mRNA_Ecto-sp13_S_contig1953.6288.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1953.6288.1
Unique NamemRNA_Ecto-sp13_S_contig1953.6288.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: D7FU86_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU86_ECTSI)

HSP 1 Score: 896 bits (2315), Expect = 0.000e+0
Identity = 467/505 (92.48%), Postives = 474/505 (93.86%), Query Frame = 1 
Query:    1 RGEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPYVVAAPRGPFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVASSSRGTADSAGPEGSGSPSAGSGAP--GRRGYVENPHDRSTWRGPGDDPFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQALFELGAEENGLRTFRQTAKVSAVIPEDPKLGSGRVGVVAKVFRVVSRREVEGSAGXXXXXXXXXXXXCFVVVLRRKRGDYYRYRKVEELLVARLTTKDMSVKDSDVMEQSGVSMSPIP 1509
            +GE VALKVMDKLDPRDPSY RRSSRLNDEVLAMQRCGSHEHTVSLI AMFD TYPRRNG+LTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGRE M+C SIVGSRTYMAPEVLNLGQSYAYGDDA YDA KADVWSSGVILFTMLAGHPPMEKANESDWWFRALKL RQDLFWQSHQNTAP LPEDAKHLIQAMLTV+PAHRINVDQIMNHPYVVAAPRG FWKGRPEDPRAVLREKMQELYEQSMASKRLCTV SSSRGTADSAGPEGSGSPSA       G  GYVENPHDR TWRGPGDD FEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQALFELGAEENGLRTFRQTAKVSAVIPEDPKLGSGRVGVVAKVFRVVSRREVEGSAGXXXXXXXXXXXX      RRKRGDYYRYRKVEELLVARLTTKDM+V D DVMEQSGV+MSP+P
Sbjct:  176 KGETVALKVMDKLDPRDPSYYRRSSRLNDEVLAMQRCGSHEHTVSLIRAMFDATYPRRNGDLTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGRERMICSSIVGSRTYMAPEVLNLGQSYAYGDDAAYDATKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLGRQDLFWQSHQNTAPLLPEDAKHLIQAMLTVNPAHRINVDQIMNHPYVVAAPRGAFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVPSSSRGTADSAGPEGSGSPSAXXXXXXRGSAGYVENPHDRPTWRGPGDDLFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQALFELGAEENGLRTFRQTAKVSAVIPEDPKLGSGRVGVVAKVFRVVSRREVEGSAGXXXXXXXXXXXXXXXXXXRRKRGDYYRYRKVEELLVARLTTKDMNVHDRDVMEQSGVNMSPMP 680
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A6H5KK56_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK56_9PHAE)

HSP 1 Score: 824 bits (2128), Expect = 2.520e-295
Identity = 415/445 (93.26%), Postives = 423/445 (95.06%), Query Frame = 1 
Query:    4 GEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPYVVAAP--RGPFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVASSSRGTADSAGPEGSGSPSAGSGAPGRRGYVENPHDRSTWRGPGDDPFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQALFELGAE------ENGLRTFRQTAKVSAVIPEDPKLGSGRVGVVAKVFRVVSRREVEGS 1314
            G+MVALKVMD+LDPRDPS+ RRSSRLNDEV AM+RCGSHEHTVSLI AMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPP+VCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLD+DFTLKIADFGFAALGRE M C SIVGSRTYMAPEVL LGQSYAYGDDA YDA KADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTV+PAHRINVDQIMNHPYVVAA   RGPFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVASSSRGTADSAGPE SGSPSAGSGAPGR GYVENPHDRSTWRGPGDDPFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQ LFELGAE      ENGLRTFRQTAKVSAVIPE+PKLGSGRVGVVAKVFRVVSRRE EGS
Sbjct:  253 GKMVALKVMDRLDPRDPSFHRRSSRLNDEVHAMRRCGSHEHTVSLIEAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPVVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDADFTLKIADFGFAALGRERMNCSSIVGSRTYMAPEVLKLGQSYAYGDDAAYDATKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVNPAHRINVDQIMNHPYVVAASASRGPFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVASSSRGTADSAGPECSGSPSAGSGAPGRGGYVENPHDRSTWRGPGDDPFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQVLFELGAEIAGVNKENGLRTFRQTAKVSAVIPEEPKLGSGRVGVVAKVFRVVSRREDEGS 697
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A6A7G7B6_9CRUS (CBL-interacting serine/threonine-protein kinase n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G7B6_9CRUS)

HSP 1 Score: 204 bits (519), Expect = 4.090e-56
Identity = 112/262 (42.75%), Postives = 155/262 (59.16%), Query Frame = 1 
Query:    4 GEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFA-ALGREHMMCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPY 786
            G+  ALK++ K   R         ++  E+ AM +   HE+ + L+   FD  YP+ +G + +  ++VLEL   GE F+ LS  G FP  + +E+FRQL+ G++ CH NGV HRD+KPENLLLD  F LKIADFGF+  L  ++    +  G++ YMAPE+L +   Y          +K D+++ GV+LF MLAG PP + A  SDWWF  L + R  LFWQ+H  TA    E AK LIQ +L  DP  RI + QIM HP+
Sbjct:   30 GQKAALKILIK--NRFILQDTALRQVKAEIQAMSKI-QHENVIRLLDYSFDAQYPKSDGTVVDVMLVVLELASGGEFFDFLSYTGRFPEPISREFFRQLIGGLEACHLNGVAHRDVKPENLLLDDQFRLKIADFGFSKVLSSDNDTMATECGTKGYMAPEIL-MHNHYT---------MKTDIFACGVVLFIMLAGFPPFQIATRSDWWFHKLLVGRHGLFWQAHSRTAQ-FSETAKDLIQRLLEPDPEKRITLTQIMKHPW 277
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A7S2VUU2_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2VUU2_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 2.870e-53
Identity = 109/262 (41.60%), Postives = 148/262 (56.49%), Query Frame = 1 
Query:   13 VALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGS--HEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPYVV 792
            VALK++ KL          +SR+      ++  G+  H++ V L    ++  YP  +G  T+A ++ LELCE GELF+ L   G F   V + YF QLM G++ CH  GV HRDLKP+NLLLD++F LKIADFGFA +   + M  + VG+  YMAPEV+  G SY             D+WS GVILF M AG+PP    N++DWWF  L       FW +H+       +D K LI  MLTVD + R +++ I  HP+ V
Sbjct:    3 VALKILWKLK-------ENASRVRSVKAELKALGTVKHDNVVKLKGVDWEGQYPHNDGTKTDAAVITLELCENGELFDYLMHTGSFSEEVSRTYFHQLMNGLEACHTAGVVHRDLKPDNLLLDTNFRLKIADFGFAVMPESNEM-HTTVGTEKYMAPEVVR-GLSYTKA---------CDIWSCGVILFVMYAGYPPYVSPNKNDWWFDKLLKGNFKYFWMAHEQQRK-FEDDFKDLINQMLTVDESKRASIEDIKKHPWFV 245
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A4D9CWE3_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWE3_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.000e-49
Identity = 99/259 (38.22%), Postives = 151/259 (58.30%), Query Frame = 1 
Query:    4 GEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHM-MCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMN 777
            G+ VALK++DK      +  R   +L  E+ A++    H + + L+    D  Y ++NG    +  L L+L   GELF+ +   G F  +V +  FRQL+  +++CHD  + HRD+KPENLLLDS+F LKIADFG AA+  + + + R+  G+R+YMAPE+L            GY+  K DVWS GV+LF +LAG+PP + A   DWWF AL  +  + FW++H   AP  P  A+  + ++    P+ R N +Q+++
Sbjct:  344 GQEVALKIIDK----SKAVKRTLLQLRTEITALKTV-RHPNVLELLHVELDAIYVKKNGTKVPSIALALQLAAGGELFDFMMYTGYFREVVARTLFRQLVGAMQYCHDRNIYHRDIKPENLLLDSNFQLKIADFGLAAIRSDPLDVLRTECGTRSYMAPEILQ---------HEGYEGEKVDVWSMGVVLFILLAGNPPFQMARRGDWWFNALLENDWERFWKAHLKYAPHFPPAAQTFLSSLFQPIPSRRPNTEQVLH 588
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: W2L4W4_PHYPR (CAMK protein kinase, variant n=10 Tax=Phytophthora TaxID=4783 RepID=W2L4W4_PHYPR)

HSP 1 Score: 184 bits (468), Expect = 3.050e-49
Identity = 108/266 (40.60%), Postives = 148/266 (55.64%), Query Frame = 1 
Query:    7 EMVALKVMDKLDPRDPSYPRRSSRLN--DEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAAL--GREHMMCRSIV--GSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPY 786
            + VALKV+D       +   R S +N   EV AM R  SH + + L+S   D  YP+++G +    ++VLEL   GELF+ +   G F   + + YF+QL+ G++ CH  GV HRD+KPENLLLD  F LKIADFG + L  G +  M       G+R YM+PEVL+            Y+   ADVWS+GV+LF MLAG PP + A   DWWFRA    + + FW +H  +A   P  A  L+  +  V P  RI + +I  HP+
Sbjct:   64 QRVALKVIDM------AKLNRKSMINVYREVEAMSRV-SHTNVLRLLSVHDDVPYPKKDGNVKQVIVIVLELATGGELFDFMMYTGCFAENIARAYFQQLVAGLEACHAQGVYHRDIKPENLLLDETFALKIADFGLSGLREGADGAMAELYTQCGTRGYMSPEVLSC---------LPYEGEPADVWSAGVVLFIMLAGFPPFQIATSQDWWFRACAAKQHEAFWAAHARSATFSP-GAMSLMTRIFHVKPQERITLAEIKTHPW 312
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A6V3TQB6_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3TQB6_9EUKA)

HSP 1 Score: 174 bits (442), Expect = 1.700e-45
Identity = 97/257 (37.74%), Postives = 152/257 (59.14%), Query Frame = 1 
Query:    4 GEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIM 774
            G+ VALK++ KL+    +  +    +  ++ A+ +   H + ++L+ A  +     + GE  N P++VLEL E  EL + L   G F   V + YF QL+  +K CHD G+ HRDLKP+NLLLD++F LKIADFGF++   +  +  +  G+++YMAPE+  + +    G   GY     D+WS+GVILF M AG PP ++ ++ DWWF  LK     +FW++H+   P    D K LI+ +L VDP  R ++++I+
Sbjct:   35 GKKVALKIL-KLEKLHGNL-KYMQAMEADIAALLKI-KHPNVLNLLQADLNA----KMGE-KNCPVMVLELAENWELMDYLMYTGSFSEGVARTYFHQLIDAMKTCHDKGIRHRDLKPDNLLLDANFQLKIADFGFSS---DQDIMYTYTGTKSYMAPEIAAIRE----GKTNGYTK-ACDIWSAGVILFIMSAGFPPYQEPSKDDWWFTRLKSKNFKMFWKAHETHHPQFTADFKELIEKILQVDPQKRASIEEIV 275
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A7S2Y0A9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A9_9STRA)

HSP 1 Score: 159 bits (401), Expect = 7.620e-42
Identity = 81/193 (41.97%), Postives = 107/193 (55.44%), Query Frame = 1 
Query:  229 ELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIV--GSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPYVVAAP 801
            +LF  +S  G F  +  K  F+Q++ G++ CHD GV HRDLKPEN+LLDS+F +KI DFGFAA+       +     G+  YMAPEV             GYD  K+DVWS  VILF M  GHPP   A   DWWF A++  R D FW SH    P      + LI +ML V+P  R  +  ++ +P+   +P
Sbjct:   27 DLFHFVSHSGSFSEVSSKIVFKQILEGMQACHDAGVIHRDLKPENILLDSNFNVKITDFGFAAIQDPSASTKLYTDCGTAFYMAPEVF---------PKLGYDGKKSDVWSLAVILFIMTTGHPPFTTATPRDWWFNAIQEGRYDRFWSSHLKCMPNFSGSLQRLISSMLVVEPTARPTIADVLANPWFSLSP 210
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0CC42_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CC42_PARTE)

HSP 1 Score: 162 bits (410), Expect = 9.660e-41
Identity = 94/266 (35.34%), Postives = 148/266 (55.64%), Query Frame = 1 
Query:    4 GEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSH---QNTAPPL-PEDAKHLIQAMLTVDPAHRINVDQIMNHPYV 789
            GE    KV  K+   +    +    L +E+  +++  +H + V+LI       Y R+NG+      ++LEL E GELFE ++  G F P   + YF+QL+  + +     +CHRDLK EN+LLD +F LK+ADFGFA +  E    R+I+G+  YMAPE++      A  D   Y+  KAD++S+GVI F + AG PP   A++ D +F+ +  ++ + FW  H   +   P   P++ +HL+  ML  +P  R  ++Q M HP+V
Sbjct:   33 GEHDGKKVAIKIFKSNHGTAQNIKTLTNEINILKQL-NHPNLVNLIEFNSALPYRRKNGQTEPRVCIILELAEGGELFEYVASSGRFSPETSRFYFKQLLSAMSYMASKDICHRDLKLENVLLDDNFNLKVADFGFAKV-METAKIRTILGTPGYMAPEIV------AKKD---YNGTKADIFSAGVIFFIIHAGSPPFSTASDKDQYFKLILCNKWEQFWTYHLKYKGGNPEFFPQEFRHLMMGMLAPNPDQRFTLEQCMQHPWV 287
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Match: A0A422PZ50_9TRYP (Serine/threonine protein kinase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A422PZ50_9TRYP)

HSP 1 Score: 155 bits (392), Expect = 5.940e-40
Identity = 97/266 (36.47%), Postives = 140/266 (52.63%), Query Frame = 1 
Query:    4 GEMVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDTTYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCGVKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHM-----MCRSIVGSRTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKANESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRINVDQIMNHPY 786
            G+  A+K++DK         R   +L  E+  M+    H+  +  +  +  TT         N   LVLEL   GELF+ ++    F     + YF QL+ G+ +CH  G+ HRDLKPENLLLD++ TLKI+DFG + L R +      M +++ G+  Y+APEVL          + GYD +KADVWS GV+LF MLAG+ P +  N +  +    K+ R +     H         DA+ LI  ML VDP  R+ V++IM HP+
Sbjct:   33 GKEWAIKIIDK---EQLVRERMEEQLKREIAVMKML--HQPNIIELREVMQTT---------NHIYLVLELVTGGELFDRIAAAKRFDEPTARRYFHQLISGIHYCHAQGIAHRDLKPENLLLDANDTLKISDFGLSNLNRGNASGRGTMLQTVCGTPNYVAPEVLK---------ERGYDGVKADVWSCGVVLFVMLAGYLPFDDENVNALF---TKIERGEYRMARH------FSPDARDLISKMLAVDPNKRVTVEEIMQHPW 266
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1953.6288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU86_ECTSI0.000e+092.48Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KK56_9PHAE2.520e-29593.26Protein kinase domain-containing protein (Fragment... [more]
A0A6A7G7B6_9CRUS4.090e-5642.75CBL-interacting serine/threonine-protein kinase n=... [more]
A0A7S2VUU2_9EUKA2.870e-5341.60Hypothetical protein n=1 Tax=Norrisiella sphaerica... [more]
A0A4D9CWE3_9STRA2.000e-4938.22Protein kinase domain-containing protein n=2 Tax=M... [more]
W2L4W4_PHYPR3.050e-4940.60CAMK protein kinase, variant n=10 Tax=Phytophthora... [more]
A0A6V3TQB6_9EUKA1.700e-4537.74Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S2Y0A9_9STRA7.620e-4241.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0CC42_PARTE9.660e-4135.34Uncharacterized protein n=1 Tax=Paramecium tetraur... [more]
A0A422PZ50_9TRYP5.940e-4036.47Serine/threonine protein kinase n=1 Tax=Trypanosom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1953contigEcto-sp13_S_contig1953:7136..15054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score899.4
Seed ortholog evalue7.4e-259
Seed eggNOG ortholog2880.D7FU86
Model size1512
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0588@1,KOG0588@2759
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-25_003130.1
Cds size1503
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1953.6288.1prot_Ecto-sp13_S_contig1953.6288.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1953 7136..15045 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462989.785234-CDS-Ecto-sp13_S_contig1953:7135..72471681462989.785234-CDS-Ecto-sp13_S_contig1953:7135..7247Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 7136..7247 -
1681462989.799026-CDS-Ecto-sp13_S_contig1953:7525..77491681462989.799026-CDS-Ecto-sp13_S_contig1953:7525..7749Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 7526..7749 -
1681462989.816061-CDS-Ecto-sp13_S_contig1953:8255..85761681462989.816061-CDS-Ecto-sp13_S_contig1953:8255..8576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 8256..8576 -
1681462989.826243-CDS-Ecto-sp13_S_contig1953:9174..92771681462989.826243-CDS-Ecto-sp13_S_contig1953:9174..9277Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 9175..9277 -
1681462989.8366005-CDS-Ecto-sp13_S_contig1953:9802..99121681462989.8366005-CDS-Ecto-sp13_S_contig1953:9802..9912Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 9803..9912 -
1681462989.8473814-CDS-Ecto-sp13_S_contig1953:10471..105731681462989.8473814-CDS-Ecto-sp13_S_contig1953:10471..10573Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 10472..10573 -
1681462989.8573518-CDS-Ecto-sp13_S_contig1953:11311..114581681462989.8573518-CDS-Ecto-sp13_S_contig1953:11311..11458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 11312..11458 -
1681462989.8679428-CDS-Ecto-sp13_S_contig1953:12018..120861681462989.8679428-CDS-Ecto-sp13_S_contig1953:12018..12086Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 12019..12086 -
1681462989.8760862-CDS-Ecto-sp13_S_contig1953:12786..129221681462989.8760862-CDS-Ecto-sp13_S_contig1953:12786..12922Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 12787..12922 -
1681462989.8909342-CDS-Ecto-sp13_S_contig1953:13719..138181681462989.8909342-CDS-Ecto-sp13_S_contig1953:13719..13818Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 13720..13818 -
1681462989.908791-CDS-Ecto-sp13_S_contig1953:14964..150451681462989.908791-CDS-Ecto-sp13_S_contig1953:14964..15045Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1953 14965..15045 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462989.9287763-UTR-Ecto-sp13_S_contig1953:15045..150541681462989.9287763-UTR-Ecto-sp13_S_contig1953:15045..15054Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1953 15046..15054 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1953.6288.1

>prot_Ecto-sp13_S_contig1953.6288.1 ID=prot_Ecto-sp13_S_contig1953.6288.1|Name=mRNA_Ecto-sp13_S_contig1953.6288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=501bp
MVALKVMDKLDPRDPSYPRRSSRLNDEVLAMQRCGSHEHTVSLISAMFDT
TYPRRNGELTNAPILVLELCEKGELFELLSQPGGFPPIVCKEYFRQLMCG
VKFCHDNGVCHRDLKPENLLLDSDFTLKIADFGFAALGREHMMCRSIVGS
RTYMAPEVLNLGQSYAYGDDAGYDAIKADVWSSGVILFTMLAGHPPMEKA
NESDWWFRALKLSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVDPAHRIN
VDQIMNHPYVVAAPRGPFWKGRPEDPRAVLREKMQELYEQSMASKRLCTV
ASSSRGTADSAGPEGSGSPSAGSGAPGRRGYVENPHDRSTWRGPGDDPFE
VPTMLEEDAAKVTGGFMATGDLKNLVKAVEQALFELGAEENGLRTFRQTA
KVSAVIPEDPKLGSGRVGVVAKVFRVVSRREVEGSAGGGGGSATTTDADC
FVVVLRRKRGDYYRYRKVEELLVARLTTKDMSVKDSDVMEQSGVSMSPIP
*
back to top

mRNA from alignment at Ecto-sp13_S_contig1953:7136..15054-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1953.6288.1 ID=mRNA_Ecto-sp13_S_contig1953.6288.1|Name=mRNA_Ecto-sp13_S_contig1953.6288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7919bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1953:7136..15054- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGGGCGAGATGGTGGCCCTCAAGGTCATGGACAAGCTCGACCCCCGCGA
CCCGAGCTACCCCCGTAGGTCCAGCAGGCTCAACGATGAGGTAAGCGTGT
GCACCTCCGCGTGTCGTCGGAGTGGACGATGGTGGGGAGATACCATGGGA
AGTTCAGTACACCGCCGCGCATGGGCCGGGCGAGCCGGCCCTTTCCACTC
ACTCGGCAGTGGACGATGGTGGAAAATATCGTGGAAAAAGTACCGTATAA
ATGGCCGCGCATGGGCCGGGCAGGCCGACGCTTCCCACTCAGTGGGCTCC
AGGCAGATGTATACCACGTATGTAATGTTGTAGCAGAGAGTGTGCTTTAG
TTTGTTCTTGATTCACGTCGACTCGTGAACGTTGGGAAGAAATCTGCGCA
TCACGTTTCGTTTTTTTTTATTTTCAGAACGAGCGCGCCACCAGTGTAAA
GAGCACCTGAGAGTGAGGGAGCTAAGAAATTGCAGACTTAAGAAATGATC
GACACTCCATGCGAACCTGGCCCATGACAGTGTAAGAACAGGCGGTTAGT
TGAAGAATCCTGCGCTTGTTGTTGTCCTCACATACCGGTCTCCGCTCAAA
TGTCCGTACCTACCGTCCAACTTGACGGGGACGGCTTCCGTGGTCACAAG
CCAACTACACTTAAAACGTATATTAAGCGCCGTTGGATTGCCGTTACCCC
ACCGACGGGGAAGAACCGACCCTTTTCTTTTCGGTGTTTTCGACGAAGTT
CGTGTTTGTGCGTTGATTTTGTCGCCACCGTGCTCGTCCTCAAGGCGTTA
TGGTCGACACTCGTGGATGTTGTTGTTGTCGACACCCGTTGTTGTTGCTG
TTGTTGCTGTTGTTGCTGTTGCTGTTGGTGTTGTCGTTGGTGTTGTTGTT
GTCTTCACAAAAAAAGAAAAGTTTCGATCTCTCCACCCAGTGCCTTCATT
TGTCCCCCTGATCGACCTTGACCGAGCGTTGAGCTGCGATGATTTTCATA
CGTTTCATACCGCACGCCCCTTAAACTAGGAAACCCGCTCCCGCCCCGCT
CGAGGTTGCACCGCTGAAACGAAACCGGCTCTCCACGTTTTGATTTTCCT
TTTTTTTTGTTAGAACACGGTACAAAAAATGACAGAAAATACTTGCCGTT
CAAGATGCCTACAGCAGTGCAGCATAACCACGTTTTTTTTTGTTCCTACT
TTGCTCCTCTTGTGTTTGTTGACGCTTCGTTCGCAGGTCCTTGCGATGCA
GAGATGTGGGTCCCACGAGCACACAGTGTCGCTGATCAGCGCTATGTTCG
ACACGACTTACCCCAGGCGGAACGGCGAACTTACGGTGATTCTTTCTTTT
TCATGTACTTGTTTTTGATTTGTTTTACTTACTTTTTTTTTTTGGTTCCC
AGAAATACAAGTTGGTCACCCTTCAAAACGATAAATCCATTGGTAATCTA
CCACAGACTCTCATCTGCGGAGGAGACGGATTTCTGGTATTCTTTGAAAA
TTCAAACAACGAAACAAACAAGGGAGGTCCTCGCTACACACGTGGTACCA
CGTGCTTGATTAGCGGACTGTTGGTGGTAGACCGACATTTCATGTTGTTG
TGACAGACAACGGCTCTGATTTTGGTGTTTTGCTGGTGGCACGTTATTTT
TTAGAAGGATGTCCTGCGCGTAGTAAATGTTCGTGTGGGCCAAAGCTCCT
TGGTCTACGTACGTCAAATCTCCTCCGATCTACGTTACTTGCCATAGAAG
GACGGCATAGAACGAACGACCAAATCAAGAGACAGAAGCAGAGCTACCTA
CTCGGTCGGGTCGTCTTTGCGTGGTCTTCTTTTTTTGTCCCGACGAGCCT
TGGATATACGTGAAGCCTCTTCCATCTACGATCTACGTTACTTGCCACAG
AACGACGGCATAGAACGAACAACCAACCATGAGAAAGAAGCGGGGGGATT
TAGTTTCGTCCCGGTCCTGGTGCGTGGTCTTTTTCGTTTGTCCCGATGAG
CTTTTTCAACGAATACTTTTCTTTGTCTTCTTCCCCCCACCCCCCTCCCC
TCGTGGTCAATGGTCTAACTGCTAAGGCATGCAAAACATGAGTGTACCCC
CCCTCGCCCCCCCGCCCCTCGTTTTGTGGCAGAATGCACCCATCCTGGTG
CTAGAGCTGTGCGAGAAGGGGGAGCTGTTCGAGTTGCTGTCTCAGCCGGG
CGGCTTCCCCCCTATAGTGTGCAAGGAGTACTTCAGGCAGCTCATGTGTG
GCGTCAAATTCTGCCACGGTACGTGTGTGCCACTCAGTGATCTTGTGTTT
CGTGTGTTTTCTTGGTTAGCATCGACCGCGCTAACCGGCTGACCAATCAA
AAAGACGCCAGTCTTTTATCGCGGGATAGAGCAGGGGAACCCGCAAGAGG
GTTCTGCCGACAGCGGGAGGCGCAGGAGTTGGACGACGGACGACAGCAGT
AGTGTCGTGGTAGTTAAGTAAACGAAATACCCAAATCTACCATGCAGCAT
TGCTGTTGCTCTCTCTGTCTGTTTTTTGTGCATGCTGCTCTTGATTCTAC
GGCTCTGTACCAACGAGTAGGTAGTTATGTTTTTGTCACTTTTTCACGCC
GGAGACGCCTTGCCTACGTCATCGCCAGGACTCCCGTTGATTGCCCGCTG
CTGCCGTCATCGATGTCGTTTGTCACCAGTGGTTATGGCGGTTGTTGTTG
TTACCTAACCCTAGCCATAAGTGATTGTGCGTCATCTTGTGTTGTTGTGG
TTGTTGCTGCTGCTGCTGTTGCCGTTGTTGTTGTTTTTGCCGTGATCGCG
CAACGCCATCGTTGTTTTGAAGCGATATTCTCCCAGCCCACACATCTTCA
TCTTCGCAGCTCTTTCTTGCAGCTGCCCCGCATTCTCTACATAGCTAGGA
GTCTTGAGCATGGGTCCGGGATCGACCACCCTAACCTACACTCTCTGACC
CGTTTCTTGTACCCACAGATAATGGCGTCTGTCACCGCGACCTGAAGCCG
GAGAACCTGCTTTTGGACTCTGATTTCACTCTCAAGGTGGGCGAGAGCAA
CAGAGGAGTTGTTGTGGTTGGCGATGCGGAGGGCTGATCACACGGGCCGC
CTTCGCGAGAAAATTAAGTTTTATGAGAAATTAAAAACAGCGCGGGGGGA
CGCAGACCCTCTCCCCAACCCAACCTCTACGATTGCCTGCTTTCACTACA
TTTTGGTACCGCTTGGGAGAAAAACCCTTTGAAGGCTACTGGGAATTTCT
ATCACACCGAGTATGGTTGGTGTCGATCGGTGTGTTATTTCCTCGACCCT
CTTTGTCTCCCGTGTCTCTCGCCTTTTTCTCCGTCGCCTCGTGCTTTTCC
TCTCTCGTCTTCCTTGTTTGATTCCTTCCGGAACGACATTCGATCCCCCA
GACTTGCCTAATGCATAACCCCGCTCTCCTGTACATCGCCCATCTGTTGA
CACAACCCCCTTGCCTCCTTTCTCTCTCCCTCTCAATTTTTCTCTCTAAC
TCTCTCTCTCTTGTCCATGCTCCAACACATTTGTACTCTATCTTCTCTTT
CATGCGCACGCTGTATCCACGTTCTGTTTGCCTGCTGTAAGCGCAGATTG
CTGATTTCGGGTTCGCAGCCTTGGGGCGGGAGCACATGATGTGCCGCAGC
ATCGTGGGATCGAGGACCTACATGGCCCCGGAGGTTCTCAACCTGGGGCA
GAGCTACGCCTACGGCGACGACGCGGGGTACGACGCAATTAAGGTGAGAG
CCAAGTTCAACTTGTCCTCTAAAAAAAAAGTATTGAAAAAAAACAACGAA
TTCGAAACTTTAAATTTGTTTTAAATCTGAAAGATTAAATCAACTGAAGA
GGCACATTTAACAAAATCTTCGTACACAGTATTCCTTTCTCTCACAGCGG
ACTAGACAATCAACAATGCTGCTCGTCCTCCAAAAACCTTAAAATATGCC
ACAAACCCAAAAATATGTTTCATTATATTATATTGAATGGGAGTATATGG
GAGGCAAGCCGCGTAACTCCCGAAGGGGCCGTAGGAGAACCTTGTATACA
ATAAATTGTGTTTTCTTTCACGGCGGGCTCGACAGCAATTACTTTTTGCT
CAAGTCAAGCGGGTACAAAAAACTTGTTCACTGAAAACACTTCAACCCAT
CCCCTTCGAATGTGGTTATATCTCGAACGATCAGTCTCCCTTTGACTGTA
TGTTAACATGTACTTTCAGTGCATAGGCTTACACAAATCAATTATAAAAC
AAGCCCAGTATTCAGTCGGGTTTTCCCCCCGCTCACTTTTTGAGTTTATG
TATATTTTCTCGTTTGTACATTTTCTACAACATCTCTCCCGGTGACACTT
GTCTTGTGTGTGTGTTTTTGTCATTAGCATCGACCGCGCTAACTAACCGG
TTGACCAATGAAAAGACGTCAGTTTCAGTGCGGTTGAAAACACAAACCAC
TTCTAAATGCACTTTTGTGTGTGTGCGTCAGGCGGACGTTTGGAGCTCGG
GCGTGATCCTGTTCACGATGCTGGCAGGCCACCCCCCGATGGAAAAGGCG
AACGAGTCAGACTGGTGGTTCCGGGCTCTCAAGGTGCAAAATCGCAGCGC
ATCCGAACTTGAGCCGTTATAGGAGATATGCAAAGGCGTGGAGCAATTTG
GCTTCCGTTTTTCCTGCCTTACTGGCAAGGGACGTTGATCCCGAGTATTT
TGTGCACAGGACAAGGGTCCAATTTCCCAGATTTGTGTATGGTTTGGAGG
GGGATATATACCGTAGGAGGGATGGGTAGGACGCCTCAGGGAGATGGACA
CCCTTCTGCGCGACCGCGGATTGGAGTTGCTACCTTGAACATATCCTGTG
TGTGACCGCCGATCCACAGTAAAAGGATGAGGTTAATTTAGTGGGCTGTT
TCTGGCAGAGCCACTACAACCACACCGGTGCGTCTCAACGACCAATTTAC
CCATCTCGTGCTGTTCTTGTTGAATCTTTTCTTCTCCGGTCTCATTTTTA
ACTTCATGTTTTCGCCGCTTTCTCTTTTTTTTGTTCCTTTTTTTCATGGT
ATTCTGCACTCCATCTTCGTTATGTTTTGAACGCATCTCGTCCTGCCACC
CCATCCTTTACGTTTCTGCCCCTTTTTTGTCGTACTTTTCAGCTCAGTCG
ACAGGACCTGTTCTGGCAAAGCCACCAGAACACAGCCCCCCCGTTACCCG
AAGACGCTAAGCACCTTATTCAGGCCATGCTCACGGTCGATCCCGCACAC
CGGTAAGTGCCGTCCTCTGAGAAATACTCATCACGTCTTCTTGGTCGTTG
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGATTATG
TTGGTGTTGTGCCATTGATGGTGGTTGTTGCTGTTGCTGTTGTTGTTGCC
AACGTCGTCTTGACATCCAAAACCGTTCCGATCTTTGGTAGGTACATCAT
TCAGCATCCGAACTCGTCCAACTGGCCCCGACCCCTTCCAAAGGCAAACT
ACCCAATAGACGCAAAGATAAATGCTTGAGATCGAACGAAAGTCGAAAGG
TCTGTTCTCGAAGTAGGATCGATCGATGGTCGACCACGTTGCCTTGAAAT
TTTTTGTCGCGCGATTTTAGCGTATTGTAGAAATGAAATGTGCGCCACCA
TGTTCACAATTTGTCTTGTTACCCTCTTAACTTGCCCTCCAGAAACTGGT
TTGTGCAAGTTTCAAGCAAGACATGAGCGTTTTGGCATAACGGAATGCCG
TTCCCCCCCCCCCTGCCTTGACTACAGAATCAATGTCGACCAGATAATGA
ATCACCCGTACGTGGTGGCCGCTCCGCGGGGTCCCTTCTGGAAAGGAAGG
CCTGAAGATCCCCGGGCAGTGCTCCGCGAGGTGAGAGAGTTATCGTAGGC
GACATGGCGTGAGATATCACACCCCTTGGACCGATTTCCAAAGCTCGATT
ACCGTACGCGACATGACACAAGAAACCACACCGCCTGGATCAATTTTCGA
AAATTGATTTCAGTGGACGCCATGACACAAGATACCACACCCCCCGGACC
GACTTCCAAAGCTCGATTGCTGCTCCACAGTAGAGAGAGGCGCGGAGTCG
AAAATGTCGGCATTCGAACCCCCGTCTCGTCGAGAGCTTTCCGAAGTTAA
TTTTTGTATTTCTCAAGGTCCTCAGCCAACAACTCCAGTCGAGTCAAGCA
GATGTAGACGACCTCGACTAGCCGCTGTTTCTCTTCGACGTGAGTCATGG
CCGATCGGTTCCTCCCTGCGAACGGCGAAAGAAGCGAGGGCAACGCCTGT
GCCGGTCACCAACGCTCGTTACGGTAACTTTACCACCATTTTCGTCCACG
GGCCCATGGAATGCCAACATCAACACCACTGGAAATTGTCCAAACAAGTT
CTTGGTACGTTCACCACCTAACCGATACCTCCTCCAAACAACGAACGTAC
CTACGCACGGCTGCCGCCCAACCAACAGAAAATGCAGGAGTTGTACGAGC
AGTCGATGGCGTCCAAGCGCCTATGCACCGTGGCCAGCAGCAGCAGGGGC
ACCGCAGATTCTGCCGGCCCCGAGGGCTCGGGGTCCCCGTCGGCTGGTTC
GGGGGCCCCGGGTCGGAGGGGGTACGTGGAAAACCCCCACGACCGCTCTA
CATGGAGGGGTCCCGGGGACGATCCGTTCGAGGTGCCTACCATGTTGGAG
GAGGATGCGGCCAAGGTAACTGGGGGCTTCATGGCGACCGGAGACTTGAA
GAACCTGGTGAAGGCGGTAGAGCAGGCTCTGTTCGAGCTGGGCGCCGAGG
TACGCTGGTGGTGGTGGTTTGCGTGAGAGCGTGCTGCTTAGATGATGAAA
CTCTAGGGGTGGGGACGGCAGGCTCTGTTTCGCCCTTGGGCGGTACGGCT
GTTTTCGGGTTGCGAACCGGTCGGGTGTGTTGTCCAGACGATCTCTAATA
GGGAAGGAATATTGTACGTATGTAGGAACAGCGTTGCCCTTCTAGAGGAA
AAAGGTTTGCATCCAACTGGGGAAATGATATGGATGGGAAGAAAACGCCT
CCGAAGCGATCAACGAGAGGCGAGGATTTTAGAGTTGATGTACGCCTTTG
AAATAGAGGAGGGGACTTCGTATCCCTATCCCTAACCCCCAACCCAAACC
CCATACCCCCTACTAAAATCAAGCTTAAATTCCTGGCGCAACCCAACCCG
GTACCCACCATACTAAGAGACCAAGCTTCGATTCCTTGCGAAGGCTACTA
TCAGCAACGAGCATCCCCTCCCCCCCCCCTCTATCAGATCGCCGGAGTAA
ACAAGGAAAACGGCCTGAGGACCTTCAGGCAGACGGCCAAGGTATCCGCC
GTCATCCCGGAGGACCCCAAGCTCGGAAGCGGGCGCGTGGGTGTGGTCGC
CAAGGTGTTCCGGGTCGTCTCGCGGCGGGAGGTCGAGGGCTCCGCAGGAG
GAGGGGGGGGGAGTGCGACGACGACCGACGCCGATTGCTTCGTGGTGGTT
CTCCGGAGAAAGCGGGGCGATTACTACCGGTGAGCAGGAAGGAAGGGAGG
AAGTACGTTGCTGTTGTGGTTGTCGTGTGGCAATGGCTGGTTGTTTTGGT
GCTGGTGTGTCGCTGTTGATGTGGCTGTGGAAAGTACCGGGGACGCGATG
TTGAGACAAGTTTGGGGGACAAGATGCCACAGCAGGACCACTTCCTTTCT
TCGACGCCCCTTTGTTTCTCACACACATCCTTCCGTTGTTCCCCGCTGGT
GTGCTTCTGCTGCCTCTTTCGGTGTCGTTCGTAACCGTCGTGTTTCATCC
GTCACAGCTACCGGAAGGTGGAGGAGTTGCTCGTGGCTCGCCTGACGACG
AAGGACATGAGCGTGAAAGACAGCGACGTGATGGAACAAAGCGGCGTCAG
CATGTCGCCCATACCATGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1953:7136..15054-

>mRNA_Ecto-sp13_S_contig1953.6288.1 ID=mRNA_Ecto-sp13_S_contig1953.6288.1|Name=mRNA_Ecto-sp13_S_contig1953.6288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1953:7136..15054- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGGCCCTCAAGGTCATGGACAAGCTCGACCCCCGCGACCCGAGCTA
CCCCCGTAGGTCCAGCAGGCTCAACGATGAGGTCCTTGCGATGCAGAGAT
GTGGGTCCCACGAGCACACAGTGTCGCTGATCAGCGCTATGTTCGACACG
ACTTACCCCAGGCGGAACGGCGAACTTACGAATGCACCCATCCTGGTGCT
AGAGCTGTGCGAGAAGGGGGAGCTGTTCGAGTTGCTGTCTCAGCCGGGCG
GCTTCCCCCCTATAGTGTGCAAGGAGTACTTCAGGCAGCTCATGTGTGGC
GTCAAATTCTGCCACGATAATGGCGTCTGTCACCGCGACCTGAAGCCGGA
GAACCTGCTTTTGGACTCTGATTTCACTCTCAAGATTGCTGATTTCGGGT
TCGCAGCCTTGGGGCGGGAGCACATGATGTGCCGCAGCATCGTGGGATCG
AGGACCTACATGGCCCCGGAGGTTCTCAACCTGGGGCAGAGCTACGCCTA
CGGCGACGACGCGGGGTACGACGCAATTAAGGCGGACGTTTGGAGCTCGG
GCGTGATCCTGTTCACGATGCTGGCAGGCCACCCCCCGATGGAAAAGGCG
AACGAGTCAGACTGGTGGTTCCGGGCTCTCAAGCTCAGTCGACAGGACCT
GTTCTGGCAAAGCCACCAGAACACAGCCCCCCCGTTACCCGAAGACGCTA
AGCACCTTATTCAGGCCATGCTCACGGTCGATCCCGCACACCGAATCAAT
GTCGACCAGATAATGAATCACCCGTACGTGGTGGCCGCTCCGCGGGGTCC
CTTCTGGAAAGGAAGGCCTGAAGATCCCCGGGCAGTGCTCCGCGAGAAAA
TGCAGGAGTTGTACGAGCAGTCGATGGCGTCCAAGCGCCTATGCACCGTG
GCCAGCAGCAGCAGGGGCACCGCAGATTCTGCCGGCCCCGAGGGCTCGGG
GTCCCCGTCGGCTGGTTCGGGGGCCCCGGGTCGGAGGGGGTACGTGGAAA
ACCCCCACGACCGCTCTACATGGAGGGGTCCCGGGGACGATCCGTTCGAG
GTGCCTACCATGTTGGAGGAGGATGCGGCCAAGGTAACTGGGGGCTTCAT
GGCGACCGGAGACTTGAAGAACCTGGTGAAGGCGGTAGAGCAGGCTCTGT
TCGAGCTGGGCGCCGAGGAAAACGGCCTGAGGACCTTCAGGCAGACGGCC
AAGGTATCCGCCGTCATCCCGGAGGACCCCAAGCTCGGAAGCGGGCGCGT
GGGTGTGGTCGCCAAGGTGTTCCGGGTCGTCTCGCGGCGGGAGGTCGAGG
GCTCCGCAGGAGGAGGGGGGGGGAGTGCGACGACGACCGACGCCGATTGC
TTCGTGGTGGTTCTCCGGAGAAAGCGGGGCGATTACTACCGCTACCGGAA
GGTGGAGGAGTTGCTCGTGGCTCGCCTGACGACGAAGGACATGAGCGTGA
AAGACAGCGACGTGATGGAACAAAGCGGCGTCAGCATGTCGCCCATACCA
TGA
back to top