mRNA_Ecto-sp13_S_contig1945.6249.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: D7FKC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC7_ECTSI) HSP 1 Score: 1806 bits (4677), Expect = 0.000e+0 Identity = 1096/1371 (79.94%), Postives = 1111/1371 (81.04%), Query Frame = 1
Query: 1 KVADVIKNSSTARTPARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLDVEYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGRSPDIGLLLEWARQFQASNGMSDKKVVRKVLASAGLEPPVATVPEPTGYDALAAAVPTSRTATSKIFASALAKKPSNHRWGNQEMLARPDASVDGDAASTLGPSGRRLRKAGARGGPGARERFLSDVIDEEDLSIVSPLLGRDEGGDGXXXXXXXXGAGGGADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNEGGAGIPDXXXXXXXXXXXXXXXXXXXXXXAGGEXXAGGAEGQAR----------------GGDRR------------------------IGGDELLXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARAGEDADGAIGEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFGGFAVGVDPAKPAELTDHAPVPQPLEVSVDRLSRASSAGCSSALSDPTVSGEEVGQECGNGSDGTEFFGSNGNDVVGDSGAIDSTRDAEGATTAASTAAPSIGIPPSISLEQQPQEQHGAWPTSFGSALNRGGDGVGEKAGSLTVEEIMSELRTVEVSSLTRDNAYDRLLALCSAANTARLPPPPDSCETIXXXXXXXXXXXPTAATNAVMDNARLVAEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSTATMGLRASVPACRRRVSTAKHLVGHVVVVGFPARPSHLECFLRPLKGWTGGAGMGGGREVGGGGVPVVLVADDVSRLESALEVVDRHGYVNTSEVYLFEGSPVSRTDLENAGVRTAKAVLVMKDSKSTRFNYGGSGDPLRDAEALVSFIKMEDGLLSEDQHVVVELESSANVRFLHARAEANSLSAIAGLGGAGAGGAADEAHYLWPKFAAGMTYNSSFVDSMFGQAFYRPSRIALLKRLLLLARGEQQEQPGMASRSPSQXXXXXXXXXXXXXXXXXXXXXEGDGLGRECCLRQMAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 3993
+VADVIKNSSTARTPARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQ AAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLD EYNVVVNPGGDYRI KGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDG SPD GLLLEWARQFQASNGMSDKKVVRKVLASAGLEPPVAT P GYDALAAAVPTSRTATSKIFASALAKKPSNH+WG QEMLARP SV GDAA+TL P GRRLRKAGARGGPGARERFLSDVIDEEDLS+VSPLLGRDEGGD G G GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G G D GGE GG EG G +R IGG+E XXXXXXXXXXXXXXXXXXXXXXXXXXXGAARAGEDAD A GEAS XXXXXXXXXX GGFAVGVDPAKPAELT++APVPQPLEVSVD LSRASSAGCSSALSDP V GEEVG+E GNG DGTE FG+NGN VVGDS AIDSTRDAEGATTAAS AAP I IP S SLEQQ QEQ GAWPTS GSA N GGDGVGE+AG LTVEEIMSEL+ VEVSSLTRD+AYDRLLALCSAANTARLP P+S ETI XXXX PTAATNA+MDNA PSHLECFLRPLKGWTGGAGMGGGREVGGGGVPVVLVADDVSRLESALEVVDRHGYVNTSEVYLFEGSPVSRTDLENAGVRTAKAVLVMKDSKSTRFNYGGSGDPLRDAEALVSFIKMEDGLLSEDQHVVVELESSANVRFLHARAEA SLSAI LGGAGAGGAADEAHYLWPKFAAGMTYNSSFVDSMFGQAFYRPSRIALL RLLLLARGEQQEQPGMASRSP Q EGDGLGRECCLRQMAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL
Sbjct: 372 RVADVIKNSSTARTPARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQ-AAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLDGEYNVVVNPGGDYRISKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGHSPDTGLLLEWARQFQASNGMSDKKVVRKVLASAGLEPPVATTPGSRGYDALAAAVPTSRTATSKIFASALAKKPSNHQWGKQEMLARPGGSVAGDAAATLDPFGRRLRKAGARGGPGARERFLSDVIDEEDLSLVSPLLGRDEGGDRGGAGRAGRGEGDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDGKAD-----------------------GGEVVVGGDEGTPXXXXXXXXXXXXXXXXXGAERXXXXXXXXXXXXXXXXXXXXXXXXTIGGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARAGEDADRA-GEASEAKGGAGRDEGETGGGSEXXXXXXXXXXXXXGGFAVGVDPAKPAELTEYAPVPQPLEVSVDCLSRASSAGCSSALSDPAVPGEEVGEERGNGRDGTEVFGNNGNHVVGDSSAIDSTRDAEGATTAASRAAPCIEIPSSTSLEQQRQEQQGAWPTSSGSASNPGGDGVGEQAGLLTVEEIMSELKAVEVSSLTRDDAYDRLLALCSAANTARLPTRPESGETITTPXXXXAAAVPTAATNAMMDNA-----------------------------------------------------------------------PSHLECFLRPLKGWTGGAGMGGGREVGGGGVPVVLVADDVSRLESALEVVDRHGYVNTSEVYLFEGSPVSRTDLENAGVRTAKAVLVMKDSKSTRFNYGGSGDPLRDAEALVSFIKMEDGLLSEDQHVVVELESSANVRFLHARAEAKSLSAIVALGGAGAGGAADEAHYLWPKFAAGMTYNSSFVDSMFGQAFYRPSRIALLNRLLLLARGEQQEQPGMASRSPPQGPNQGETRSPSETGASPGL--EGDGLGRECCLRQMAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 1644
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A6H5LKR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKR1_9PHAE) HSP 1 Score: 1642 bits (4253), Expect = 0.000e+0 Identity = 1050/1314 (79.91%), Postives = 1064/1314 (80.97%), Query Frame = 1
Query: 1 KVADVIKNSSTARTPARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLDVEYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGRSPDIGLLLEWARQFQASNGMSDKKVVRKVLASAGLEPPVATVPEPTGYDALAAAVPTSRTATSKIFASALAKKPSNHRWGNQEMLARPDASVDGDAASTLGPSGRRLRKAGARGGPGARERFLSDVIDEEDLSIVSPLLGRDEGGDGXXXXXXXXGAGGGADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNEGGAGIPDXXXXXXXXXXXXXXXXXXXXXXAGGEXXAGGAEGQARGGDRRIGGDELLXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------GAARAGEDADGAIGEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA----------------------------------FGGFAVGVDPAKPAELTDHAPVPQPLEVSVDRLSRASSAGCSSALSDPTVSGEEVGQECGNGSDGTEFFGSNGNDVVGDSGAIDSTRDAEGATTAASTAAPSIGIPPSISLEQQPQEQHGAWPTSFGSALNRGGDGVGEKAGSLTVEEIMSELRTVEVSSLTRDNAYDRLLALCSAANTARLPPPPDSCETIXXXXXXXXXXXPTAATNAVMDNARLVAEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSTATMGLRASVPACRRRVSTAKHLVGHVVVVGFPARPSHLECFLRPLKGWTGGAGMGGGREVGGGGVPVVLVADDVSRLESALEVVDRHGYVNTSEVYLFEGSPVSRTDLENAGVRTAKAVLVMKDSKST-----------RFNYGGSGDPLR-----DAEALVSFIKM-----------EDGLLSEDQ-------------------------------------HVVVELESSANVRFLHARAEANSLSAIAGLGGAGAGGAADEAHYLWPKFAAGMTYNSSFVDSMFGQAFYRPSR 3597
+VADVIKNSSTARTPARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQ AAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKR GQAGLD EYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGRSPDIGLLLEWARQFQASNGMSDKKVV+KVLASAGLEPPVATVPE GYDALAAAVPTSRTATSKIFASALAKKPSNHRW QEML RP SV GDAASTLGPSGRRLRKAGARGGPGARERFLSDVIDEEDLSIVSPLLGRDEGGD G GGGADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGAGI XXXXXXXXXXXXXXXXXXXXXX E AGGAEG+ RG +R I GDE+L XXXXXXXXXXX GAARA ED DGA GEASXXXXXXXXXX XXX XXX FGG+AVGVDPAKPAELTDHAPVP PLE SVD LSRASSAGCSSALS P V GEEVGQE GNGSDGTE FG+NGNDVVGDS AID TRDAEGA AAS A PSIGIPPS SLEQQPQEQ G WPTS GSA NRGGDGVGEKAGSLTVEEIMSELRTVEVSSLTRD AYD L+ALCSAANTARLPP P+S ETI PTAATNAVMDNARLVAEAGD XXXXXXXXXXXXXXXXXX STATMGLRASV ACRRRVSTAKHLVGHVVVVGFPARPSHLECFLRPLKGWTG AGMGGGREVGGG VPVVLVADDVS LESALEVVDRHGYVNTSEVYLFEGSPVSRTDLENAGVRTAKAVLVMKDSK F++ P +AE LV I + D LS HVVVELESSANVRFLHARAEANSLSAIAGLGGAG+GGAADEAHYLWPKFAAGMTYNSSFVDSMFGQAFYRPSR
Sbjct: 384 RVADVIKNSSTARTPARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQ-AAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRLGQAGLDGEYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGRSPDIGLLLEWARQFQASNGMSDKKVVKKVLASAGLEPPVATVPESAGYDALAAAVPTSRTATSKIFASALAKKPSNHRWDKQEMLGRPGGSVTGDAASTLGPSGRRLRKAGARGGPGARERFLSDVIDEEDLSIVSPLLGRDEGGDEGGTGRAGRGEGGGADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGIAXXXXXXXXXXXXXXXXXXXXXXXXXXEGEAGGAEGKFRGDERGISGDEVLAGGTDGDEGTFSGEXXXXXXXXXXXRRXKRGIDXXXXXXXXXXXGAARADEDIDGA-GEASXXXXXXXXXXLGIGXXXGEARGASKXXXXXXXXXXAKGGAGGXEGXXXXXXXXXXXXXXXXXXXFGGYAVGVDPAKPAELTDHAPVPLPLEFSVDCLSRASSAGCSSALSGPAVPGEEVGQEWGNGSDGTEVFGNNGNDVVGDSRAIDPTRDAEGAKIAASRAVPSIGIPPSTSLEQQPQEQQGVWPTSSGSASNRGGDGVGEKAGSLTVEEIMSELRTVEVSSLTRDGAYDHLVALCSAANTARLPPRPESSETIITPTTPTAAAVPTAATNAVMDNARLVAEAGDGXXXXXXXXXXXXXXXXXX--------STATMGLRASVTACRRRVSTAKHLVGHVVVVGFPARPSHLECFLRPLKGWTGRAGMGGGREVGGGCVPVVLVADDVSGLESALEVVDRHGYVNTSEVYLFEGSPVSRTDLENAGVRTAKAVLVMKDSKERCAYCKDLDLVELFSFASLAGPCSVNNSYNAERLVCAIAIPIFAILLISLVHDFFLSRALPPRRTVLVNWAWVRRRWAQRLFVAVSRLWYHYLPIRVHVVVELESSANVRFLHARAEANSLSAIAGLGGAGSGGAADEAHYLWPKFAAGMTYNSSFVDSMFGQAFYRPSR 1687
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A7R9UDC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC3_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.780e-57 Identity = 141/370 (38.11%), Postives = 206/370 (55.68%), Query Frame = 1
Query: 73 VRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLDVEYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQK----KLPDGRSPDIGLLLEW 1170
V +RH+V+ G++ N+ L+E+FH DH V+VV++SP P I A++ +P YR +VTYL+GSPL+ L +A V A+ VMVL +K +H EDMG+ L+A+SV + RR G GPR+ EL+ P A HL+ AG++HVV + +KLS+LA SCLCPG + ++ NL+ S + +P VL SW EYY+G K Y VEFSP V F +A IF+ FE++L+ V G GL E VV+NPG Y I + D F+LA++ DA++IW+Y+ ++ PEE+ LA+ T E +D+ + + L Q K+ R+ GL+ EW
Sbjct: 391 VTDRHLVLMGAITFDNVTTALREIFHPDH--RESAKVQVVILSPNEPTTPILAVIRNPAYRSKVTYLKGSPLNALDLARADVRTAAGVMVLVNKHSQETHVEDMGVVLRALSVANFCQEQRRNGSGPRVFTELIQPQATRHLR-TAGLRHVVCTDALKLSLLAHSCLCPGLSTLLVNLMRSHSVMPPAVLLDASWYVEYYMGTMKQLYVVEFSPHLHHVRFDEAAALIFQEFEIVLLGV-FNTSGVEGL--EGRVVLNPGHKYSIRRDDYAFVLADTARDAQLIWEYVK------------ATYEDIEDDPEEQTELALLLAHTTADGEYDRE--IDNALMGQKLRAQQVIRSCKMRRKRTGHQGLIEEW 740
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A6H5L2Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y8_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.710e-47 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1
Query: 3745 EGDGLGRECCLRQMAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 3993
EGDGLGRECCLRQMAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL
Sbjct: 54 EGDGLGRECCLRQMAVPPSLLGHSFGEMFQHLAAPPLRCVAFALLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 136
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A7S1GD92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD92_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.360e-29 Identity = 74/186 (39.78%), Postives = 119/186 (63.98%), Query Frame = 1
Query: 82 RHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEV 639
RHVV+ GSV+ TNL + L E+FH DHG+ ++VVV+SP P + +L++ RYR R+ YL+GSPL+D+ + + V A+AV +LA+ P+ AED L+L+ I+V V D +LV+L+ P + L++ + G+ VV +++LS++AQSCLCPG++ ++ NL+ S + P E+
Sbjct: 213 RHVVVTGSVSFTNLNSFLSELFHTDHGDQTAT-LKVVVLSPHEPSEGLLSLMQSVRYRQRLVYLRGSPLNDEDMERCHVATAAAVFLLANNLAPNEEAEDASLTLKTIAVKKFVPDD------VTVLVQLMRPASKLNVN-SVGVNLVVCQDELRLSLMAQSCLCPGFSTMIVNLVRSHSKPPVEL 390
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A7S1CL09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL09_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.310e-27 Identity = 103/305 (33.77%), Postives = 151/305 (49.51%), Query Frame = 1
Query: 85 HVVMCGS-VNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLV--ELVDPNAALHLQQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGS--WLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRH-------------GQAGL-DVEYNVVVNPGGDYRIGKGDRGFLLAESQADARVI--WDYM 936
H+V+CG+ + + L E +H DHG ++ VV + P P + +LL P + +V Y+ GSPL L KAR DASAV VL + S H DM AI ++ ++ P + V +LV+P +H A H+V ++K+ +LA+SCLCPG++ ++ANL+ S + L W+ EY G + YS+E S AF G LF A F F L L AVET+R G+ L +V +++NP DY I GDRGF +A+ A + W+ M
Sbjct: 299 HIVVCGNDITFAAARGFLMEFYHNDHGEQKMK---VVFLCPNNPNSELGSLLLDPMFDDKVQYITGSPLVSMHLNKARPHDASAVFVLTSQF--SEH--DMTTDATAILIVKAIK-----STVPWVTVYCQLVNPLNKMHSSWAEW-DHLVCIEELKMGILAKSCLCPGFSTLIANLITSSSDYDVATLDHVDKMWVEEYLSGYGQEVYSLEMSSAFVGKLFCVAANVCFCEFGLCLFAVETRRDARPRKTATPRAEDGEEELGEVPTRILINPK-DYTIRSGDRGFFIADDHEKAATVTTWNGM 589
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A7S0VY48_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VY48_9CRYP) HSP 1 Score: 126 bits (317), Expect = 1.880e-25 Identity = 92/312 (29.49%), Postives = 149/312 (47.76%), Query Frame = 1
Query: 46 ARAVSLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQQAA-GIKHVVSSA---QVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQG-SWLAEYYVGAKKTFYSVEFSPAFT--GVLFGDAVVHIFEYFELILVAVETKRHGQAGLDVEYNVVVNPGGDYRIGKGDRG----FLLAESQADARVIWDYMAEDG 948
AR V +P S R +HV++CGS++ + L+E FH DH R V +V + PP + LL P Y R +L+GSP ++ L++A VL++K ED L+ ++ HV+ + G +++L+ P +H + G + + ++KL +LA+SCL PG+ +++NL S +A E+ SW+ EY G++ Y V SP F F D + IF+ + + A+E +D VV+NP +Y+I G +G F+LA Q I Y +G
Sbjct: 355 ARMVYVPDSARSQHVIVCGSISFETARDFLEEFFHPDHSQ---RDVTIVFLDTSPPSFDMQFLLRSPEYSARTMFLEGSPFNEQDLMRAEAAKCQLFFVLSNKFTYDVEREDFATILRCLAFKEHVKHNSPAG-DINTIMQLIRPENKVHFTSSIHGTSEKIQTICMDEIKLHLLAKSCLIPGFCTLISNLTRSASA---EIPNNAESWIKEYAAGSEYEIYRVPLSPHFRKGDRKFKDCAMEIFDKLQCTMFAIEI-----TDMDGNTQVVLNPA-NYQIPAGAKGSVKAFILATDQKQVEKISLYKLVEG 653
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A5B8MSS4_9CHLO (Calcium-activated potassium channel protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSS4_9CHLO) HSP 1 Score: 122 bits (307), Expect = 2.820e-24 Identity = 84/300 (28.00%), Postives = 147/300 (49.00%), Query Frame = 1
Query: 58 SLPSSVRERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHL---QQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVET-KRHGQAGLDVEYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAED 945
S SS HVV+CGSV + L+E H DHGN +++ VV++SP+ P + +L +Y+ + Y++GS L + L + + + A VL+++ ED ++A++V + +++++++ P LH Q + I +V ++K+S+L Q+CLCPG++ ++ NL++S ++P E W EY G FY S +F G F + V I+ FE + AVE R G+ + V P D +G + +++A A +I Y +D
Sbjct: 293 SYSSSDAHPHVVVCGSVTYRGIVDFLKEFLHEDHGNADMK---VVILSPEHPSDEMLGILRSTKYKANLIYIEGSCLQNKDLKRCDLSKSKACFVLSNQYCADPDEEDSSNIIRALAVKRFARATQGD---MQVILQIIRPENKLHFIASMQQSEIDQIVCINEIKMSMLGQNCLCPGFSTLIGNLIQSSDSVPPEDASSEPWQFEYCHGCGYEFYRTPLSTSFEGRTFTEIVDIIYTKFECVTFAVEVLDREGKR------KIAVAPL-DLIVGSKAKAYVIAPDSEVAAMISTYYDKD 579
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A7S0W847_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W847_9CRYP) HSP 1 Score: 120 bits (301), Expect = 1.460e-23 Identity = 86/300 (28.67%), Postives = 151/300 (50.33%), Query Frame = 1
Query: 76 RERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGP-RLLVELVDPNAALHLQQAA----GIK-HVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLDVEYNVVVNPGGDYRIGKGDRG---FLLAESQADARVIWDYMAEDG 948
+ RH ++CG + A+N +QE FH DHG + +V++ P P ++ L+ H R +VTYL+GSPL ++ L +A+ V++LA+ S AED G L+A+++ ++ L + GC +++EL P + H Q +A G K +++ +++L+++A+SCLCPG+ +++NL+ S +A A+ W+ EY G Y + SP F + F + +++ + +E K VV+NP + K F+LA+ Q A I + G
Sbjct: 354 KTRHAIVCGHLTASNAAEFIQEFFHEDHGMSD---GHLVILCPDTPNKDMEILV-HSRSH-QVTYLEGSPLIEEDLERAQASRCEKVILLANILCADSQAEDSGTILRALAIRKYLSL--KPGCSNIPIILELRRPGSKHHFQSSAFGGQGDKANIICIDEIRLNLIAKSCLCPGFCTMISNLVMSSSATLADDSNVPPWVQEYAEGCGLEIYRTQLSPKFKNMAFIEIAKIVYKRLNCTMFGIEVKDAKGTS-----KVVINPARFEILAKDLEDTWVFVLADDQETANQISTWKLHKG 641
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Match: A0A7S0Y3V1_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y3V1_HEMAN) HSP 1 Score: 120 bits (300), Expect = 1.810e-23 Identity = 78/265 (29.43%), Postives = 142/265 (53.58%), Query Frame = 1
Query: 76 RERHVVMCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHPRYRGRVTYLQGSPLHDDSLLKARVDDASAVMVLADKAPPSSHAEDMGLSLQAISVMTHVELDRRQGCGP-RLLVELVDPNAALHLQQAA-----GIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKR-HGQAGLDVEYNVVVNP 849
++RH ++CG + A+N +QE FH DHG + +V++ P P ++ L+ H R +VTYL+GSPL ++ L +A+ +++LA+ S AED G L+A++V ++ L ++GC +++EL P + H Q +A +++ +++L+++A+SCLCPG+ +++NL+ S +A +E W+ EY G Y + SP F + F ++E + A+E K G++ +V+NP
Sbjct: 366 KQRHAIVCGHLTASNAAEFIQEFFHEDHGMSD---GHLVILCPDTPDNNMEILV-HSRSH-QVTYLEGSPLIEEDLERAQASRCEKIILLANVLSADSQAEDSGTILRALAVRKYLSL--KEGCADIPIVLELRRPGSKHHFQSSAFGGSGDNANIICIDEIRLNLIAKSCLCPGFCTMISNLVMSSSATVSEDSNVQPWVREYAHGCGLEIYRSQLSPKFRRMQFIQIAQVVYEQIGCTVFALEVKDPRGKS------KIVINP 617 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1945.6249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1945.6249.1 >prot_Ecto-sp13_S_contig1945.6249.1 ID=prot_Ecto-sp13_S_contig1945.6249.1|Name=mRNA_Ecto-sp13_S_contig1945.6249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1301bp MCGSVNATNLKARLQEMFHLDHGNHNIRWVRVVVMSPKPPGPRIDALLEHback to top mRNA from alignment at Ecto-sp13_S_contig1945:127..12818+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1945.6249.1 ID=mRNA_Ecto-sp13_S_contig1945.6249.1|Name=mRNA_Ecto-sp13_S_contig1945.6249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12692bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1945:127..12818+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1945:127..12818+ >mRNA_Ecto-sp13_S_contig1945.6249.1 ID=mRNA_Ecto-sp13_S_contig1945.6249.1|Name=mRNA_Ecto-sp13_S_contig1945.6249.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1945:127..12818+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |