mRNA_Ecto-sp13_S_contig19483.6262.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19483.6262.1
Unique NamemRNA_Ecto-sp13_S_contig19483.6262.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19483.6262.1 vs. uniprot
Match: D8LHV4_ECTSI (Inositol-pentakisphosphate 2-kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-16
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1 
Query:    1 NPADWSYLAEGGFHIILRYDGEDPVLSGRILRIGKK 108
            NPADWSYLAEGGFHIILRYDGEDPVLSGRILRIGKK
Sbjct:   14 NPADWSYLAEGGFHIILRYDGEDPVLSGRILRIGKK 49
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BLAST of mRNA_Ecto-sp13_S_contig19483.6262.1 vs. uniprot
Match: A0A0G4I393_9ALVE (Inositol-pentakisphosphate 2-kinase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I393_9ALVE)

HSP 1 Score: 52.4 bits (124), Expect = 8.280e-7
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 1 
Query:    1 NPADWSYLAEGGFHIILRYDGEDPVLSGRILRIGKK 108
            N ADWSY+AEGG HI+ +Y G+D   SGR+LRI K+
Sbjct:   14 NVADWSYVAEGGLHIVCKYLGKDAKYSGRVLRIPKQ 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19483.6262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHV4_ECTSI1.020e-16100.00Inositol-pentakisphosphate 2-kinase n=2 Tax=Ectoca... [more]
A0A0G4I393_9ALVE8.280e-761.11Inositol-pentakisphosphate 2-kinase n=1 Tax=Chrome... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19483contigEcto-sp13_S_contig19483:3063..3170 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score82.0
Seed ortholog evalue6.1e-14
Seed eggNOG ortholog2880.D8LHV4
Preferred nameIPPK
Model size108
KEGG rclassRC00002,RC00078
KEGG koko:K10572,ko:K12189
KEGG ReactionR05202
KEGG Pathwayko00562,ko01100,ko04070,ko04144,map00562,map01100,map04070,map04144
KEGG ModuleM00132,M00410
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003341,GO:0003351,GO:0003674,GO:0003824,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005975,GO:0006020,GO:0006066,GO:0006355,GO:0006356,GO:0006793,GO:0006796,GO:0006810,GO:0006928,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0008150,GO:0008152,GO:0009058,GO:0009799,GO:0009855,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015630,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019637,GO:0019751,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032400,GO:0032401,GO:0032402,GO:0032501,GO:0032502,GO:0032947,GO:0032958,GO:0033059,GO:0035299,GO:0036064,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045893,GO:0045935,GO:0045943,GO:0046165,GO:0046173,GO:0046835,GO:0046907,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051875,GO:0051904,GO:0051905,GO:0052746,GO:0060255,GO:0060287,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090407,GO:0120025,GO:0120038,GO:1901576,GO:1901615,GO:1901617,GO:1901836,GO:1901838,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons1
EggNOG free text desc.inositol pentakisphosphate 2-kinase activity
EggNOG OGsKOG4749@1,KOG4749@2759
EC2.7.1.158
Cds size108
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462987.9212112-CDS-Ecto-sp13_S_contig19483:3062..31701681462987.9212112-CDS-Ecto-sp13_S_contig19483:3062..3170Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19483 3063..3170 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19483.6262.1prot_Ecto-sp13_S_contig19483.6262.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19483 3063..3170 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19483.6262.1

>prot_Ecto-sp13_S_contig19483.6262.1 ID=prot_Ecto-sp13_S_contig19483.6262.1|Name=mRNA_Ecto-sp13_S_contig19483.6262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
NPADWSYLAEGGFHIILRYDGEDPVLSGRILRIGKK
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mRNA from alignment at Ecto-sp13_S_contig19483:3063..3170+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19483.6262.1 ID=mRNA_Ecto-sp13_S_contig19483.6262.1|Name=mRNA_Ecto-sp13_S_contig19483.6262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19483:3063..3170+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACCCCGCGGACTGGTCGTACCTAGCAGAAGGCGGCTTCCACATTATCCT
TCGCTACGACGGCGAGGACCCGGTCCTGTCGGGCCGGATCCTCAGAATTG
GGAAGAAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19483:3063..3170+

>mRNA_Ecto-sp13_S_contig19483.6262.1 ID=mRNA_Ecto-sp13_S_contig19483.6262.1|Name=mRNA_Ecto-sp13_S_contig19483.6262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19483:3063..3170+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACCCCGCGGACTGGTCGTACCTAGCAGAAGGCGGCTTCCACATTATCCT
TCGCTACGACGGCGAGGACCCGGTCCTGTCGGGCCGGATCCTCAGAATTG
GGAAGAAA
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