mRNA_Ecto-sp13_S_contig19104.6087.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: D8LS26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS26_ECTSI) HSP 1 Score: 348 bits (893), Expect = 7.860e-117 Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 1
Query: 1 RQNKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAEYVRAHPSLTFQFGLRLFLLANWVMYVLPLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVP 555
+QNKA EALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARP ETLAEYVRAHPSLTFQFGLRLFLLANWVMY+LPLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANV TDPCCQTIMTALLFV NRPYLVGIVP
Sbjct: 118 KQNKATEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPRETLAEYVRAHPSLTFQFGLRLFLLANWVMYMLPLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVVTDPCCQTIMTALLFVFNRPYLVGIVP 302
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: W7TYT4_9STRA (Stress-inducible protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYT4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.190e-20 Identity = 64/187 (34.22%), Postives = 104/187 (55.61%), Query Frame = 1
Query: 13 AAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAEYVRAH----PSLTFQFGLRLFLLANWVMYVLPLQAAS--LFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVV--NRPYLVGI 549
A EAL DA++C E+ P++AKG+SR+G A++R+GR+ +A AAY++GL + PG+ +L + L EA + AA P L ++RA T F R+F+L N ++Y++P A L +YRR+LY ++ LY HG +F ++ A D + +LL + ++ YL G+
Sbjct: 63 AYEALADAKKCTEIQPAFAKGWSRVGAAMYRMGRYPEAVAAYTEGLVQAPGNADLTRALAEA------SHAAQEMRGPPRRDLLPHLRAFFLKDRLATRLFLPRVFMLLNGLIYLIPFLPAGWGLASYRRVLYTAAVLHLYALYNAHGFPKFTIDFLARCMQDVHASPLFLSLLLLSFRSKTYLPGV 243
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: A0A6G0WJ10_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJ10_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.350e-20 Identity = 61/189 (32.28%), Postives = 99/189 (52.38%), Query Frame = 1
Query: 7 NKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAEYVRAHPSLTFQFGLRLFLLANWVMY-----VLPLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
NKAA+A+ DA++CVE+ P W KGYSR+GTAL+ ++ +A AAY KGL ++ L+ L ++ A A + A + L L ++QF LR ++ ++++Y V P F Y + L HG +FN YA ++ DP Q+++ +LLF ++ PY + ++PV
Sbjct: 52 NKAAQAVADAKKCVELRPDWPKGYSRLGTALYYQKKYTEAKAAYEKGLTKDSSDANLKDGL-----KNATAALAGTGAPQSLSQLCWQTTHAKFRSYQFALRSLMVISFLLYWTVGWVNP--GLGYFCYANFFKLAVLNYVSFLAYNHGTPKFNQAYAQSLVLDPATQSLLFSLLFWLSTPYAMALLPV 233
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: W4G6L4_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6L4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.800e-18 Identity = 69/192 (35.94%), Postives = 100/192 (52.08%), Query Frame = 1
Query: 7 NKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAE--YVRAHPSL-TFQFGLRLFLLANWVMYVL-----PLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
NKAA+A+ DA + VE+ P W KGYSR+GT+LF ++ A AAY KGL ++ L+ L A AA S P +TL + + H T+QF LR ++ ++V+Y P AA FA L A+ +V+ L HG + N YA + DP Q+++ ALLF + PY + + PV
Sbjct: 52 NKAAQAVTDARKVVELRPEWPKGYSRLGTSLFYQKKYADAKAAYEKGLAKDANDANLKDGLKNAT-------AALSGVGAP-QTLRQLCWDTTHAKFRTYQFALRALMIVSFVLYWTAGWGSPSLAAFSFANFFKLAAINYVSFLAY--NHGTPKLNQAYAQRLIMDPATQSLLFALLFWFSTPYGLALFPV 233
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: A0A024UL73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UL73_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.360e-17 Identity = 68/192 (35.42%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 7 NKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAE--YVRAHPSL-TFQFGLRLFLLANWVMYVL-----PLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
NKAA A+ DA + VE+ P W KGYSR+GTALF ++ +A AAY KGL ++ L+ L A AA S P +TL + + H TFQF LR + ++V+Y P AA FA L A+ +V+ L HG + YA + DP Q+++ +LLF + PY + + P+
Sbjct: 52 NKAALAVTDARKVVELRPDWPKGYSRLGTALFYQKKYTEAKAAYEKGLTKDATDANLKDGLKNAS-------AALSGVGAP-QTLRQLCWETTHAKFRTFQFALRALQIVSFVLYWTAGWGSPDFAAFCFANFFKLAAINYVSFLAY--NHGTPKLTQAYAQRLVMDPATQSLLFSLLFWFSTPYALALFPI 233
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: H3GEV8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEV8_PHYRM) HSP 1 Score: 88.6 bits (218), Expect = 2.630e-17 Identity = 68/195 (34.87%), Postives = 97/195 (49.74%), Query Frame = 1
Query: 10 KAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGS---------VELRKNLLEAQKQHVAAQAAASRAARPLETLAEYVRAHPSLTFQ---FGLRLFLLANWVMYVLPLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
KA EAL DA++CV PSW KGYSR G+AL+ LGR+ A AY GL+ E + VE + + A H AA +AS A P TL ++ FQ F LR +L +V + +P+ + AY + +A L HG ++NA YA + DP Q L+F V+ P+ + ++PV
Sbjct: 55 KADEALKDADQCVARQPSWPKGYSRRGSALYALGRYADAYRAYQDGLKLEASNAGLLEGLRAVEAKLSTQRAGTSHGAA--SASHAPPPATTLRTFLLGSKRSMFQLYQFVLRSLMLLCFVNFWVPVLLSGYSAYANFFKLALVNHASYLAFTHGVPKWNAAYAQRLLLDPAAQAFFFCLVFWVSAPHGMALMPV 247
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: A0A024UKI7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKI7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 6.080e-17 Identity = 68/192 (35.42%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 7 NKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAE--YVRAHPSL-TFQFGLRLFLLANWVMYVL-----PLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
NKAA A+ DA + VE+ P W KGYSR+GTALF ++ +A AAY KGL ++ L+ L A AA S P +TL + + H TFQF LR + ++V+Y P AA FA L A+ +V+ L HG + YA + DP Q+++ +LLF + PY + + P+
Sbjct: 52 NKAALAVTDARKVVELRPDWPKGYSRLGTALFYQKKYTEAKAAYEKGLTKDATDANLKDGLKNAS-------AALSGVGAP-QTLRQLCWETTHAKFRTFQFALRALQIVSFVLYWTAGWGSPDFAAFCFANFFKLAAINYVSFLAY--NHGTPKLTQAYAQRLVMDPATQSLLFSLLFWFSTPYALALFPI 233
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: A0A485KNB9_9STRA (Aste57867_9499 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNB9_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.160e-16 Identity = 65/192 (33.85%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 7 NKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAE--YVRAHPSL-TFQFGLRLFLLANWVMYVLP---LQAASLFAYRRL--LYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
NKAA+A+ DA +CVE+ P W KGYSR+GT+LF ++ A AAY KGL ++ L+ L A AA S A P +TL + + H +QF LR ++ ++V+Y A + F + + A+ FV+ L HG + NA Y + DP Q+++ LLF + PY + P+
Sbjct: 53 NKAAQAVADARKCVELRPEWPKGYSRLGTSLFYQKKYADAKAAYEKGLTKDAADANLKDGLKNAT-------AALSGAGAP-QTLRQLCWDTTHAKFRAYQFVLRALMVISFVLYWTAGWGSAALATFCFGNFFKVAALNFVSFLAY--NHGTPQLNAAYGQRLVMDPATQSLLFCLLFWFSSPYALAFFPI 234
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: A0A484E4I5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4I5_BRELC) HSP 1 Score: 83.6 bits (205), Expect = 1.610e-15 Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 1
Query: 7 NKAAEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAAS-------RAARPLETLAEYVRAHPSLTFQFGLRLFLLANWVMYVLPLQAASLFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVATDPCCQTIMTALLFVVNRPYLVGIVPV 558
NKA EAL DA++C+ + P+W KGYSR G AL+ LGR+ A AY GL ++ + L + L + + V S A L T + + +QF LR+ LL + + +P +S AY + +A L HG +++A YA + DP Q L+F V+ P+ + ++PV
Sbjct: 61 NKANEALNDADQCIALQPTWTKGYSRRGAALYALGRYTDAYRAYKDGLSQDASNTGLLEGLRAVEAKLVTPGTTTSSXXXSTPHATTTLTTFLFGSKHNMFQLYQFLLRILLLLCFGNFWVPTLLSSSVAYANFFKLSLVNHASFLAFTHGIPKWSASYAQRLLLDPAAQLFFFCLVFWVSEPHGLAMMPV 251
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Match: A0A2W1BB33_HELAM (Stress-induced-phosphoprotein 1 n=3 Tax=Heliothinae TaxID=95178 RepID=A0A2W1BB33_HELAM) HSP 1 Score: 77.4 bits (189), Expect = 2.830e-13 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 16 AEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPLETLAEYVRAHP 285
A AL DA++ + +NP+W+KGYSR G+AL LGRHD+A AY KGLE EPG+ +L L E +KQ V + + E L E +RA+P
Sbjct: 55 AAALADADQTIALNPTWSKGYSRKGSALAYLGRHDEAIEAYEKGLELEPGNEQLASGLAEVKKQVVELK-------QKTEQLFEKLRANP 137 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19104.6087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19104.6087.1 >prot_Ecto-sp13_S_contig19104.6087.1 ID=prot_Ecto-sp13_S_contig19104.6087.1|Name=mRNA_Ecto-sp13_S_contig19104.6087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp MDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELback to top mRNA from alignment at Ecto-sp13_S_contig19104:578..2972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19104.6087.1 ID=mRNA_Ecto-sp13_S_contig19104.6087.1|Name=mRNA_Ecto-sp13_S_contig19104.6087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2395bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19104:578..2972+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19104:578..2972+ >mRNA_Ecto-sp13_S_contig19104.6087.1 ID=mRNA_Ecto-sp13_S_contig19104.6087.1|Name=mRNA_Ecto-sp13_S_contig19104.6087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19104:578..2972+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |