prot_Ecto-sp13_S_contig19215.6145.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19215.6145.1
Unique Nameprot_Ecto-sp13_S_contig19215.6145.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length164
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19215.6145.1 vs. uniprot
Match: A0A6H5KI06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI06_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.870e-33
Identity = 79/85 (92.94%), Postives = 80/85 (94.12%), Query Frame = 0 
Query:    1 MSLFMFSSPSASXXXXXXXXX-VVAYSVLWPLRRLRASEEATLDLLRSTAWAGATSVAARGAFVRGLRLPCSLQDRHEFPTGTHT 84
            MSLFMFSSPSAS  XXXXXXX V+AYSVLWPLRRLRASEEATLDLLRSTAWAGATSVAARGAFVRGLRLPCSL DRHEFP GTHT
Sbjct:  237 MSLFMFSSPSASVGXXXXXXXXVIAYSVLWPLRRLRASEEATLDLLRSTAWAGATSVAARGAFVRGLRLPCSL-DRHEFPAGTHT 320
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BLAST of mRNA_Ecto-sp13_S_contig19215.6145.1 vs. uniprot
Match: D7G2G7_ECTSI (Predicted: Tubulin-tyrosine ligase-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G7_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 4.300e-32
Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0 
Query:    1 MSLFMFSSPSASXXXXXXXXXVVAYSVLWPLRRLRASEEATLDLLRSTAWAGATSVAARGAFVRGLRLPCSLQDRHEFPTGTHT 84
            MSLFMFSS SA XXXXXXXXXVVAYSVLWPLRRLRASEEATLDLLRSTAWAGATSVAARGAFVRGLRLPCSL DRHEFP GT+T
Sbjct:  130 MSLFMFSSQSAXXXXXXXXXXVVAYSVLWPLRRLRASEEATLDLLRSTAWAGATSVAARGAFVRGLRLPCSL-DRHEFPAGTNT 212
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19215.6145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KI06_9PHAE4.870e-3392.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2G7_ECTSI4.300e-3294.05Predicted: Tubulin-tyrosine ligase-related protein... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19215contigEcto-sp13_S_contig19215:1135..1905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19215.6145.1mRNA_Ecto-sp13_S_contig19215.6145.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19215 1135..1908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19215.6145.1 ID=prot_Ecto-sp13_S_contig19215.6145.1|Name=mRNA_Ecto-sp13_S_contig19215.6145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
MSLFMFSSPSASGGGGGGGGGVVAYSVLWPLRRLRASEEATLDLLRSTAW
AGATSVAARGAFVRGLRLPCSLQDRHEFPTGTHTHHHTDHESLSLPRDRL
AKRHRRMNASANEYRARLAATATAATTATGTVTPVVPVAVQAPLPPPPLS
SGVGTAALSPPAGS
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