prot_Ecto-sp13_S_contig19526.6286.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19526.6286.1
Unique Nameprot_Ecto-sp13_S_contig19526.6286.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.440e-53
Identity = 107/177 (60.45%), Postives = 115/177 (64.97%), Query Frame = 0
Query:    1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRI---------------------------GDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEYYFSRPTTS-----------------SEGDEAVIRKMDKRFDDLTTTVTGG 133
            PWAALSYVIS++RFVLLEFPGLRWRG+LKCPQHGDPMLLD +  R                            GDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE+ FSRPT S                 S+    +IRKMD    D+ T V  G
Sbjct:  303 PWAALSYVISSVRFVLLEFPGLRWRGLLKCPQHGDPMLLDSEVYRRSHSGTLPVLKFPLEALNFEIYDRTILQGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEHIFSRPTLSVAVLCLSSRHVCTKQDPSQEQGELIRKMD----DVATAVEVG 475          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.380e-38
Identity = 79/135 (58.52%), Postives = 96/135 (71.11%), Query Frame = 0
Query:    1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEAVIRKMDK-------RFDDL 126
            PW ALSYV+SA+  +LL+FPGLR RG LKCPQHGD M L    TR GD++L E + CRQCSP  RG GAAAI L+RMVDIRL+RDV+F EVKARF  LE +Y FS  T SS  +  +++KM++        FDDL
Sbjct:  872 PWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKIL-EGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDL 1005          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.210e-37
Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 0
Query:    1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE--YYFSRPTTSSEGDEAVIRKMDK 121
            PW ALSYVISA+R +LL+FPGLR RG LKCPQHGD MLL  K T+ G +LL E +GC QCSP  RG GAAAI L+ MVDIRL+RDV+F +VK RF+E E  Y FS    SS  ++ +I+KM++
Sbjct:  772 PWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLL-EPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEE 893          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.080e-36
Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    2 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE--YYFSRPTTSSEGDEAVIRKMDKRFDDLTTTVTGG 133
            W ALSYV+SA+  +LL+FPGLRWRG LKCPQHGD +LL  K TR GD+ L  S  C+QCS   R  GAAAI L+RMV++RL+RDV+F EVK RF+E E  Y F  P  SS+ ++ +IRK+++    +T  V GG
Sbjct: 1109 WVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSR-CQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINE----VTIAVNGG 1237          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.720e-36
Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    2 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEAVIRKMDKRFDDLTTTVTGG 133
            W ALSYV+SA+R +L++FPGLRW+G LKCPQHGD ML    A R GD+LL E + C QCS    G GAAAI L+R VDIRL+RDV+F++VKARF  L+ +Y  S PT  S+ +  +IRK+D    D+ T V GG
Sbjct:  564 WVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLL-EGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKID----DVATAVKGG 692          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 6.010e-35
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 0
Query:    1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE--YYFSRPTTSSEGDEAVIRKMD 120
            PW ALSYV+SA+  ++ +FPGLR RG LKCPQHGD MLL  K  R GD+ L E + C QCS   RG GAAAI L+RMVDIRL+RD +F EVK RF++ E  Y FS P  SS+G+  +I+K+D
Sbjct:  800 PWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFL-EGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKID 920          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.030e-34
Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    2 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEAVIRKMD 120
            W ALSYV+SA++ +L++FPGLRW+G LKCP+HGD ML   KA R GD+LL E + C QCS    G GAAAI L+R VDIRL+RDV+F EVKARF  L+ +Y  S PT  S+ +  +IRK+D
Sbjct:  425 WVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFVDKARRGGDKLL-EGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKID 544          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 2.080e-34
Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE-YYFSRPTTSSEGDEAVIRKMD 120
            PW ALSYV+SA+  +L++FPGLRW+G LKCPQHG+ M    K  R GD+ L     C +CSP+ RG GAAAI L+ +VDIRL+RDV+F EVKARF+  E  YFS PT SS+ ++ ++RK++
Sbjct:  942 PWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLERK--CPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQYFSCPTGSSKTEDELLRKIE 1060          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.840e-34
Identity = 71/123 (57.72%), Postives = 89/123 (72.36%), Query Frame = 0
Query:    1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEA-VIRKMD 120
            PW A SYV+SA+  +L++FPGL W+G L+CPQHGD ML   KATR GD+ L E + C QCS    G GAAAI LLR VDIRL+RDV+F+EVKARF  LE +Y F+ PT     +E+ +IRK+D
Sbjct:  876 PWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFL-EGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKID 997          
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 8.170e-31
Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 0
Query:    2 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEA-VIRKMD 120
            W ALSYV+SA+R +L++FPGLRW+G LKCPQHGD M     A   GD+LL E + C  CS    G G AAI L+R+VDIRL RDV+F+ VKARF  LE +Y F+ PT     +E  +IRK+D
Sbjct:  391 WVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMPFVNMARSDGDKLL-EGSRCPHCSEDTGGLGEAAIDLVRLVDIRLNRDVIFNGVKARFDDLESQYSFTLPTHDRSKEEGELIRKID 511          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYD1_9PHAE1.440e-5360.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUD0_ECTSI1.380e-3858.52LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI1.210e-3760.98LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LCS7_ECTSI1.080e-3655.22LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K1K4_9PHAE6.720e-3655.97Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FUC3_ECTSI6.010e-3558.20LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K516_9PHAE1.030e-3457.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI2.080e-3455.37LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI2.840e-3457.72LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L0H4_9PHAE8.170e-3154.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19526contigEcto-sp13_S_contig19526:12..2061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19526.6286.1mRNA_Ecto-sp13_S_contig19526.6286.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19526 10..2061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19526.6286.1 ID=prot_Ecto-sp13_S_contig19526.6286.1|Name=mRNA_Ecto-sp13_S_contig19526.6286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQL
LLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEY
YFSRPTTSSEGDEAVIRKMDKRFDDLTTTVTGG
back to top