prot_Ecto-sp13_S_contig1921.6143.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1921.6143.1
Unique Name	prot_Ecto-sp13_S_contig1921.6143.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	640

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1921.6143.1 vs. uniprot
Match: A0A6H5JLQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ8_9PHAE)

HSP 1 Score: 953 bits (2463), Expect = 0.000e+0
Identity = 580/639 (90.77%), Postives = 592/639 (92.64%), Query Frame = 0

Query:    1 MESAADSTLPLSGKSSTHPRGKRGHGFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXETTRTGLDDLPCTSFLSDDDDDSEGLRDFDQIFHPAATGTSGAWPSGRELHGQQRHGGGGAVDHQHGDGGLLDDDNDSVLPALPSRSSTPGSPRGFLTSNSGNXXXXXXXXXXXXXXXXXGAGWVEDDFGSGASARRGGGRVGHASCDHRLATGGALENILPQNTDTTTHTKTTPAAVITSPEIQPGGSLAQQSRMSQTAAAAGGETAASGSSTPFLRESWLHVPVGDDDEIKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARALGDCGDCLVRGVGRAGALAKARTLEVGRAVKVQVEAGADACSRGQKAAVKAVDSVPQASVRVWLGRVALSIVVGIVLGSAATFCALRAATTKTGSVCAGADATSPWWSTGGVGDSVGAGGADQSFGDRLDKALLAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVYPSTSASQQPQPSSSSIPHGATPATDCAGGASGSAFCSTDGXXXXXXXDSVRANMADSVRRAKGFRDGGRQEYRRHCGGGGWVC 639
            MESAADS+LP +GKSSTHPRG+RG+GFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXX TTRTGL+D  CTSFLSDDDDDSEGLRDFDQIFHPAAT TSGA  SGREL+GQQRH GGGA DHQHGDGG+LDDDNDSVLPALPSRSSTPGSPRG+ TSNSGN                 GAGWVEDDFGSGASARRGGGRVGHASCDHRLATGGA EN LPQNTD TTHTKTTPAA ITSPEIQPGGS+AQQS  SQTAA AGGETAASGSSTPFLRESWLHVPVGDDDEIKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAA+ALGDCGDCLVRGVGRAGALAKAR LEVGRAVKV V+AGADACSRGQKAAVKAVDSVPQA VRVWLGRVALSIVVGIVLGSAATFCALRAATTK GSVCAGADATSPWWSTGG GDSVGAGGADQSFGDRLDKAL AARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPV PS SASQQPQPSSSSIPHGATPATDCAGGASGS FCS D  XXXXXXDSVRANMA+SVRR KGFRDGGRQEYRRHCGGGGWVC
Sbjct:    1 MESAADSSLPPAGKSSTHPRGRRGNGFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXXTTRTGLEDFACTSFLSDDDDDSEGLRDFDQIFHPAATSTSGARSSGRELYGQQRHRGGGAADHQHGDGGVLDDDNDSVLPALPSRSSTPGSPRGYSTSNSGNSSSSKPYFIAPAASAA-GAGWVEDDFGSGASARRGGGRVGHASCDHRLATGGAPENNLPQNTDITTHTKTTPAAGITSPEIQPGGSVAQQSGTSQTAATAGGETAASGSSTPFLRESWLHVPVGDDDEIKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQALGDCGDCLVRGVGRAGALAKARALEVGRAVKVHVDAGADACSRGQKAAVKAVDSVPQAPVRVWLGRVALSIVVGIVLGSAATFCALRAATTKMGSVCAGADATSPWWSTGGAGDSVGAGGADQSFGDRLDKALFAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVNPSASASQQPQPSSSSIPHGATPATDCAGGASGSTFCSADSGXXXXXXDSVRANMAESVRRVKGFRDGGRQEYRRHCGGGGWVC 638

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BLAST of mRNA_Ecto-sp13_S_contig1921.6143.1 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI)

HSP 1 Score: 511 bits (1317), Expect = 4.600e-174
Identity = 341/399 (85.46%), Postives = 353/399 (88.47%), Query Frame = 0

Query:    9 LPLSGKSSTHPRGKRGHGFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXETTRTGLDDLPCTSFLSDDDDDSEGLRDFDQIFHPAATGTSGAWPSGRELHGQQRHGGGGAVDHQHGDGGLLDDDNDSVLPALPSRSSTPGSPRGFLTSNSGNXXXXXXXXXXXXXXXXXGAGWVEDDFGSGASARRGGGRVGHASCDHRLATGGALENILPQNTDTTTHTKTTP---AAVITSPEIQPGGSLAQQSRMSQTAAAAGGE-TAASGSSTPFLRESWLHVPVGDDDEIKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARALGDCGDCLVRGVGRAGALAKARTLEVGRAVKVQVEAGADACSRGQKAAVKAVDSVPQA 403
            LP+  +SSTHP+G+RG+GFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXX   RTGLDDL CTSFLSDDDDDSEGLRDFDQIFHPAAT TSGAW SGREL+GQQRH GGGAVDHQHGDGG  DDDNDSVLPALPSRSSTPGSPRG+LTSNSGN                 GAGWVE+DFGSGA ARRGGGRVGHASCDHRLATGGALEN L QNTDTTTHTK T    AA ITSPEIQPGGSL QQS  S+TAAAAGGE  AASGSSTPFLRESWLHVP+GD+DEIKSE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAA+ALGDCGDCLVRGVGRAGALAKAR LE GRAVKVQVEAGADACSRGQKAAVKAVDSVPQA
Sbjct:   48 LPV--QSSTHPKGRRGNGFRDMEMSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXXXXRTGLDDLACTSFLSDDDDDSEGLRDFDQIFHPAATSTSGAWSSGRELYGQQRHRGGGAVDHQHGDGGAFDDDNDSVLPALPSRSSTPGSPRGYLTSNSGNSSSSKPYFVASAASAA-GAGWVEEDFGSGAGARRGGGRVGHASCDHRLATGGALENNLTQNTDTTTHTKATAPAAAAAITSPEIQPGGSLTQQSGTSRTAAAAGGEIAAASGSSTPFLRESWLHVPIGDEDEIKSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQALGDCGDCLVRGVGRAGALAKARALEFGRAVKVQVEAGADACSRGQKAAVKAVDSVPQA 443

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BLAST of mRNA_Ecto-sp13_S_contig1921.6143.1 vs. uniprot
Match: D7G052_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G052_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 2.670e-127
Identity = 209/220 (95.00%), Postives = 212/220 (96.36%), Query Frame = 0

Query:  422 LGSAATFCALRAATTKTGSVCAGADATSPWWSTGGVGDSVGAGGADQSFGDRLDKALLAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVYPSTSASQQPQPSSSSIPHGATPATDCAGGASGSAFCSTDGXXXXXXX--DSVRANMADSVRRAKGFRDGGRQEYRRHCGGGGWVC 639
            LGSAATFCALRAATTKTGSVCAGADATSPWWSTGG GDSVGAGGADQSFGDRLDKAL AARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPV PS S+SQQPQPSSSS+PHGATPATDCAGGASGSAFCS D XXXXXXX  DSVRANMA+SVRRAKGFRDGGRQEYRRHCGGGGWVC
Sbjct:    2 LGSAATFCALRAATTKTGSVCAGADATSPWWSTGGAGDSVGAGGADQSFGDRLDKALFAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVNPSASSSQQPQPSSSSVPHGATPATDCAGGASGSAFCSADSXXXXXXXXXDSVRANMAESVRRAKGFRDGGRQEYRRHCGGGGWVC 221

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1921.6143.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1921.6143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JLQ8_9PHAE	0.000e+0	90.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G053_ECTSI	4.600e-174	85.46	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G052_ECTSI	2.670e-127	95.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 408..431
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..407
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 432..639

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1921	contig	Ecto-sp13_S_contig1921:6152..9655 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1921.6143.1	mRNA_Ecto-sp13_S_contig1921.6143.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1921 3528..9919 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1921.6143.1 ID=prot_Ecto-sp13_S_contig1921.6143.1|Name=mRNA_Ecto-sp13_S_contig1921.6143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=640bp
MESAADSTLPLSGKSSTHPRGKRGHGFRDMEMSVDSQSFVNLGQLMGSRH
GGGGASSAAASSGGETTRTGLDDLPCTSFLSDDDDDSEGLRDFDQIFHPA
ATGTSGAWPSGRELHGQQRHGGGGAVDHQHGDGGLLDDDNDSVLPALPSR
SSTPGSPRGFLTSNSGNSSSSSKPHSVTSAASAAGAGWVEDDFGSGASAR
RGGGRVGHASCDHRLATGGALENILPQNTDTTTHTKTTPAAVITSPEIQP
GGSLAQQSRMSQTAAAAGGETAASGSSTPFLRESWLHVPVGDDDEIKSEA
AASSDMDDDDSDAEEAGGAAFSSHRHRYSEAAAAAAGARRAAARALGDCG
DCLVRGVGRAGALAKARTLEVGRAVKVQVEAGADACSRGQKAAVKAVDSV
PQASVRVWLGRVALSIVVGIVLGSAATFCALRAATTKTGSVCAGADATSP
WWSTGGVGDSVGAGGADQSFGDRLDKALLAARAGEAAAQQGLLEDMRNIL
AATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAP
PTAPVYPSTSASQQPQPSSSSIPHGATPATDCAGGASGSAFCSTDGGGGG
GGGDSVRANMADSVRRAKGFRDGGRQEYRRHCGGGGWVC*