mRNA_Ecto-sp13_S_contig19526.6286.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE) HSP 1 Score: 188 bits (478), Expect = 1.440e-53 Identity = 107/177 (60.45%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRI---------------------------GDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEYYFSRPTTS-----------------SEGDEAVIRKMDKRFDDLTTTVTGG 399
PWAALSYVIS++RFVLLEFPGLRWRG+LKCPQHGDPMLLD + R GDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE+ FSRPT S S+ +IRKMD D+ T V G
Sbjct: 303 PWAALSYVISSVRFVLLEFPGLRWRGLLKCPQHGDPMLLDSEVYRRSHSGTLPVLKFPLEALNFEIYDRTILQGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEHIFSRPTLSVAVLCLSSRHVCTKQDPSQEQGELIRKMD----DVATAVEVG 475
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.380e-38 Identity = 79/135 (58.52%), Postives = 96/135 (71.11%), Query Frame = 1
Query: 1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEAVIRKMDK-------RFDDL 378
PW ALSYV+SA+ +LL+FPGLR RG LKCPQHGD M L TR GD++L E + CRQCSP RG GAAAI L+RMVDIRL+RDV+F EVKARF LE +Y FS T SS + +++KM++ FDDL
Sbjct: 872 PWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKIL-EGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDL 1005
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.210e-37 Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE--YYFSRPTTSSEGDEAVIRKMDK 363
PW ALSYVISA+R +LL+FPGLR RG LKCPQHGD MLL K T+ G +LL E +GC QCSP RG GAAAI L+ MVDIRL+RDV+F +VK RF+E E Y FS SS ++ +I+KM++
Sbjct: 772 PWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLL-EPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEE 893
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.080e-36 Identity = 74/134 (55.22%), Postives = 95/134 (70.90%), Query Frame = 1
Query: 4 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE--YYFSRPTTSSEGDEAVIRKMDKRFDDLTTTVTGG 399
W ALSYV+SA+ +LL+FPGLRWRG LKCPQHGD +LL K TR GD+ L S C+QCS R GAAAI L+RMV++RL+RDV+F EVK RF+E E Y F P SS+ ++ +IRK+++ +T V GG
Sbjct: 1109 WVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSR-CQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINE----VTIAVNGG 1237
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 140 bits (352), Expect = 6.720e-36 Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 1
Query: 4 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEAVIRKMDKRFDDLTTTVTGG 399
W ALSYV+SA+R +L++FPGLRW+G LKCPQHGD ML A R GD+LL E + C QCS G GAAAI L+R VDIRL+RDV+F++VKARF L+ +Y S PT S+ + +IRK+D D+ T V GG
Sbjct: 564 WVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLL-EGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKID----DVATAVKGG 692
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 137 bits (345), Expect = 6.010e-35 Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE--YYFSRPTTSSEGDEAVIRKMD 360
PW ALSYV+SA+ ++ +FPGLR RG LKCPQHGD MLL K R GD+ L E + C QCS RG GAAAI L+RMVDIRL+RD +F EVK RF++ E Y FS P SS+G+ +I+K+D
Sbjct: 800 PWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFL-EGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKID 920
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.030e-34 Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 4 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEAVIRKMD 360
W ALSYV+SA++ +L++FPGLRW+G LKCP+HGD ML KA R GD+LL E + C QCS G GAAAI L+R VDIRL+RDV+F EVKARF L+ +Y S PT S+ + +IRK+D
Sbjct: 425 WVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFVDKARRGGDKLL-EGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKID 544
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 135 bits (341), Expect = 2.080e-34 Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECE-YYFSRPTTSSEGDEAVIRKMD 360
PW ALSYV+SA+ +L++FPGLRW+G LKCPQHG+ M K R GD+ L C +CSP+ RG GAAAI L+ +VDIRL+RDV+F EVKARF+ E YFS PT SS+ ++ ++RK++
Sbjct: 942 PWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLERK--CPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQYFSCPTGSSKTEDELLRKIE 1060
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 135 bits (340), Expect = 2.840e-34 Identity = 71/123 (57.72%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 1 PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEA-VIRKMD 360
PW A SYV+SA+ +L++FPGL W+G L+CPQHGD ML KATR GD+ L E + C QCS G GAAAI LLR VDIRL+RDV+F+EVKARF LE +Y F+ PT +E+ +IRK+D
Sbjct: 876 PWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFL-EGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKID 997
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE) HSP 1 Score: 125 bits (314), Expect = 8.170e-31 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 4 WAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARF--LECEYYFSRPTTSSEGDEA-VIRKMD 360
W ALSYV+SA+R +L++FPGLRW+G LKCPQHGD M A GD+LL E + C CS G G AAI L+R+VDIRL RDV+F+ VKARF LE +Y F+ PT +E +IRK+D
Sbjct: 391 WVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMPFVNMARSDGDKLL-EGSRCPHCSEDTGGLGEAAIDLVRLVDIRLNRDVIFNGVKARFDDLESQYSFTLPTHDRSKEEGELIRKID 511 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19526.6286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19526.6286.1 >prot_Ecto-sp13_S_contig19526.6286.1 ID=prot_Ecto-sp13_S_contig19526.6286.1|Name=mRNA_Ecto-sp13_S_contig19526.6286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp PWAALSYVISAMRFVLLEFPGLRWRGILKCPQHGDPMLLDRKATRIGDQLback to top mRNA from alignment at Ecto-sp13_S_contig19526:10..2061- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19526.6286.1 ID=mRNA_Ecto-sp13_S_contig19526.6286.1|Name=mRNA_Ecto-sp13_S_contig19526.6286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2052bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19526:10..2061- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19526:10..2061- >mRNA_Ecto-sp13_S_contig19526.6286.1 ID=mRNA_Ecto-sp13_S_contig19526.6286.1|Name=mRNA_Ecto-sp13_S_contig19526.6286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19526:10..2061- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |