prot_Ecto-sp13_S_contig19257.6166.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19257.6166.1
Unique Nameprot_Ecto-sp13_S_contig19257.6166.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length244
Homology
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: D7FJ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ42_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 5.910e-102
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0
Query:    1 QVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKREKARLAKK 155
            +VCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLI KREKARLAKK
Sbjct:   44 KVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLITKREKARLAKK 198          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: A0A6V1S5E2_HETAK (Replication termination factor 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S5E2_HETAK)

HSP 1 Score: 162 bits (409), Expect = 7.450e-45
Identity = 80/140 (57.14%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    1 QVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEK----EDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTE-DDIVGLAPTDEE 135
            + CAISNEVL+EPV ACELG LYNK+ + + LL + LN +F HIRGLKD+VE KLTPNPS+E+    +D       PA+++CPVTL EMNGS  FVV+  TGWV+S++A +EVG   LQ EYGPF   +D+V LAP +E+
Sbjct:   39 KTCAISNEVLQEPVVACELGNLYNKEAIFTCLLEKTLNQSFQHIRGLKDLVEVKLTPNPSYEEKGAEDDIKLKSELPAKYICPVTLIEMNGSQPFVVVWPTGWVLSDRALREVGAPALQAEYGPFRPGEDVVRLAPPEED 178          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: A0A836CNB3_9STRA (Rtf2 RING-finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB3_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.310e-44
Identity = 75/142 (52.82%), Postives = 104/142 (73.24%), Query Frame = 0
Query:    1 QVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPT-DEERETRTR 141
            +VCA+SNE L+EP+  CELGYLYNKD ++S LL+R L+P F H+RGLKD++E KLT N ++++ D      E   +MCP+T QE  G + F ++ STGWV+S++A  EVGI GLQ EYGPF +DD++ LAP  DE+++ R R
Sbjct:   42 KVCAVSNERLQEPIVVCELGYLYNKDAVLSALLDRTLDPTFAHLRGLKDLIEPKLTANRAYDESDS-----ESPPYMCPITFQEFTGRYPFSIIRSTGWVISDRAIAEVGIEGLQAEYGPFVQDDVMRLAPDKDEQQQLRQR 178          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: A0A7S3H2A3_9STRA (Replication termination factor 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2A3_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.230e-40
Identity = 71/147 (48.30%), Postives = 101/147 (68.71%), Query Frame = 0
Query:    1 QVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKR 147
            ++C  S E LR P++ CELG LYN + +IS LL++ ++ A +H+R +KD+ + KL PNP++  +D   DG  PA F CP+T  E NG+H FV + STG+V+SEKA KE+GI  LQ EYGPF  +D+V L PT  E E +T Q++ +R
Sbjct:   63 RLCTHSGESLRVPISCCELGNLYNTESIISALLDKKVSAAASHVRNMKDLKQLKLFPNPNYSPDDEV-DGELPAMFSCPITKMEFNGNHPFVAIWSTGYVLSEKAIKELGIEALQSEYGPFQAEDLVKLIPTQFELEAQTAQMVQRR 208          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: W7TG44_9STRA (Replication termination factor 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG44_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.500e-39
Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 0
Query:    1 QVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAFDGPEPA---------------------------RFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERET 138
            +VCA+S+E LR+PV ACELG+LYNK+ ++  LL   LNPAF HIRG+KD++ C+ T NP++  E  A    + A                           +++CPV   EMN    FVV+ STGWV+SE+A KEVG A LQ+EYGPF  DD++ L P DEE ET
Sbjct:   41 RVCAVSSERLRDPVVACELGHLYNKEAVLLALLEHTLNPAFAHIRGMKDLIACRFTINPNWTDETAAQASAQEAWAANEAKGEGTNAGTMVGSFAEEGAVSKYICPVARVEMNAKQPFVVIRSTGWVLSERALKEVGAASLQDEYGPFDSDDLIRLVP-DEEEET 204          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: A0A7S2RH24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH24_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.930e-31
Identity = 68/174 (39.08%), Postives = 105/174 (60.34%), Query Frame = 0
Query:    1 QVCAISNEVLR--EPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDRAF-----------------DGPEPARFMCPVTLQEMNGSHAFVVLMSTGW---VMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKREKARL 152
            + CA+SNE L+   PV A E+G L++K+ ++  LL++++   F+HIRGL+D++EC+   NPS+ +E ++                  D    + + CPV   EMNG H FVVL  T     V+SE+A K+VG   LQEEYGPFT DD++ + P++EER     ++ A+RE+ R+
Sbjct:   43 RTCALSNEALQPGSPVVADEVGNLFSKEAVLKRLLDKNMPVEFSHIRGLRDVIECRFFANPSWSEEGKSSEAAGGTSSSGPGMQWSTDNDSLSPYSCPVASVEMNGRHPFVVLRGTTKPVNVLSERAIKQVGTDALQEEYGPFTGDDVIKVVPSEEERPQLVARMAARREEERI 216          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: T1J2E7_STRMM (Replication termination factor 2 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J2E7_STRMM)

HSP 1 Score: 123 bits (309), Expect = 3.780e-30
Identity = 72/159 (45.28%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    3 CAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAF-NHIRGLKDIVECKLTPNPSFEK-----EDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKREKARLAKK 155
            CA+S E+LR+PV +CELG LYNKD +I  LL++   P    H+R LKD+VE KLT NP++EK      D+  D  + A F+CP+   EMNG + F  L   G V+SE+A K V      +   P+ EDDI+ L  TD+E     R++ A REKA+L KK
Sbjct:   71 CALSQEILRQPVVSCELGRLYNKDAVIEHLLDKTQTPELAKHVRNLKDVVELKLTENPAYEKISNHKGDKYMDH-QMAPFICPIVNMEMNGKYKFCYLRRCGCVLSERAFKLVKSETCHKCGKPYNEDDIITLNGTDDEVVLLRRKMDASREKAKLLKK 228          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: UPI001E671F51 (replication termination factor 2-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E671F51)

HSP 1 Score: 123 bits (308), Expect = 3.880e-30
Identity = 65/157 (41.40%), Postives = 99/157 (63.06%), Query Frame = 0
Query:    3 CAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDR----AFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKREKARLAKK 155
            C+IS   L+ PV ACELG +YNK+V+++ LL+R   P  +HIRGLKDI E  LT NP +  E      A+   + A ++CPVT  EMNG + F  + + G V+SE+A KEV      +   P+ E+D++ L P+ +E++    ++I++R KA++AKK
Sbjct:   37 CSISQTPLKTPVVACELGRMYNKEVVLTRLLDRSSEPGMSHIRGLKDIKELNLTSNPGYRHEGANKGDAYTDHQAAEYICPVTSLEMNGKYPFSFVWTCGCVVSERALKEVKSEVCHKCGQPYQEEDVIPLNPSVDEQDAVKARMISRRAKAKVAKK 193          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: A0A423SA55_PENVA (Replication termination factor 2 n=4 Tax=Penaeus TaxID=133894 RepID=A0A423SA55_PENVA)

HSP 1 Score: 116 bits (291), Expect = 1.100e-27
Identity = 59/149 (39.60%), Postives = 95/149 (63.76%), Query Frame = 0
Query:    3 CAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDR----AFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKR 147
            CA S   L+ P+ ACE+G LYNK+ +++ LL+R  + + +HI+GLKDI E  LTPNP F++E      A+   + A ++CPVT  EMNG + F  + S G V+SE+A KEV      +   P++++D+V L P++EE++     ++++R
Sbjct:   37 CAASQTRLKAPIVACEMGRLYNKEEVLTRLLDRSTDASMSHIKGLKDIKELNLTPNPGFKQEGANKGDAYTDHQAAEYICPVTSLEMNGKYRFSFIWSCGCVLSERALKEVKSEVCHKCGKPYSDEDVVPLNPSEEEQDAVKACMLSRR 185          
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Match: A0A8J5MPL7_HOMAM (Replication termination factor 2-like n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MPL7_HOMAM)

HSP 1 Score: 116 bits (291), Expect = 1.190e-27
Identity = 60/155 (38.71%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    3 CAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDIVECKLTPNPSFEKEDR----AFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWVMSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKREKARLA 153
            C+IS   L++P+ ACE+G +YNK+ +++ LL+R   P  +HI+GLKDI E  LTPNP +  E      A+   + A F+CPVT  EMNG + F  +   G V+SE+A KEV      +   P+ E+D++ L P++EE +    +++++R  A+ A
Sbjct:   37 CSISQTPLKKPIVACEIGRMYNKEEVLTRLLDRSAEPGMSHIKGLKDIKELNLTPNPGYIHEGANKGDAYTDHQAAEFICPVTSLEMNGKYHFSFVWRCGCVVSERALKEVKSDVCHKCGQPYQEEDVIPLNPSEEEHDAVKARMLSRRALAKAA 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19257.6166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ42_ECTSI5.910e-10298.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1S5E2_HETAK7.450e-4557.14Replication termination factor 2 n=1 Tax=Heterosig... [more]
A0A836CNB3_9STRA2.310e-4452.82Rtf2 RING-finger-domain-containing protein n=1 Tax... [more]
A0A7S3H2A3_9STRA3.230e-4048.30Replication termination factor 2 n=1 Tax=Spumella ... [more]
W7TG44_9STRA2.500e-3946.06Replication termination factor 2 n=3 Tax=Monodopsi... [more]
A0A7S2RH24_9STRA7.930e-3139.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
T1J2E7_STRMM3.780e-3045.28Replication termination factor 2 n=1 Tax=Strigamia... [more]
UPI001E671F513.880e-3041.40replication termination factor 2-like n=1 Tax=Proc... [more]
A0A423SA55_PENVA1.100e-2739.60Replication termination factor 2 n=4 Tax=Penaeus T... [more]
A0A8J5MPL7_HOMAM1.190e-2738.71Replication termination factor 2-like n=1 Tax=Homa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027799Replication termination factor 2, RING-fingerPFAMPF04641Rtf2coord: 2..228
e-value: 1.0E-47
score: 162.8
IPR006735Replication termination factor 2PANTHERPTHR12775PROTEIN C20ORF43 HOMOLOGcoord: 2..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19257contigEcto-sp13_S_contig19257:3..2681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19257.6166.1mRNA_Ecto-sp13_S_contig19257.6166.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19257 3..2681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19257.6166.1 ID=prot_Ecto-sp13_S_contig19257.6166.1|Name=mRNA_Ecto-sp13_S_contig19257.6166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
QVCAISNEVLREPVAACELGYLYNKDVLISGLLNRDLNPAFNHIRGLKDI
VECKLTPNPSFEKEDRAFDGPEPARFMCPVTLQEMNGSHAFVVLMSTGWV
MSEKATKEVGIAGLQEEYGPFTEDDIVGLAPTDEERETRTRQLIAKREKA
RLAKKSSKKSARREKAAASAKAGATKPSSSPPSAGASMVGGQPSKPSAST
GDDAQEDAAGGESKKGKKRRRALEKEAASAAAVAANGASAGPNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027799Rtf2_RING-finger
IPR006735Rtf2