prot_Ecto-sp13_S_contig1924.6160.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1924.6160.1
Unique Nameprot_Ecto-sp13_S_contig1924.6160.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1924.6160.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 7.700e-31
Identity = 73/100 (73.00%), Postives = 79/100 (79.00%), Query Frame = 0 
Query:    1 LPVPKATGPLF--LIVPPLGQDETSGSRSVAGEGRSNSGSRSRSSKTGTDVSRGRHSLLEEGQSEAAASSSTRTDVELFERGSLLAAGHVRVLLIIYGIY 98
            LPVP+A G  F  L+VPPLGQD+ SGSRS AG  RSN GS S SS  GT+VSRGRHSLL EGQ E A SSST TDVE F RGSLLAAGHVRVLL++YGIY
Sbjct:  157 LPVPEAAGVQFTSLVVPPLGQDKESGSRSAAGGERSNDGSGSTSSTNGTEVSRGRHSLLAEGQGECATSSSTWTDVEPFNRGSLLAAGHVRVLLVVYGIY 256
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BLAST of mRNA_Ecto-sp13_S_contig1924.6160.1 vs. uniprot
Match: A0A6H5JCE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE3_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.420e-25
Identity = 65/88 (73.86%), Postives = 68/88 (77.27%), Query Frame = 0 
Query:   12 LIVPPLGQDETSGSRSVAGEGRSNSGSRSRSSKTGTDVSRGRHSLLEEGQSEAAASSSTRTDVELFERGSLLAAGHVRVLLIIYGIYM 99
            L VPPLG+D+ SGS S AGE RS S S S SS  GT+VSRGRHSLLEEGQ E A S ST TDVE F RGSLL AGHVRVLLIIYG YM
Sbjct:  124 LAVPPLGKDKESGSCSAAGEERSKSCSGSTSSTNGTEVSRGRHSLLEEGQGECATSCSTWTDVEPFNRGSLLGAGHVRVLLIIYGTYM 211
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BLAST of mRNA_Ecto-sp13_S_contig1924.6160.1 vs. uniprot
Match: D8LFV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV4_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.830e-16
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0 
Query:   42 SSKTGTDVSRGRHSLLEEGQSEAAASSSTRTDVELFERGSLLAAGHVRVLLIIYGIYM 99
            SS  GT+VS G HSLLEEGQSEAAASSST TD+E F+RGSLLAAGHVRVLL+IYGI M
Sbjct:    2 SSTNGTEVSLGCHSLLEEGQSEAAASSSTWTDLEPFKRGSLLAAGHVRVLLVIYGICM 59
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1924.6160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZQ3_9PHAE7.700e-3173.00MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCE3_9PHAE1.420e-2573.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFV4_ECTSI1.830e-1681.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1924contigEcto-sp13_S_contig1924:12805..13711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1924.6160.1mRNA_Ecto-sp13_S_contig1924.6160.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1924 12805..13711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1924.6160.1 ID=prot_Ecto-sp13_S_contig1924.6160.1|Name=mRNA_Ecto-sp13_S_contig1924.6160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
LPVPKATGPLFLIVPPLGQDETSGSRSVAGEGRSNSGSRSRSSKTGTDVS
RGRHSLLEEGQSEAAASSSTRTDVELFERGSLLAAGHVRVLLIIYGIYM
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