mRNA_Ecto-sp13_S_contig1912.6094.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A6H5K366_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K366_9PHAE) HSP 1 Score: 266 bits (680), Expect = 1.210e-78 Identity = 314/357 (87.96%), Postives = 315/357 (88.24%), Query Frame = 1
Query: 1 METWRDMEVAVPQGDFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQQWQIQAQAEQRAVGRARVSXXXXXXXXXXXXXXXXXXXXXXXSRTRYAIPHSAGGTAAPRAVAAGQDGAGGLVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGGGGR-------SSWSRLDRAAALRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRTGSS 1050
METWRDMEVAVPQGDFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLQQWQIQAQAEQRA XXXXXXXXXXXXXXXXXXXXXXXSRTRYAIPH+ GGTAAPRAVAAGQ GAGGLV XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX SSWSRLDRAAALRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHI QCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRTGSS
Sbjct: 1 METWRDMEVAVPQGDFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PLQQWQIQAQAEQRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTRYAIPHTTGGTAAPRAVAAGQGGAGGLVGXXXXXXXXXXXXXXXXGYVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEQGLPVQQXXXXXXXXXXXXXXXXXXSSWSRLDRAAALRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIVQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRTGSS 356
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: D7FIB6_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB6_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.560e-27 Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 1
Query: 889 MDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRTGSS 1050
MDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRT SS
Sbjct: 1 MDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLGRTESS 54
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A7S2ME95_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ME95_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.190e-20 Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 766 QQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISR 1008
QQ+RLLLLRHAS CPF +G+CP + HC +K LW+HI C + C+VPHC SSR+V+ HY+KC++ C++C PVR + R
Sbjct: 327 QQQRLLLLRHASTCPF-GDGRCPKTKHCGAMKRLWKHIVDCKNGECLVPHCVSSRYVLSHYYKCRDMGCNVCVPVRDAVRR 406
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A2R5G0C5_9STRA (Histone acetyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0C5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.350e-19 Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 721 RSSWSRLDRAAALRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQ 1023
RSS S+ D+ L+Q+Q+RLLLLRHASRC EG C + C +K LW+HI++C D C PHC SSR+V+ HYH+C + C +C PVR I + +R++Q
Sbjct: 231 RSSTSQHDKDQILKQRQQRLLLLRHASRCQ-NPEGTCKVTELCARMKSLWKHISKCKDPRCPEPHCVSSRYVLSHYHRCVKEDCPVCKPVRIISANQRNQQ 330
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: K0SP97_THAOC (Histone acetyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SP97_THAOC) HSP 1 Score: 105 bits (262), Expect = 1.670e-19 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 757 LRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLG 1035
+R +Q+RLLLL H+S+CP+ E+G+C +P+C +K LW+H+A+C D C VPHC SSR ++ HY KCK+P C C PVR + + + R +G
Sbjct: 415 IRHKQQRLLLLHHSSKCPY-EDGKCKVTPYCGEMKKLWKHMARCTDNECRVPHCFSSRSILSHYRKCKDPMCPACRPVRETVRKTQKGSRGMG 506
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A7S2E988_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E988_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.160e-19 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 766 QQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISR 1008
QQ+RLLLL HA CP+ + +CP + HC +K LW+HI C D C+VPHC SSR+V+ HYHKC++ C +C PVR II R
Sbjct: 91 QQQRLLLLYHAYSCPY-GDNRCPKTEHCGAMKSLWKHIVNCKDRECLVPHCVSSRYVLSHYHKCRDIACDVCIPVRNIIRR 170
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A7S4QMF2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMF2_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.900e-19 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 766 QQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISR 1008
QQ+RLLLL HA CP+ + +CP + HC +K LW+HI C D C+VPHC SSR+V+ HYHKC++ C +C PVR II R
Sbjct: 235 QQQRLLLLYHAYSCPY-GDNRCPKTEHCGAMKSLWKHIVNCKDRECLVPHCVSSRYVLSHYHKCRDIACDVCIPVRNIIRR 314
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A7S3QH66_9STRA (Histone acetyltransferase (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QH66_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.880e-18 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 769 QERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISR 1008
Q+RLLLLRHAS+C E+G+C +PHC +K LW HI+ C C V HC SSR+V+ HY KCK+ KC C PVRA I +
Sbjct: 584 QQRLLLLRHASKCDA-EDGKCEVTPHCASMKRLWAHISTCAQKDCQVAHCLSSRYVLMHYRKCKDSKCPACAPVRAAIQK 662
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: B8LBX3_THAPS (Histone acetyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBX3_THAPS) HSP 1 Score: 98.2 bits (243), Expect = 3.110e-17 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 757 LRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAII 1002
+R +Q+RLLLL H+S+CP+ + +C +P+C +K LW+H+A+C D C VPHC SSR ++ H KCK+P C CGPVR +
Sbjct: 429 IRHKQQRLLLLHHSSKCPY-DNDKCKVTPYCGEMKKLWKHMARCTDNECRVPHCFSSRSILSHCRKCKDPGCPACGPVRETV 509
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Match: A0A6V0BSR0_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BSR0_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.130e-17 Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 757 LRQQQERLLLLRHASRCPFREEGQCPTSPHCLVVKVLWRHIAQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQRLLG 1035
+R +Q+RLLLLRHASRC + CP +PHC +K LW HIA C D C V SSR+V+ HY +CK +C CGPVR I + D ++ G
Sbjct: 688 VRHKQQRLLLLRHASRCEHK--SNCPVTPHCANMKKLWEHIAHCKDQYCNVAXXLSSRYVLSHYRRCKNEECPACGPVRETIRKTHDREQQQG 778 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1912.6094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1912.6094.1 >prot_Ecto-sp13_S_contig1912.6094.1 ID=prot_Ecto-sp13_S_contig1912.6094.1|Name=mRNA_Ecto-sp13_S_contig1912.6094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=384bp METWRDMEVAVPQGDFGSSSSSRAAGGTGGSSGGAALAPPGVFVFGGATPback to top mRNA from alignment at Ecto-sp13_S_contig1912:300..5126- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1912.6094.1 ID=mRNA_Ecto-sp13_S_contig1912.6094.1|Name=mRNA_Ecto-sp13_S_contig1912.6094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4827bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1912:300..5126- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1912:300..5126- >mRNA_Ecto-sp13_S_contig1912.6094.1 ID=mRNA_Ecto-sp13_S_contig1912.6094.1|Name=mRNA_Ecto-sp13_S_contig1912.6094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1152bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1912:300..5126- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |