prot_Ecto-sp13_S_contig192.6136.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig192.6136.1
Unique Nameprot_Ecto-sp13_S_contig192.6136.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length310
Homology
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BLAST of mRNA_Ecto-sp13_S_contig192.6136.1 vs. uniprot
Match: D7FTT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT8_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 5.920e-142
Identity = 238/265 (89.81%), Postives = 248/265 (93.58%), Query Frame = 0 
Query:    1 MQYLGCCFWLGNPPGESLGVALDAAGGVVFMAGSISEPDEDPDLYIAAFEIATGQVLWTWTHGTIYSDILTDLAFDEENGVLYACGYTRGNFSYALDADPAPEVKLQDMVVLALDPSTQETIWLKTYTSGPLVDRADFAFTITFDRNGVLHVGGTTRGTGFDTDGSAGEDDPDTRPRLLSSRGCNPGANSGSLYPGTHCSTFHSNTNRNPYXXXXXXXXXXXXXXXXXFPSTHCTPLYXXXXXXXXXXXXXXXTRHSSANRSPFY 265
            M+YLGCC WLGNPPG++LGVALD AGG+VFMAGS+SEPDEDPDLY+AAFEIATGQVLWTWTHGTIYSDILTDL FDEENGV+YACGYTRG+FSYALDADPAPEVKLQDMVVLALDPSTQETIWLKTYTSGPLVDRADFAFTITFDRNGVLHVGGTTRGTGFDTDGSAGEDDPDTRPRLLSSRGCNP ANSGSLYPGTH STF+S       XXXXXXXXXXXXXXXXX PSTHC PL XXXXXXXXXXXXX  TR+SSANRSPFY
Sbjct:    1 MRYLGCCSWLGNPPGQALGVALDVAGGMVFMAGSMSEPDEDPDLYMAAFEIATGQVLWTWTHGTIYSDILTDLVFDEENGVIYACGYTRGDFSYALDADPAPEVKLQDMVVLALDPSTQETIWLKTYTSGPLVDRADFAFTITFDRNGVLHVGGTTRGTGFDTDGSAGEDDPDTRPRLLSSRGCNPSANSGSLYPGTHRSTFYSXXXXXXXXXXXXXXXXXXXXXXXXXPSTHCIPLXXXXXXXXXXXXXXYNTRYSSANRSPFY 265
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BLAST of mRNA_Ecto-sp13_S_contig192.6136.1 vs. uniprot
Match: A0A6H5L1V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V8_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 1.940e-102
Identity = 218/397 (54.91%), Postives = 229/397 (57.68%), Query Frame = 0 
Query:   15 GESLGVALDAAGGVVFMAGSISEPDEDPDLYIAAFEIATGQVLWTWTHGTIYSDILTDLAFDEENGVLYACGYTRGNFSYALDADPAPEVKLQDMVVLALDPSTQETIWLKTYTSGPLVDRADFAFTITFDRNGVLHVGGTTRGTGFDTDGSAGEDDPDTRPRLL----------SSRG----------------------------------------------------------------------------------------CNPG------------------------------------------------ANSGSLYPGTHCSTFHSNTNRNPYXXXXXXXXXXXXXXXXXFPSTHCTPLYXXXXXXXXXXXXXXXTRHSSANRSPFY 265
            GE+LGVALD AGG+VFMAGS+SEPDE+PDLYIAAFEIATGQV+WTWTHGTIYSD+LTD+AFDEENGVLYACGYTRG+FSYALDADPAPEVKLQDMVVLA DPSTQETIWLKTYTSGPLVDR DFAFTITFDRNGVLHVGG TRGTGFDTDGSAGEDDPDT+PRLL          +S G                                                                                          PG                                                ANSGSLYPGTHCSTFHSNTNR+PYXXXXXXXX         FPSTHC PLYXXXXXXXXXXXXXXX     ANRSPFY
Sbjct:   23 GEALGVALDPAGGMVFMAGSMSEPDEEPDLYIAAFEIATGQVVWTWTHGTIYSDVLTDIAFDEENGVLYACGYTRGDFSYALDADPAPEVKLQDMVVLAFDPSTQETIWLKTYTSGPLVDREDFAFTITFDRNGVLHVGGATRGTGFDTDGSAGEDDPDTKPRLLRFVFVSMSLDASDGETLVSYQSLNYRTSRLLSSVMVPDTTEGDLYMGGHDGDTFFGMVYRRERPTLPPTPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDATPGRLRTLLPTPFSCEAPLQRAQQLFFLHHTTYPFPLPTSFAPFTPPAKRSANSGSLYPGTHCSTFHSNTNRHPYXXXXXXXXCYTSANHSSFPSTHCIPLYXXXXXXXXXXXXXXXXXXXXANRSPFY 419
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig192.6136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTT8_ECTSI5.920e-14289.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V8_9PHAE1.940e-10254.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..175
e-value: 4.5E-6
score: 28.0
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 24..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig192contigEcto-sp13_S_contig192:21061..24520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig192.6136.1mRNA_Ecto-sp13_S_contig192.6136.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig192 21061..25165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig192.6136.1 ID=prot_Ecto-sp13_S_contig192.6136.1|Name=mRNA_Ecto-sp13_S_contig192.6136.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=310bp
MQYLGCCFWLGNPPGESLGVALDAAGGVVFMAGSISEPDEDPDLYIAAFE
IATGQVLWTWTHGTIYSDILTDLAFDEENGVLYACGYTRGNFSYALDADP
APEVKLQDMVVLALDPSTQETIWLKTYTSGPLVDRADFAFTITFDRNGVL
HVGGTTRGTGFDTDGSAGEDDPDTRPRLLSSRGCNPGANSGSLYPGTHCS
TFHSNTNRNPYHPGTHCSACYTSANLSPFPSTHCTPLYPCTHCTPLYPSA
NYNTRHSSANRSPFYPSTNFFAFFPSTHRGPVYPNTHYIAPYASANRSCL
HPSTNFSAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam