IA P+ ER + ++++ P LR +V + Y T ++C +
Sbjct: 6 IHHAAADGYQ-QAADTYVRGRPDYPP----ALEPWLRETLGLGPGRVVVDLGAGTGKFTGRLL----ATGAQVIAVEPVEQMRARLAAAQPEAQVLEGSAEALPLKDASVDVLVCAQAFHWFAHRAALEEIHRVLKPGGKLALVWNLRDARVPWVARLDAIVNALQA-DTPRYYTGAWRQAF-----------PHPG------FGPLQEQHFTQGHSGTPEDVIFNRVRSTSFIAALPQAEREAVDRQIVALIDSEPQ----LRGKAQVTVPYTTAAFYCTR 256
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: UPI001F0B79BD (class I SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. LAM7114 TaxID=2487275 RepID=UPI001F0B79BD) HSP 1 Score: 162 bits (411), Expect = 4.240e-41 Identity = 107/278 (38.49%), Postives = 146/278 (52.52%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEELEGGMRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELFYDTEVYW 4159
VH A G+ A +YE +RP YP AL AE+ + +G +VDLGAGTGKFTR + AL+ G +VAVEPV MR++ +PGV V G EA PD+S A+VAAQS+HW A L EV R+L PGG L+WNT D + PWVR +DII F D+P G WR++F R +G ++E+H+ + T+ ++ M S S +A E+ V+ +H TR GR++L Y T+VYW
Sbjct: 3 VHHAAGVGYQ-RAAGVYERSRPSYPMAAL----AELADALPLEAGRRVVDLGAGTGKFTRLL---ALT-GAEVVAVEPVAEMRERLAELLPGVNVTAGTAEATGLPDASADAVVAAQSWHWFQEADALAEVERLLRPGGALALVWNTYDTSVPWVRDFQDIIFRFAPRDLPSPLDGGWRKAFAG----------------RDGWGAISERHWPNPHSTTVTDVVERMMSSSHVAVMSPAEQEGVRAEVLSVLGSHDATRR----EGRIDLPYTTDVYW 251
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A017SW64_9DELT (Methyltransferase n=1 Tax=Chondromyces apiculatus DSM 436 TaxID=1192034 RepID=A0A017SW64_9DELT) HSP 1 Score: 162 bits (411), Expect = 4.490e-41 Identity = 102/259 (39.38%), Postives = 135/259 (52.12%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEELEGGMRSISVIATRPERERADAFLRAQRVVETHPDTR 4102
+H AA GF A YE RP YP RA+ + +R +G L++LGAGTGK TR ++P G ++A+EPV+ MR + A P V V+ GV EAIP PD+SV A+VAAQSFHW + L ++HRVL PGG L+WN RD PWV L +I+D +G + P G WR DL S + F + E+ HS+ L L SIS IA P E+A + + + HPD R
Sbjct: 3 LHHLAAQGFSAA-ADAYERGRPDYPPRAIEILADSLRLQ----AGRALLELGAGTGKMTRLLVP----TGARILAMEPVEEMRGKLAQAAPSVEVLDGVAEAIPIPDASVDAVVAAQSFHWFHADLALPQIHRVLRPGGRMALVWNMRDARVPWVARLSEILDR-HGREAPHSWSGAWRA---DLASS-------------ALFEPVVEREISHSQDLDGRGLAERAASISYIAALPPAEQALVLAEVRALADEHPDLR 235
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Match: A0A126S4J6_PSEPU (Methyltransferase n=17 Tax=Pseudomonas TaxID=286 RepID=A0A126S4J6_PSEPU) HSP 1 Score: 162 bits (409), Expect = 8.070e-41 Identity = 109/290 (37.59%), Postives = 146/290 (50.34%), Query Frame = 2
Query: 3326 VHTEAADGFGGNNASLYENTRPGYPARALRAIEAEIRRSGLTGSGELLVDLGAGTGKFTREILPFALSEGLSLVAVEPVKAMRDQFEAAVPGVRVVGGVGEAIPFPDSSVRALVAAQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVRALEDIIDPFYGNDVPRQQGGQWRQSFRDLEQSRDDTRPDNGQKHRSFFGELAEQHFKHSKLLTLEELEGG---------MRSISVIATRPERERADAFLRAQRVVETHPDTREGLRLSGRVELFYDTEVYWCNK 4168
VHT A+ GF +S YE RP YP A++ +R + +G ++DLGAGTGKFTR + A L AVEPV AMR++F +P V V+ G + IP D+S + LV AQ+FHW + AA LRE+HRVL PGG L+WN RD T WV + +II P+ G D PR G+WR +F A F +L TL + G +RS+S IA P+ E+ R Q +V+ HP L+ RV Y T+ Y C +
Sbjct: 4 VHTSASTGFS-RQSSNYEQGRPDYPV----ALQGWLRDTLGIDAGTPVLDLGAGTGKFTRLLTALAPR----LTAVEPVAAMRERFHERLPEVPVLEGTAQHIPLADASQQVLVCAQAFHWFADAAALREMHRVLAPGGRLGLIWNVRDETVDWVARITEIITPYEG-DTPRFHTGRWRDAF-------------------------AGSRFSAPQLTTLPHVHEGNPQTVILERLRSVSFIAALPQAEQDRVMARLQDLVDNHP----ALKGRERVAFPYQTQAYVCQR 254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1956.6302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1956.6302.1 >prot_Ecto-sp13_S_contig1956.6302.1 ID=prot_Ecto-sp13_S_contig1956.6302.1|Name=mRNA_Ecto-sp13_S_contig1956.6302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=315bp MRGQARLSALLSRVRPPFVPPSTKAGRWVHTEAADGFGGNNASLYENTRPback to top mRNA from alignment at Ecto-sp13_S_contig1956:5658..14220- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1956.6302.1 ID=mRNA_Ecto-sp13_S_contig1956.6302.1|Name=mRNA_Ecto-sp13_S_contig1956.6302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8563bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1956:5658..14220- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1956:5658..14220- >mRNA_Ecto-sp13_S_contig1956.6302.1 ID=mRNA_Ecto-sp13_S_contig1956.6302.1|Name=mRNA_Ecto-sp13_S_contig1956.6302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=945bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1956:5658..14220- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |