prot_Ecto-sp13_S_contig1953.6287.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1953.6287.1
Unique Nameprot_Ecto-sp13_S_contig1953.6287.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length280
Homology
BLAST of mRNA_Ecto-sp13_S_contig1953.6287.1 vs. uniprot
Match: A0A6H5JRK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK9_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 1.500e-123
Identity = 246/279 (88.17%), Postives = 250/279 (89.61%), Query Frame = 0
Query:    1 MHRFWARLSGDSCRHEAGTRWGMGGGPAFGVSDGSPERSSGEIVSPEGSLVEAAAFEGHHGLVDALSHRRRVARWARLTGGSRAQERGRGSSDGHLTSAAXXXXXXXXXXXRGGRNNRRSRGNAAGCVVGATADRQVSPEPAVLATPSPPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVSQAERGFVPRGGGVAEDAGNGDEERGEERPSFAPGDTESMSPALPRARMLWRAFSEVDHNKIEDNHRRAAQRHLARFDPAPGVRNPPMCYGPI 279
            MHRFWAR SGDSC HEAG RWG GGG A GVSDG P+RSS E  SPEGSL EAAAFEGHHGLVDALSHRRRVARWARL G SRAQERGRGSSDGHLT AAXXXXXXXXXXX       RSRGNAAGCVVGATADRQVSPEPAVLATP+PPE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VSQAERGF+PRGGG+AEDAGNGD ERGEER SFAPGDTESMSP LPRARMLWRAFSEVDHNKIEDNHRRAAQRHLAR DPAPGVRNP MCYGPI
Sbjct:  442 MHRFWARFSGDSCSHEAGRRWGTGGGHASGVSDGPPQRSSRENDSPEGSLGEAAAFEGHHGLVDALSHRRRVARWARLAGRSRAQERGRGSSDGHLTFAAXXXXXXXXXXXXXXXXXSRSRGNAAGCVVGATADRQVSPEPAVLATPTPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-VSQAERGFLPRGGGIAEDAGNGDGERGEERGSFAPGDTESMSPGLPRARMLWRAFSEVDHNKIEDNHRRAAQRHLARLDPAPGVRNPSMCYGPI 719          
BLAST of mRNA_Ecto-sp13_S_contig1953.6287.1 vs. uniprot
Match: D7FU87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU87_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 1.640e-104
Identity = 224/278 (80.58%), Postives = 232/278 (83.45%), Query Frame = 0
Query:    2 HRFWARLSGDSCRHEAGTRWGMGGGPAFGVSDGSPERSSGEIVSPEGSLVEAAAFEGHHGLVDALSHRRRVARWARLTGGSRAQERGRGSSDGHLTSAAXXXXXXXXXXXRGGRNNRRSRGNAAGCVVGATADRQVSPEPAVLATPSPPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVSQAERGFVPRGGGVAEDAGNGDEERGEERPSFAPGDTESMSPALPRARMLWRAFSEVDHNKIEDNHRRAAQRHLARFDPAPGVRNPPMCYGPI 279
            HRFWAR SGDSCRHEAG RWG GGGPA GVS+GSPERSSGE                HHGL DALSHRRR A  ARL GGSRAQERGRG  DGHLTSA XXXXXXXXXXX       RSRGNAAGCVVGATAD+QVSPEPAVLATP+P   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAE+S+ ERG  PRGGGVAEDAGNGDEERGE+R SF PGDTES+ P LPRARMLWRAFSEVDHNKIEDNHRRAAQRHLARF PAPGVRNPPMCYGP+
Sbjct:  359 HRFWARSSGDSCRHEAGRRWGTGGGPASGVSNGSPERSSGEXXXXXXXXXXXXXXXXHHGLFDALSHRRREAHRARLAGGSRAQERGRGG-DGHLTSAXXXXXXXXXXXXXX-----RSRGNAAGCVVGATADQQVSPEPAVLATPAP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEISRVERGCPPRGGGVAEDAGNGDEERGEDRGSFPPGDTESIPPGLPRARMLWRAFSEVDHNKIEDNHRRAAQRHLARFGPAPGVRNPPMCYGPM 629          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1953.6287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRK9_9PHAE1.500e-12388.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU87_ECTSI1.640e-10480.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1953contigEcto-sp13_S_contig1953:1095..1934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1953.6287.1mRNA_Ecto-sp13_S_contig1953.6287.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1953 540..2376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1953.6287.1 ID=prot_Ecto-sp13_S_contig1953.6287.1|Name=mRNA_Ecto-sp13_S_contig1953.6287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp
MHRFWARLSGDSCRHEAGTRWGMGGGPAFGVSDGSPERSSGEIVSPEGSL
VEAAAFEGHHGLVDALSHRRRVARWARLTGGSRAQERGRGSSDGHLTSAA
AAAAAAAAEADRGGRNNRRSRGNAAGCVVGATADRQVSPEPAVLATPSPP
EAAAGSAPRSSITTTNDNEGGGDEVTAAGGGAAAEVSQAERGFVPRGGGV
AEDAGNGDEERGEERPSFAPGDTESMSPALPRARMLWRAFSEVDHNKIED
NHRRAAQRHLARFDPAPGVRNPPMCYGPI*
back to top