mRNA_Ecto-sp13_S_contig1950.6274.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: D8LIE1_ECTSI (Rhodanese Homology Domain superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE1_ECTSI) HSP 1 Score: 821 bits (2121), Expect = 7.520e-293 Identity = 418/437 (95.65%), Postives = 426/437 (97.48%), Query Frame = 1
Query: 1 MLSMACCAALGSVSLSLLLLKATAFVPGPSLPAQQRAPLPYRGQAAAAYSIKDELRCCGREKGTRRRRSRRSPELFRLGAGGGNNPPLEVLRNDNARVRRNLERIRQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPLGDFPVALYVKTSLGKDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
M+SMACCAA+ SVSLSLLLLKATAFVPGPSLP +QRAPLPYRGQAAAA SIKDELRCCGREKGTRRRRSRRSPEL RLGAGGGN+PPLEVLRNDNARVRRNLERIRQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPA GSLETLRRMLKETFPLGDFPVALYVKTSLG+DAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSA EWEMLSFYRFVDIDQPEAFANMLQ LAWAPLGVRGRVYVA EGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSG+VGKELSPEEWH+MMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVK+ L
Sbjct: 1 MVSMACCAAVSSVSLSLLLLKATAFVPGPSLPTRQRAPLPYRGQAAAASSIKDELRCCGREKGTRRRRSRRSPELSRLGAGGGNSPPLEVLRNDNARVRRNLERIRQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPAGGSLETLRRMLKETFPLGDFPVALYVKTSLGEDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSAPEWEMLSFYRFVDIDQPEAFANMLQ-LAWAPLGVRGRVYVATEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGKVGKELSPEEWHQMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKIAAYL 436
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A6H5L4H6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H6_9PHAE) HSP 1 Score: 775 bits (2002), Expect = 1.460e-274 Identity = 409/481 (85.03%), Postives = 420/481 (87.32%), Query Frame = 1
Query: 1 MLSMACCAALGSVSLSLLLLKATAFVPGP--SLPAQQRAPLPYRGQAAAAYSIKDELRCCGREKGTRRRRSRRSPELFRLGAGGGNNPPLEV------------------------------------------LRNDNARVRRNLERIRQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPLGDFPVALYVKTSLGKDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
M+SMAC AA+ SVSLSLLLLKATAFVPGP SLP +QRAPLPYRG AAA+YSIKDEL CC EKGTRRRRS RSPEL RLGAGGGN+PPLEV LRNDNARVRRNLERI QVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPA GSLETLRRMLKETFPLGDFPVALYVKTSLG+DAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSA EWEMLSFYRFVDIDQPEAFANMLQ LAWAPLGVRGRVYVA EGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSG+EFRESPPFPALHVRAR+QIVADGLARPLEWSDRSG++GKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVK+ L
Sbjct: 1 MVSMACGAAVSSVSLSLLLLKATAFVPGPGPSLPTRQRAPLPYRGPAAASYSIKDELWCCSWEKGTRRRRSCRSPELSRLGAGGGNSPPLEVVVDSEHLQHCRSRDVEGEAPDDLPDRARLRVRTRSVPTNWQVLRNDNARVRRNLERIHQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPAGGSLETLRRMLKETFPLGDFPVALYVKTSLGEDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSAPEWEMLSFYRFVDIDQPEAFANMLQ-LAWAPLGVRGRVYVATEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGNEFRESPPFPALHVRARRQIVADGLARPLEWSDRSGKIGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKIAAYL 480
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A835YRN1_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRN1_9STRA) HSP 1 Score: 313 bits (803), Expect = 2.220e-96 Identity = 176/356 (49.44%), Postives = 218/356 (61.24%), Query Frame = 1
Query: 298 RNLERIRQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPLGDFPVALY-------------VKTSLGKDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGD--EFRESPPFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMM---DKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
RNL ++ + IR S LR +LRLSG +KR R+FLPRD E + ++E FP+GD PV L+ V+T L K R +T L + AWA+ GLDLNV+L++ P Y + + P WLV++PD + EW+M+SFYRFVD+ P AFA +L L W PLG RGRVYVA+EGVNAQMAVP ERFE A +V +LAGVYLNK R S D + E+ PF ALHVR R QIVADGLA PL+W R+G LSP EWH + G +LDCRN YE+ VG F+ A PL T+FFR+SW L + D DAPI+TYCTGGIRCVKV L
Sbjct: 9 RNLAVFEALKNSELSPIRVFASPELRSRLRLSGNEKRQRIFLPRDTRQDP-EVIMAAVREAFPVGDLPVELWAYAAPSEQQPTPDVRTELPK---RVPVTDTNQLAASFAWADAAGLDLNVYLELDPAYRDPDPPAWLVNLPDVSAPREWQMISFYRFVDVPDPAAFAALLTAL-WRPLGARGRVYVAREGVNAQMAVPVDVVERFEVATASVARLAGVYLNKDSVRRSADVEDGDEAMPFDALHVRVRDQIVADGLATPLDWRT---RIGAALSPAEWHARVAGPGAAPGTVVLDCRNDYETDVGAFEAARPLGTAFFRQSWDALRDALVDVPTDAPILTYCTGGIRCVKVAAYL 356
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A4D9D2K2_9STRA (Rhodanese domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2K2_9STRA) HSP 1 Score: 231 bits (589), Expect = 3.610e-64 Identity = 138/350 (39.43%), Postives = 196/350 (56.00%), Query Frame = 1
Query: 346 IRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPLGDFPVALYVKTSL----------------GKD-----AQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFV--DIDQPEAFANMLQQL--AWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADG---LARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
+R + LR LRL+ R+K+ R+F+P + + SL + ++FP+ P + V+ G+D A L SDE L A+A A+ +G+ L V++ P +L D+PDP ++ +M+SFYRF ++ EA + ++L W P G GRVYVA EG+NAQMAVP T F RA ++E+L GVYLN+ +R ++ + P F ALH+R R+Q+VADG R +W D G+ + PEEWHE +D + +LDCRN +ES VG F A PL+TSFFRESW L+ + D +D PI+TYCTGGIRC+KVG L
Sbjct: 69 VRVLVDVDLRQTLRLTRREKKARLFIPLE-STASLSLFLDQIYQSFPVEGMPHNIVVRVRRKEGSGAVGEEDGEHGPGRDHADTGALHVTLKSDEDLARALAEAQKEGMSLQVYIRTDKSAAAAMVPTYLRDMPDPRASPSMQMVSFYRFFAPPLESEEALDLLAKKLRAVWEPFGALGRVYVASEGINAQMAVPATVFPHFARACASLEELTGVYLNR-DREVDMGQYAQEPAFDALHIRIREQVVADGGLSAEREFDWGD----CGRGMHPEEWHEKVD-DSNVLVLDCRNEFESEVGRFVTAEPLNTSFFRESWDVLKTRLADVPKDKPILTYCTGGIRCIKVGAYL 411
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A7S1XXX2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXX2_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.470e-61 Identity = 140/364 (38.46%), Postives = 191/364 (52.47%), Query Frame = 1
Query: 319 QVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPLGDFPVALYVKTS-----------------LGKDAQRSML----------------TSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
++ R + K +R T ALR R++ R +RG+VFLP D G + LR ++E L D P + T+ G++ R + +D L A AEG + + + + + P +P+P +W +LSFY F I+ PE A L++L WAP G GRVYVA EG+NAQM V F + L VY N + + +E E+P F ALHVR R +IVADGL R L+W+ + G+E+ PEEWH+++ EE LLDCRNSYE+ VG FD A PL+T+FFRESWG L+ + D +DAP+MTYCTGGIRCVKV L
Sbjct: 59 RLARGEIKPVRIFTLGALREFQRVASRKRRGKVFLPVDET-GEVGALRDEVRELLGLKDIPFEMRELTTELREKMLSGWEPNAVLAAGEEVNRETIMGMREEFEVDLAEVATAADLERLWTEAEAEGDAVCIGITAEAEALPFRDPTPALYPGMPEP--GGDWTVLSFYSFEPIEDPEEAAAELRRL-WAPTGATGRVYVANEGINAQMTVASNVMSYFMEGTRLLPALRSVYFN-VDHEFDPEECDEAP-FRALHVRVRDKIVADGLDRELDWN----KGGREVPPEEWHDLVKGEETPILLDCRNSYETEVGRFDGAEPLNTTFFRESWGILKDRLKDVPKDAPVMTYCTGGIRCVKVNAWL 412
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A0G4GLG9_VITBC (Rhodanese domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLG9_VITBC) HSP 1 Score: 205 bits (522), Expect = 1.230e-55 Identity = 118/268 (44.03%), Postives = 147/268 (54.85%), Query Frame = 1
Query: 661 PEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLN--------------KAERRW---------------------------SGDEFRESP----------PFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
PEWLVD PDP + ++SFYRF I+ P+ A ++L W PL GRVYVA EGVNAQMAVP F RA + L GV LN + RW SG++ SP PF LH+R RKQIVADGL RPL+W +GR E+SPEEWHE +++ + +LDCRN+YE+ VG FD A+PL+T++FRESW L + D D++APIM YCTGGIRCVK G L
Sbjct: 61 PEWLVDCPDPTESPTMTLVSFYRFTPIEDPQLMAESFRKL-WEPLKALGRVYVASEGVNAQMAVPTNVLSAFARACNSTSVLDGVPLNCDVAIPMLEYWGDQGSFERWKEENPSDVHMQHVPRAFAHSDDQSDESSGEDPSLSPRRAVPGRTRAPFERLHIRVRKQIVADGLMRPLDWGRETGR---EVSPEEWHENVNRSD-VLVLDCRNTYETDVGRFDTAVPLNTTYFRESWDALNETLKDVDKEAPIMMYCTGGIRCVKTGAYL 323
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A482SWY7_9ARCH (Rhodanese domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWY7_9ARCH) HSP 1 Score: 198 bits (503), Expect = 1.610e-54 Identity = 122/325 (37.54%), Postives = 176/325 (54.15%), Query Frame = 1
Query: 346 IRAITSSALRGKLRLSGRDKRGRVFLP-RDPADGSLETLRRMLKETFP-LGDFPVALYVKTSLGKDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLA-RPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
+ A + L++ + K+ R+ + + + SL LRR+++ FP L D P L KT D++ + DE L L++F+ ++P P LVD P +S + ++SFY F +I PE + +L+ L W P GR+Y+A+EGVNAQMAVP S F +A + + + N + S +F F LH+R R+QIVADGL L+WS R G ELSP +WH +D A +LDCRN+YE+ VG F A+PL+T+FFRESW LE ++ D P++TYCTGGIRCVK+ L
Sbjct: 58 VNAFVDKEILSALQMRNKGKKCRLLISSKAQEEWSLAYLRRLIEIKFPDLTDQPYKLRYKTPSAHDSELKRFSDDEDLKRIFKVFSTSSSPLHLFIQINPGVFPSSTP-LLVD---PLESSTYTLVSFYAFSNITDPEELSQVLRSL-WEPFKALGRIYIAEEGVNAQMAVPSNSFADFVKATQTLALFSSSRFN-VDHEMSTADFHSQQVFKNLHIRVREQIVADGLVGEGLDWS----RSGTELSPLDWHASLDNP-NAVILDCRNTYETDVGRFKGAIPLNTTFFRESWTALEEVLKDVPPTTPVLTYCTGGIRCVKINAYL 371
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A0G4GFL5_9ALVE (Rhodanese domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GFL5_9ALVE) HSP 1 Score: 193 bits (490), Expect = 3.020e-50 Identity = 130/374 (34.76%), Postives = 190/374 (50.80%), Query Frame = 1
Query: 346 IRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPL-----GDFPVALYVKTSLG---KDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEE--EEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNK-----AERRWS---------GDEF--------------------------RESPPFPALHVRARKQIVADGLA-RPLEWSDRSGRVGKELSPEEWHEMMDKE-EGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
+ A + AL+ RL R ++ R+FL L L E FP G F + +T G K+ + ++ AV G + + L V P+ E P++L D+PDP +S ++SFY+F ++ P F+++L++L W PL GRVYVA EG+NAQMA+P +RF+ A ++ +L G+ +N+ ++ W GDE R S PF L V+ R+QIVADGL +PL+ G +L P EWHE +++ G +LDCRN YES VG F+ +LPL+T+FFRESWG LE ++ + D+DAP++ YCTGGIRC K L
Sbjct: 109 VTAAVTDALKDHFRLGSRGRKTRLFLSETELSDPT-ALNEKLVEAFPFLRGIEGGFFLYGTWETGDGFIQKEDAQFAFDPEQSAKSAVETIRQSGREKRLSLIVRPNESEWPPPLPQYLRDMPDPHESSTMVLISFYKFFKVEDPFVFSDILRRL-WTPLKALGRVYVAPEGINAQMAIPGNVLDRFKEATWSLAELKGMRINEDVTVSSDEYWGPTERPPGEDGDEATAGHLPPSSPSSSVGGPGSVGFPVPGRTSAPFDRLKVKPREQIVADGLGEKPLK---APGDTEDDLDPAEWHERLERPPSGQIILDCRNIYESEVGRFEGSLPLNTTFFRESWGVLEEVLEETDKDAPVLMYCTGGIRCAKASAYL 477
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A7S1XV83_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV83_9STRA) HSP 1 Score: 182 bits (461), Expect = 4.300e-49 Identity = 123/337 (36.50%), Postives = 170/337 (50.45%), Query Frame = 1
Query: 319 QVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETFPLGDFPVALYVKTS-----------------LGKDAQRSML----------------TSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEEEAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFERAVEAVEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERL 1230
++ R + K +R T ALR R++ R +RG+VFLP D G + LR ++E L D P + T+ G++ R + +D L A AEG + + + + + P +P+P +W +LSFY F I+ PE A L++L WAP G GRVYVA EG+NAQM V F + L VY N + + +E E+P F ALHVR R +IVADGL R L+W+ + G+E+ PEEWH+++ EE LLDCRNSYE+ VG FD A PL+T+FFRESWGE L
Sbjct: 59 RLARGEIKPVRIFTLGALREFQRVASRKRRGKVFLPVDET-GEVGALRDEVRELLGLKDIPFEMRELTTELREKMLSGWEPNAVLAAGEEVNRETIMGMREEFEVDLAEVATAADLERLWTEAEAEGDAVCIGITAEAEALPFRDPTPALYPGMPEP--GGDWTVLSFYSFEPIEDPEEAAAELRRL-WAPTGATGRVYVANEGINAQMTVASNVMSYFMEGTRLLPALRSVYFN-VDHEFDPEECDEAP-FRALHVRVRDKIVADGLDRELDWN----KGGREVPPEEWHDLVKGEETPILLDCRNSYETEVGRFDGAEPLNTTFFRESWGEAPAL 385
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Match: A0A7J7IJY6_9RHOD (Rhodanese domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJY6_9RHOD) HSP 1 Score: 184 bits (468), Expect = 9.270e-48 Identity = 126/355 (35.49%), Postives = 190/355 (53.52%), Query Frame = 1
Query: 346 IRAITSSALRGKLRLSGRDKRGRVFLPRDPADGSLETLRRMLKETF----PLGDFPVALYVKTSLGKDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDVHPDYEEE----------------------EAPEWLVDVPDPDSASEWEMLSFYRFVDIDQPEAFANMLQQLAWAPLGVRGRVYVAKEGVNAQMAVPCTSTERFER--AVEA--VEKLAGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGRVGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKA---LPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKVGVVL 1311
R + LR LR++ +++GRVF+P A+ L+ L +++E F L P+ + + + GK +++ SD L E + + ++L P + + P + + +MLSFYRFV I +PE A+ L+ PL VRGR+Y+A EGVNAQ+AVP +S + F++ A +A + +LAG+YLN R S +F E PPF LH+R R++IVADGL PL+ + +VG+ELSP EW + ++ + A LLD RN YE+ +GTF A PL+T +RE+W LE + + RD ++T+CTGGIRCVK L
Sbjct: 90 FRVYLAPELRAALRVASSERKGRVFVP--GAEPKLDELHAVIRERFVALKKLHGTPLRVVLVS--GKPDSNAVIDSDARL------KETSQMQVPLYLRFDPQLDPSLIEQFRQRPRGIRFGGTTLQTRQLPPFYPMNKSSVLTDDIQMLSFYRFVSISEPEELASRLR-FYLKPLAVRGRIYIATEGVNAQVAVPVSSLDAFQQLFAPDAPHLTELAGIYLNMDPYRLSAAQFAEQPPFRNLHIRCRRKIVADGLKEPLDLA----QVGRELSPAEWQKALE-DPHAILLDVRNDYETQLGTFQSAGDARPLNTRTYRETWKALEERLANEPRDRRVLTFCTGGIRCVKAAAYL 428 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1950.6274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1950.6274.1 >prot_Ecto-sp13_S_contig1950.6274.1 ID=prot_Ecto-sp13_S_contig1950.6274.1|Name=mRNA_Ecto-sp13_S_contig1950.6274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=438bp MLSMACCAALGSVSLSLLLLKATAFVPGPSLPAQQRAPLPYRGQAAAAYSback to top mRNA from alignment at Ecto-sp13_S_contig1950:159..7038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1950.6274.1 ID=mRNA_Ecto-sp13_S_contig1950.6274.1|Name=mRNA_Ecto-sp13_S_contig1950.6274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6880bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1950:159..7038- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1950:159..7038- >mRNA_Ecto-sp13_S_contig1950.6274.1 ID=mRNA_Ecto-sp13_S_contig1950.6274.1|Name=mRNA_Ecto-sp13_S_contig1950.6274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1314bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1950:159..7038- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |