mRNA_Ecto-sp13_S_contig19142.6108.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 806 bits (2081), Expect = 2.980e-291 Identity = 448/460 (97.39%), Postives = 456/460 (99.13%), Query Frame = 1
Query: 1 YLENGACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAME 1380
YLENGACVTLTDIYESR D+TG+KGPLYPFDETTLDISDTVTGSWYLES+LYITEGSRLVVQGLSKGGDCDHLLLASSPEKFIN+RAHGGELMLDGTHVESWDLAAGTVDE+NEDGRSYLSAISEVITDP ETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGI+YKVRGFC DLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMH NIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSL+SDN+VVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAME
Sbjct: 75 YLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAME 534
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE) HSP 1 Score: 790 bits (2040), Expect = 2.300e-285 Identity = 447/480 (93.12%), Postives = 455/480 (94.79%), Query Frame = 1
Query: 1 YLENGACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNH--------------------LGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAME 1380
YLENGACVTLTDIYESRSD++G+KGPLYPFDET LDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDE+NEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVN LGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMH NIGYGFDPHDDSDY+TIHNNEV XXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYG+KNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGR RNNHIFDNSL+SDNQVVKMLNSDDTAFEGNVVYGRVSRFK+SFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAME
Sbjct: 35 YLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAME 514
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 4.220e-204 Identity = 333/452 (73.67%), Postives = 378/452 (83.63%), Query Frame = 1
Query: 1 YLENGACVTLTDIYESRSDN-TG-SKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIE 1344
YLENGAC T+TDIYESR D TG +KGP+YPFDETT I++ VTGSWYL SSLY+TEG+RLVVQGLSKGGDCDHLLLASS EKFINVRA+GGE+MLDGTHVESWDL GTVDE+ +DGRSYLSAISEVI +P C+G A NDMGEARMDIIDSE+NHLG Y+SESYGI+YKVRGFC DLSNPELF++V VTGDILGS IH YFGHYSYGHQGGNWS+N +HDN+GYGFDPHDDSDY+TI NN XXXXXXXXXXXXXXXXXXXXXXXXXXXGH+ +AG+ TGN XXXXXXXXXX MDSGVA+YESS C +S N + NKNGIRMS+GS++NL +EN I+ING D +YAIYLY+GND P V SDGRPRNN +FDNSL+SDN VV N+DD EGN ++GR SRF DSFNTLW N V D +H++KLE SCFDPESD++
Sbjct: 65 YLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPD-VHEFKLEDGSCFDPESDMD 515
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 349 bits (895), Expect = 3.590e-112 Identity = 204/459 (44.44%), Postives = 266/459 (57.95%), Query Frame = 1
Query: 1 YLEN------GACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV-SDGRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVY-----GRVSRFKDSFNTLWKSNF-VEDGIHDYKLELNSCFDPESD 1338
YLE+ G C TL I+ESR+ K PLY D + D+S+T TG+W L LY+ +G L V G +GGD D L L S+ E +IN+RAHGG L GT V SWD + + DED DGRSY+SA+SE++TD ETC+G AKN MGEARMDI +SE+ +LG+ DSESYG+++KVRGFC D SNPE+FD V+V G++ SDIH FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G T D+G+A+ ES VS+N NK G+RMS+G +DN+ EN I N +KY Y Y G+D PDV S GR +NN NS + +K+ +D T F NV G V RF D+ N++ + N +++G + K+ +SCFD ESD
Sbjct: 61 YLESADGETRGGCATLGQIWESRA----GKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNN---SKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 340 bits (873), Expect = 6.380e-109 Identity = 199/449 (44.32%), Postives = 257/449 (57.24%), Query Frame = 1
Query: 13 GACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV-SDGRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVY-----GRVSRFKDSFNTLWKSNF-VEDGIHDYKLELNSCFDPESD 1338
G CVTL I+ESR+ KGPLY D + ++S + TG+W L LY+ +G L V G GGD D L L S+ E FIN+RAHGG L T V SWD + + DED DGRSY+SAISE+ITD ETC+G AKN MGEARMDI SE+ +LG++DSESYG+++KVRGFC D SNPE+FD V+V G++ SDIH FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G T D+G+A+ ES VS+N NK G+R S+G +DN+ N I N A+Y Y Y G D PDV S GR +NN NS + +K+ +D T F NV G V RF ++ L + N ++DG + K++ ++CFD E+D
Sbjct: 67 GGCVTLGQIWESRA----GKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNN---AEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 326 bits (835), Expect = 2.440e-103 Identity = 211/456 (46.27%), Postives = 278/456 (60.96%), Query Frame = 1
Query: 1 YLEN------GACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVYGRVS-RFKDSFNTLWKSNFVEDGIHDYKLEL--NSCFDPESD 1338
YLE+ G CVTL I+E + + PLY D + DISD+ TG+W L L++ +G L V G S GGD D L L S+ + FIN+RAHGG L T V +WD + D D EDGRSY+SA+SEVITD ++TC+G AKN+MGEARMDI DSE+ +LG++ SESYG+++KVRGFC D SN +LF+ V+V G+I SDIH N FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G + XXXXXXXXXXXXXXX D+G+A+ ES VSDN NK GIR S+GS N+ + N +I+G +Y+ Y Y G+D PDV D GR ++N +N++I + +K+L++D T F N + RF D+ TL N G++ KL++ + FD SD
Sbjct: 54 YLESADSKTRGGCVTLEQIWEHQR----GEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQ-------GNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNN--VISGS-TRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNI---GLNMSKLKVVNGASFDASSD 492
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 310 bits (795), Expect = 3.180e-96 Identity = 182/451 (40.35%), Postives = 251/451 (55.65%), Query Frame = 1
Query: 7 ENGACVTLTDIYESRSDNT--GSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEK-------FINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVY--GRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCF 1323
E G CVT+ I+E+R T G+K PLY D + + SD +TG+W LE LY+ +G L V G GG D L L S+P +IN+RAHGG L + T V WD + D D DGRSY+SA+SE++ DPT+TC+G AKN MGEARMDI++SE+ ++G++DSESYG+++KVRGFC D SNPE+FD V+V G+I S++H F Y+YGHQ G+W N +H N GYG+DPHDDSD++TIH+N V G+I G T D+G+A+ ESS +S N GNK GIRMS+G DN + N + ++YAIY YQG+D +V GR ++N N+++ Q +K+ SD T NV Y G V + N + + +ED + +L +CF
Sbjct: 141 ERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQ-------GNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNT---SQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDAT-EVELVEPACF 580
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 305 bits (781), Expect = 1.380e-95 Identity = 182/446 (40.81%), Postives = 252/446 (56.50%), Query Frame = 1
Query: 13 GACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVYGRVS-RFKDSFNTLWKSNFVEDGIHD--YKLELNSCFDPESD 1338
G CVTL I+E + D + PLY D + D+S + TG+W L +Y+ +G L V G+S GGD D L L S+ + FI++RA+GG L T V +WD + D+D DGRSY+SA+SEVITD +TC+G AKN+MGEARMDI +SE+ +LG++ +E+YG+++KVRGFC D NPELFD V+V G+I SDIH N FG Y+YGHQ G+W NKMHDN GYGFDPHDDSD++TIH+NEV G+ G D+G+A+ ES VSDN NK G+R+S+G N+ +N +I G A++ + Y G D P+V D GR ++N +N++I + + + +D T F N + RF D+ TL N G+ D K++ + FD SD
Sbjct: 38 GGCVTLEQIWEQQVDGS----PLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQ-------GNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKN--VITGS-AEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNT---GLADSTLKVDRGATFDESSD 466
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 306 bits (783), Expect = 1.470e-95 Identity = 195/454 (42.95%), Postives = 254/454 (55.95%), Query Frame = 1
Query: 1 YLEN------GACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSD-GRPRNNHIFDNSLISDNQVVKMLNSDDTAFEGNVVYG-RVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESD 1338
YLE+ G CVTL DI+ + PLY ++ D+S ++TG+W L SLY+ +G L V G S GG D L L S+ + FIN+RAHGG L T V +WD + V D+ GRSY+SA+SEVITD + CDG AK +MGEARMDI DSE+ +LG++ SESYG+++KVRG C DLSN E+FD+V+V G+I SDIH NYFG Y+YGH+ G+W NKMH N YGFDPHDDSD++TIH+NEV XXXXXX G D+G+AL E+ VS+NK NK GIRMS+G +DN+ +NDI + +KY +Y YQG+D P V D GR ++ + VK+ +D T F N + RF+D TL N G K+ SCFD +SD
Sbjct: 54 YLESADGNTRGGCVTLEDIWR----DLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXX-------XXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGS---SKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGAS-LKVTDGSCFDKKSD 492
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 313 bits (803), Expect = 1.550e-94 Identity = 187/436 (42.89%), Postives = 247/436 (56.65%), Query Frame = 1
Query: 1 YLENGACVTLTDIYESR-SDNTGS-KGPLYPFDE--TTLDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASS-PEKFINVRAHGGELMLDGTHVESWDLAAGTVDEDNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHDNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVSDGRPRNNHIFDNSLISDNQV-VKMLNSDDTAFEGNVVYG-RVSRFKDSFNTLWKSNFVEDG 1287
Y E C T+TD+Y R ++N GS KGP+Y D+ T LDI +T +W L + LYIT G +G S GGDC+ L + S+ + F VR HGG L + T V SWD E E+GRS+L+ +SE +T + C+G AKN+MGE RMDII+SE+ +LG++DSESYG+++KVRGFC DLSNPE+F+ +V GD+ GSDIH Y+GHYSYGHQGG W++NKMHDN YGFDPHDDSDY+TI NEV + + G D+G+A+ ES + N I G K GIRMSLGS +N +Y+N ++Y +Y Y+G+D PDVSDGRP N + N L+ D + VK+ DD F N F +S NT+W N + DG
Sbjct: 443 YAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTG--DDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFEN------EVRDGGAAAAGIFLHRSSDGAAVFDNTITNM-QDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFT---DISQYGLYTYEGSDEPDVSDGRPSGNVLALN-LVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG 865 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19142.6108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19142.6108.1 >prot_Ecto-sp13_S_contig19142.6108.1 ID=prot_Ecto-sp13_S_contig19142.6108.1|Name=mRNA_Ecto-sp13_S_contig19142.6108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=460bp YLENGACVTLTDIYESRSDNTGSKGPLYPFDETTLDISDTVTGSWYLESSback to top mRNA from alignment at Ecto-sp13_S_contig19142:3..2977- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19142.6108.1 ID=mRNA_Ecto-sp13_S_contig19142.6108.1|Name=mRNA_Ecto-sp13_S_contig19142.6108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19142:3..2977- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19142:3..2977- >mRNA_Ecto-sp13_S_contig19142.6108.1 ID=mRNA_Ecto-sp13_S_contig19142.6108.1|Name=mRNA_Ecto-sp13_S_contig19142.6108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1380bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19142:3..2977- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |