prot_Ecto-sp13_S_contig19439.6242.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19439.6242.1
Unique Nameprot_Ecto-sp13_S_contig19439.6242.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A6H5L6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K9_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.030e-29
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 IQDDGGEPEDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            IQDDGGE EDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWG TTNQCPMCK
Sbjct:  560 IQDDGGELEDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGVTTNQCPMCK 612          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: D7FVY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY3_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 3.570e-29
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    2 QDDGGEPEDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            QDD GE EDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK
Sbjct:  592 QDDEGEAEDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 643          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A6G0XV56_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV56_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.640e-8
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    4 DGGEPED-CSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            +G + ED C IC+  V  D  Q  L KCVH FHF CI++W + TN CPMCK
Sbjct:   37 EGEDSEDMCCICLDNVELDT-QGFLLKCVHTFHFDCILQWAKVTNLCPMCK 86          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A7S3XKA5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKA5_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 1.860e-7
Identity = 25/52 (48.08%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    5 GGEPED---CSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            GG+ ED   CSIC C    + D  +   C HAF F+CI KW +T N CP+CK
Sbjct:   46 GGDAEDQIICSICFC----EPDLKATIPCNHAFCFSCIHKWSQTENSCPLCK 93          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A078ADU1_STYLE (Ring u-box protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078ADU1_STYLE)

HSP 1 Score: 54.7 bits (130), Expect = 4.190e-7
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   11 CSICMCPVTGDEDQASLDKCVHAFHFTCIVKWG-ETTNQCPMCK 53
            C+IC C +  D DQASL+ C+H F F CI +W  +  N CP+CK
Sbjct:  283 CTICQCEME-DNDQASLESCIHLFCFVCIKEWATKAENTCPLCK 325          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A7S2KPG2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KPG2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.590e-7
Identity = 23/50 (46.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:    4 DGGEPEDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            D    + C IC+  V   E++A +D C H F FTCI KW E  N CP+CK
Sbjct:  151 DADTDKSCCICL-EVPTQENEARVDNCEHIFCFTCIEKWSERENTCPLCK 199          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A6J1ES83_CUCMO (uncharacterized protein LOC111435504 n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1ES83_CUCMO)

HSP 1 Score: 53.5 bits (127), Expect = 9.410e-7
Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    4 DGGEPE---DCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            DG  PE   DCS+C C   G E +     C H FH +CI+KW + TN CP+C+
Sbjct:  230 DGFRPEEARDCSVC-CDELGGETEVRRLPCGHVFHKSCILKWLQLTNSCPLCR 281          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A1Z5JEA1_FISSO (RING-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEA1_FISSO)

HSP 1 Score: 53.1 bits (126), Expect = 1.440e-6
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 0
Query:   11 CSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCK 53
            C+IC+C    +E  A LD C H F F+CI KW E  N CP+CK
Sbjct:  233 CTICLCEPDKEEVSA-LDGCNHFFCFSCIEKWSERENSCPLCK 274          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A812RED2_9DINO (ATL28 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RED2_9DINO)

HSP 1 Score: 52.8 bits (125), Expect = 1.960e-6
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = 0
Query:    1 IQDDGGEPEDCSICMCPVTGDEDQASLDKCV---HAFHFTCIVKWGETTNQCPMCK 53
            ++D+GG P+ CSIC+   + D+    +  C    H FH  C+  W  T   CP+C+
Sbjct:  325 VEDEGGYPKSCSICLVDFSADDTDIVITPCSGQRHIFHSACLATWFRTAQTCPLCR 380          
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Match: A0A812TVE2_SYMMI (AFC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TVE2_SYMMI)

HSP 1 Score: 52.8 bits (125), Expect = 2.010e-6
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = 0
Query:    1 IQDDGGEPEDCSICMCPVTGDEDQASLDKCV---HAFHFTCIVKWGETTNQCPMCK 53
            ++D+GG P+ CSIC+   + D+    +  C    H FH  C+  W  T   CP+C+
Sbjct:  873 VEDEGGYPKSCSICLVDFSADDTDIVITPCSGQRHIFHSACLATWFRTAQTCPLCR 928          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19439.6242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6K9_9PHAE1.030e-2996.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVY3_ECTSI3.570e-2996.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0XV56_9STRA4.640e-852.94Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S3XKA5_HETAK1.860e-748.08Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A078ADU1_STYLE4.190e-750.00Ring u-box protein n=1 Tax=Stylonychia lemnae TaxI... [more]
A0A7S2KPG2_9STRA5.590e-746.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6J1ES83_CUCMO9.410e-745.28uncharacterized protein LOC111435504 n=1 Tax=Cucur... [more]
A0A1Z5JEA1_FISSO1.440e-651.16RING-type domain-containing protein n=2 Tax=Fistul... [more]
A0A812RED2_9DINO1.960e-633.93ATL28 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A812TVE2_SYMMI2.010e-633.93AFC2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 11..52
e-value: 2.2E-4
score: 30.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 10..53
e-value: 3.7E-11
score: 43.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 11..53
score: 11.678
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..57
e-value: 5.7E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR45969FAMILY NOT NAMEDcoord: 4..53
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19439contigEcto-sp13_S_contig19439:623..811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19439.6242.1mRNA_Ecto-sp13_S_contig19439.6242.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19439 623..811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19439.6242.1 ID=prot_Ecto-sp13_S_contig19439.6242.1|Name=mRNA_Ecto-sp13_S_contig19439.6242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
IQDDGGEPEDCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCP
MCKVLDTPPPPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD