mRNA_Ecto-sp13_S_contig19238.6156.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: D7FWP1_ECTSI (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP1_ECTSI) HSP 1 Score: 205 bits (521), Expect = 1.810e-65 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 1
Query: 1 GVVWNAGGEMQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLKCDASQTQLSFHIPPWNSV 300
GVVWNA GEMQSCLFCDFANHTKEKELLYEDDLVIAFSP+KPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLKCDASQTQLSFHIPPWNSV
Sbjct: 38 GVVWNARGEMQSCLFCDFANHTKEKELLYEDDLVIAFSPLKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLKCDASQTQLSFHIPPWNSV 137
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: UPI00077B98B9 (histidine triad nucleotide-binding protein 3 isoform X1 n=2 Tax=Tetranychus urticae TaxID=32264 RepID=UPI00077B98B9) HSP 1 Score: 93.2 bits (230), Expect = 1.110e-21 Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 1 GVVWNAGGEMQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK---CDASQTQLSFHIPPWNSV 300
G+ N + +C+FC + E + YEDD +AF + PA+ HIL++PKRHI + L D P+++RMK++A+ L++ D++ T+L FH PP+NS+
Sbjct: 27 GMARNINPVINNCIFCSIVSRKAEATIKYEDDAYLAFKDIYPASDTHILIIPKRHIKDIKSLTTDDLPIIERMKDIAINLIRENALDSNDTRLGFHKPPFNSI 129
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: A0A197JVJ0_9FUNG (HIT domain-containing protein (Fragment) n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JVJ0_9FUNG) HSP 1 Score: 84.3 bits (207), Expect = 9.840e-19 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 37 CLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK---CDASQTQLSFHIPPWNSVGKCCFRVTGG 330
C+FC A+ + +L+Y+DD + AF+ + PAA+ HIL+VP H+ +V + PLL++M + + LLK D Q++L FH+PP+N+V V GG
Sbjct: 14 CIFCAIADGSTPTKLVYKDDEIAAFNDINPAAETHILIVPVDHVKSVKTMTADHIPLLEKMHQKGIDLLKERGHDPEQSRLGFHVPPFNTVDHLHLHVVGG 114
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: K5WFJ8_PHACS (HIT domain-containing protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5WFJ8_PHACS) HSP 1 Score: 84.0 bits (206), Expect = 5.560e-18 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 13 NAGGEMQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLL---KCDASQTQLSFHIPPWNSVGKCCFRVTGGP 333
+ G + C+FCD + K ++++ED+ I F+ PAAK H+LV+PKRH+ +V L +D P++ RM E+ LL A+ + FHIPP+NSV V G P
Sbjct: 27 DTGYRIPGCVFCDISRE-KGFDVVWEDETFIVFNDHSPAAKHHLLVIPKRHVESVKTLKPSDAPMIQRMSEIGHSLLGELSVPAASRMMGFHIPPFNSVDHLHLHVQGLP 135
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: A0A7J7BDH5_9COLE (HIT domain-containing protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7BDH5_9COLE) HSP 1 Score: 82.4 bits (202), Expect = 8.000e-18 Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 28 MQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK---CDASQTQLSFHIPPWNSV 300
M +C+FC+ + + + +YED+ +I F+ ++PAAK H L +PK+HI V L D P L+R+ + +LK C ++ FH+PP+NS+
Sbjct: 1 MSNCVFCNIVSGKQPTDFVYEDEEIIVFNDIRPAAKFHYLAIPKKHIQDVNSLTIEDIPFLERLIAIGKNVLKEAGCSIDDARIGFHVPPFNSI 94
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: U9TE69_RHIID (HIT domain-containing protein n=4 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TE69_RHIID) HSP 1 Score: 82.0 bits (201), Expect = 1.310e-17 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 31 QSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK---CDASQTQLSFHIPPWNSVGKCCFRVTGGP 333
Q C+FCD +K+++YED+ ++AF + PAAK H+L++P+ HI V L D PLL M + +LL S+ ++ FH+PP+NSV G P
Sbjct: 14 QDCVFCDLT----DKKIVYEDERIVAFHDISPAAKLHLLIIPRNHIDNVDSLTPNDAPLLKHMIDTGNQLLSESGYQLSERRVGFHVPPYNSVHHLHLHCIGLP 113
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: UPI000418CA46 (histidine triad nucleotide-binding protein n=2 Tax=Marinospirillum TaxID=64968 RepID=UPI000418CA46) HSP 1 Score: 80.5 bits (197), Expect = 2.390e-17 Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 28 MQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK 246
MQ C+FC A H +LYEDD VIAF+ + P A H+LV+PKRHI+T+ DL E D L+ R++ A KL K
Sbjct: 1 MQDCIFCKIAKHELPATVLYEDDQVIAFNDIDPKAPHHLLVIPKRHITTLNDLQEGDEALVGRLQVTAAKLAK 73
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: A0A6P8HG88_ACTTE (histidine triad nucleotide-binding protein 3-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HG88_ACTTE) HSP 1 Score: 80.5 bits (197), Expect = 5.370e-17 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 22 GEMQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLL---KCDASQTQLSFHIPPWNSV 300
G ++C+FC + KE ++ YED+ +AF ++PAAK H L++PK H L L+ +MKEVA K+L K D+ ++ FH PP+NS+
Sbjct: 7 GRKENCIFCKISAKEKEAQIAYEDEEFVAFPDIQPAAKYHYLIIPKVHYGNPKSLDGRQLELVQKMKEVAYKILEQEKVDSDDVRIGFHWPPFNSI 102
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: A0A6D2K589_9BRAS (HIT domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2K589_9BRAS) HSP 1 Score: 79.7 bits (195), Expect = 1.100e-16 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 22 GEMQSCLFCDFA-NHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLV--ETDTPLLDRMKEVAVKLLKCDASQT--QLSFHIPPWNSV 300
G Q+C+FC N T LL+ D+ V+AF +KPAA++H LV+PK HI TV DL + D L+ M V +LL+ DA Q+ + FH PP+NSV
Sbjct: 3 GANQACIFCQIVRNPTSTTRLLHNDEKVVAFQDIKPAAQRHYLVIPKEHIPTVRDLKRRDEDYSLVSHMLSVGQELLQKDAPQSIHRFGFHQPPFNSV 100
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Match: A0A5N4AHM2_PHOPY (HIT domain-containing protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4AHM2_PHOPY) HSP 1 Score: 80.5 bits (197), Expect = 1.390e-16 Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 37 CLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK---CDASQTQLSFHIPPWNSV 300
C+FC+ + EL+YED+ ++ F +KPAA+ H L V KRHI V +L D L++++ EV ++L+ D + ++ FH+PP+NS+
Sbjct: 53 CIFCNIISGKHPNELIYEDEELVIFKDIKPAAEHHYLAVTKRHIKNVNELTTNDKELVEKLMEVGKRVLQELGADVNDLRMGFHVPPFNSI 143 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19238.6156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19238.6156.1 >prot_Ecto-sp13_S_contig19238.6156.1 ID=prot_Ecto-sp13_S_contig19238.6156.1|Name=mRNA_Ecto-sp13_S_contig19238.6156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp MQSCLFCDFANHTKEKELLYEDDLVIAFSPVKPAAKQHILVVPKRHISTVback to top mRNA from alignment at Ecto-sp13_S_contig19238:283..615- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19238.6156.1 ID=mRNA_Ecto-sp13_S_contig19238.6156.1|Name=mRNA_Ecto-sp13_S_contig19238.6156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=333bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19238:283..615- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19238:283..615- >mRNA_Ecto-sp13_S_contig19238.6156.1 ID=mRNA_Ecto-sp13_S_contig19238.6156.1|Name=mRNA_Ecto-sp13_S_contig19238.6156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=306bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19238:283..615- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |