mRNA_Ecto-sp13_S_contig1907.6070.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A6H5JQN2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQN2_9PHAE) HSP 1 Score: 2338 bits (6060), Expect = 0.000e+0 Identity = 1504/1931 (77.89%), Postives = 1531/1931 (79.29%), Query Frame = 1
Query: 1 MDASSLSVWASELDSKNTKRRLQALEDLGAALQSQPPLSSSETASGGGLTCNYDDNSWQQIVAPLVRTLRDNNFKVCRASLSCLESLVARVTEHDAARQTAGRTAAAAAVAASGRNGSTNSSITPFLSLITPAVVECLGNSKAVVQEKGIDLLLAVSDPAVAGGRDTVCSLQRHFAGHRNWRVRERLVAYLGRVAELDPAGINSIHQXXXXXXXXXXX--ETESSLLAGLLADALNDSASQVRQEALAVATRVVGMLAGNGGPVLLAQLEAKGVRQVALSALRDAGSGSATGGGGGR---ETGSALTDGAAATAGLLSPITPAPQTSSRSGAVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KGGRGGTTSVLTRAGAGVPEGERGAPTPTGGEAAXXXXXXXRAGSPAALIGNSPRGLVLGSGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAMLALARWGDAAFDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQASRTRISIGSLPNRHVLREDQEFDAEAFVRAANAAAEDLQPALGEHPEDVEGYNDNGGNSGITAGGGATTPGATDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGTHHGAPSSTSSGAHQFAQRRPARAVFDGEGGLAXXXXXXXXXXXXXXXXRVKVDRGAAADSGGGGSGRVLRPXXXXXXXXXXXXXXXXALHDGTMDVADNGNAFSFGAGSAFDAVGXXXXXXXXXXXXXKNRSAXXALRVASGGGIEGEAAATMMPATAKSGAFRVPRGGASETMTRVPAAASGDALHQRSPAARVVARRSSVVPTAGGEGIPQSFGAPGALGGVSKGGRGVQPARVVGRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVVAAPVVLDRRHVLRQMDDLADQAGASHWGARTEALESMLHLLTVEGGGXXXXXXGSSNGSGERGEGGKFVLESRPASRRLETVITERTRDVNFRVVAASLKLFGGLVEAHPALMAGHTSALLPSVFPTLADPKEPVRQAANEALNACRAAYNPNQLCSSLSPRVLELPAGRARTGLLEFLAVLVPHSAVFFIDVHXXXXXXXXXXXHMQSLTQRVASALAQTPPPSNWDGSLGEDGPTSAGPAASAAIRLLMALSRLDRDALATASAALPPELAAAVRRALSFLHPESPSPPRRTEVASLSPIGAGESAVAAGGSVEADGRRSPTTVSDGDGEEHGVAAVVTPAVGGVRSVGGKSGDGNEGSXXXXXXXXXXXXXXXXXXXXXXXXC-----PPGEGGFALSSNPGSAFLCEERSGGRGRLEPGSALFTPPEQRQQRNPHRQPLAPVTPLDSNRQSVGEQHVVLVSGGSGKNKQLAGFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAVMVGGRLIAGLSRGARSHRTMEALSSLRGLADGEGAGGHPDFWPRYFGQVLMLLLEGAAAVSPVAAAAGD-GVGRGEAAATGEXXXXXXXXXXXRPGGVYSTPSSRRRALLRAKHLQGVRCLVARRGELFPGSTEMVVGRLVEIGGXXXXXEDPTVTVRCEAEACLADLVGVLDPARYLAVLTPLLALLPDAAGAGGQPKEG---------LAGGARGVLAQCVALGALRALTPRLSSPGLLGALGAGPLLAGLEAALDGGDLEARKRAVLALVEMYQVLEEALLPFLANFPTNRLKLITMYIEQRRARDKLASGAAAAAGTGSASTPGFATVKLGASGAIAATMATRFTPIR 5730
MDASSLS WASELDSKNTKRRLQALEDLG ALQSQPP SSSETASGGGL CNYDDNSWQQIVAPLV TLRDNNFKVCRASL+CL+SLVARVTEHDA R+TAGRTAAAAA SGR GSTNSSITPFLSLITPAVVECLGNSKA VQEKG+DLLLAVSDPAVAGGRDTV SLQRHFAGHRNWRVRERLVAYLGRVAELDPAGINSIH XXXXXXXXXXX ETESSLLAGLLADALNDSASQVRQEAL ATRVV ML GNGGP LLAQLEAKGVRQV LSALRDAGSGSATG ETGSA T+GAAATAGLLSPITPAPQ +SRSGA XXXXXXXXXXXXXXXX KGGRG TTSVLTRAG GVP GERGAPTPTGGEAA RAGSP LIGNSPRG LGSGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMR LAGVALGGGGSEF ALL GLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYA+LALA WGDAAFDR AVQLRDMVAAAVADADSSVRATARRAYWVLNLRF DLAQSVMGSLAPSMQASRT PA+ VHGTHHGAPSSTSSGAHQFAQRRPA A FDGEGGLAXXXXXXXXXXXXXXX VKVDR GRVLR XXXX A HDGTMDVADN NA SFGAGSAFD+VGXXXXXXXXXXXXX XX EGE AATMMPATAKSGAFRVPRGG SETMTRVPAAASGDALHQRSPAARVVARRSSVVP AGGEG QS+GAPGALGGVSKGGRGVQPAR+VGRQQ RAVVAAP+VLDRRHVLRQMDDLADQAGASHWGARTEALESMLHLLT EGG XXXXX GS+ GSG+RGEGGKFVLESRPASRRLETVI ERTRDVNFRVVAA+LKLFGGLVEAHPALMA HTSALLPSVFPTLADPKEPVRQAANEALNACRAAYNPNQLCSSL PRVLELPAGRARTGLLEFLAV+VPHSAVFF+D HXXXXXXXXXXXHMQSLTQRVASALAQTPPPSNWDGSLGEDGPTSAGPAASAAIRLL ALSRLD DALATASAALPPE AAAVRRALSFL P+SPSPPRRT A+LSP AGESAVAA G+VEADG RSPTTVSDGDGEEHGVAAVVTPAVGGVR VGGK GDGNEGS XXXXXXXXXXXXXXXXXXXXXXX PPGEGGFALSSNPGSAFLCEERSG RGRLE S LFTPPEQRQQRNPHRQPLAP+TP DSNRQ GEQH LVSGGSGK KQLAGFP AEAVMVGGRLIAGLSRGARSHR +EALSSLRGLADGEGAGG PDFWPRYFGQVLMLLLEGAA SPV GVGRGE XXXXXXXXXXX ALLRAKHLQGVRCLVARRGE+FPGSTEMVVGRLVEIGG DP+V VRCEAEACLADLV VLDPARYLAVLTPL+ALLP A LAGGA+GVLAQCVALGALRALTPRLSSPGLLGALGAGPLLAGLEAAL GGDLEARKRAVLALVEMYQVLEEALLPFLANFPTNRLKLITMYIEQRRARDK AS AAA TGSASTP FATVK GASGA+AAT TRFTPIR
Sbjct: 1 MDASSLSAWASELDSKNTKRRLQALEDLGEALQSQPPRSSSETASGGGLACNYDDNSWQQIVAPLVHTLRDNNFKVCRASLACLKSLVARVTEHDATRKTAGRTAAAAA---SGRKGSTNSSITPFLSLITPAVVECLGNSKAAVQEKGVDLLLAVSDPAVAGGRDTVSSLQRHFAGHRNWRVRERLVAYLGRVAELDPAGINSIHXXXXXXXXXXXXAAETESSLLAGLLADALNDSASQVRQEALGAATRVVRMLGGNGGPGLLAQLEAKGVRQVVLSALRDAGSGSATGXXXXXXXXETGSAFTEGAAATAGLLSPITPAPQLASRSGAXXXXXXXXXXXXXXXXXXXXGIANGGGARLTTATRSRRPTAAGKGGRGATTSVLTRAGVGVP-GERGAPTPTGGEAAGRGGGGSRAGSPTTLIGNSPRGCALGSGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRRLAGVALGGGGSEFSALLAGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAVLALACWGDAAFDRCAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFPDLAQSVMGSLAPSMQASRT------------------------------------PAVARR-----------------------------------------------------------------VHGTHHGAPSSTSSGAHQFAQRRPASAAFDGEGGLAXXXXXXXXXXXXXXX--VKVDRXXXXXXXXXXXGRVLRRXXXXPARRTRPPGRAPAAHDGTMDVADNRNASSFGAGSAFDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-EGELAATMMPATAKSGAFRVPRGGVSETMTRVPAAASGDALHQRSPAARVVARRSSVVPAAGGEGEYQSYGAPGALGGVSKGGRGVQPARIVGRQQQQQRLDASAVGRREEEPGESKADGGGAMRAVVAAPIVLDRRHVLRQMDDLADQAGASHWGARTEALESMLHLLTAEGGXXXXXXDGSNIGSGKRGEGGKFVLESRPASRRLETVIAERTRDVNFRVVAAALKLFGGLVEAHPALMADHTSALLPSVFPTLADPKEPVRQAANEALNACRAAYNPNQLCSSLCPRVLELPAGRARTGLLEFLAVVVPHSAVFFLDGHXXXXXXXXXXXHMQSLTQRVASALAQTPPPSNWDGSLGEDGPTSAGPAASAAIRLLTALSRLDGDALATASAALPPEPAAAVRRALSFLRPKSPSPPRRTGAAALSPTSAGESAVAAVGAVEADGTRSPTTVSDGDGEEHGVAAVVTPAVGGVRGVGGKPGDGNEGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGEGGFALSSNPGSAFLCEERSGERGRLEAESPLFTPPEQRQQRNPHRQPLAPLTPRDSNRQLTGEQHAGLVSGGSGKIKQLAGFPTPKKSLVLSAVAPASATRSSTVPAATSQDQKAAAEAVMVGGRLIAGLSRGARSHRKIEALSSLRGLADGEGAGGRPDFWPRYFGQVLMLLLEGAAVSSPVXXXXXXXGVGRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLRAKHLQGVRCLVARRGEMFPGSTEMVVGRLVEIGGGGGEG-DPSVAVRCEAEACLADLVSVLDPARYLAVLTPLIALLPAAXXXXXXXXXXXXXXXXXXXLAGGAQGVLAQCVALGALRALTPRLSSPGLLGALGAGPLLAGLEAALGGGDLEARKRAVLALVEMYQVLEEALLPFLANFPTNRLKLITMYIEQRRARDKRASAAAAC--TGSASTPRFATVKSGASGAVAATTETRFTPIR 1820
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A4D9CV68_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV68_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.240e-28 Identity = 82/230 (35.65%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 1327 LVAVTVYTERDVRREVEAVKAGLE-HESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAMLALARWGDAAFDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
+V+V V +++++ +E++++ GL E DWQ +A+ + G+A+GGGG P + GL ++ ++ ++ RS ++RE C VA+LA+ L D LA+LW P +L+ T + V+A + D+ R + CT+ GFPRLLP L++ +K+ R RC+ LAL W +FDR + M+ AAVAD VRA AR+ +W +F A V+ SL P+ Q
Sbjct: 352 VVSVAVRSDKELAQEMQSIAVGLAASEDDWQVRTAALHRVQGLAVGGGG-RLPTFVPGL--RAIQQLFTQQILSLRSTLSREGCLTVAILAQVLGDDMLPLADLWAPAVLKTTQVNISVMALSADQCLRCLVSCTRQGFPRLLPILLEGTTSKNDTERLRCVTAITLALWHWDAVSFDRAVDAVGAMLKAAVADKKEPVRAAARQCFWAFRRKFPGEADEVLESLDPNRQ 578
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: UPI001CFB38B1 (CLIP-associated protein n=4 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CFB38B1) HSP 1 Score: 116 bits (290), Expect = 4.380e-22 Identity = 83/246 (33.74%), Postives = 134/246 (54.47%), Query Frame = 1
Query: 1291 GGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGH---KVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
GGE+ LEP + VY+E+++ RE E V + L E DW ++AM+ + G+ LGG + +P R + ++VG ++S+ RS++ ++AC ++ L++ L F A AE+++P L + V V+A + D + + K R+LP + D AKN +SA +R RC +YA+L L W DA R A Q D++ VADA S VR+TAR Y + + D ++ + S P +Q
Sbjct: 262 GGEDITEKPLEP---IKVYSEKELIREFEKVASTLVPEKDWSIRIAAMQRVEGLVLGGA-TNYPCF-----RGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCK--VARVLPRIADCAKNDRSAVLRARCCEYALLMLEHWPDAPEIQRSAEQYEDLIRCCVADAMSEVRSTARMCYRMFAKTWPDRSRRLFSSFDPVIQ 496
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A6I9R1C6_ELAGV (CLIP-associated protein isoform X1 n=5 Tax=Arecaceae TaxID=4710 RepID=A0A6I9R1C6_ELAGV) HSP 1 Score: 115 bits (289), Expect = 5.810e-22 Identity = 83/253 (32.81%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 1267 PRGLVLGSGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGS--EFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
PRG + +GGE +P+ + VY+E+++ RE+E + + L E DW ++AM+ + G+ GG FP LL LV + ++S+ RS++ ++AC + +L++ L F A AE+++P L + V V+A + D + + K R+LP + DTAKN +SA +R RC +YA+L L W DA R A D++ VADA S VR+TAR Y + + + ++ + S P +Q
Sbjct: 255 PRGSMF-TGGETDITE--KPVDPIKVYSEKELIREIEKIASTLVPEKDWSLRIAAMQRVEGLVFGGAADYPSFPMLLKQLVTP-----LSTQLSDRRSSIVKQACHLLCLLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCK--VARVLPRIADTAKNDRSAVLRARCCEYALLVLEYWADALEIQRSADLYEDLIKCCVADAMSEVRSTARSCYRMFTKTWPERSRRLFSSFDPVIQ 497
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: UPI001891181E (CLIP-associated protein-like isoform X4 n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891181E) HSP 1 Score: 112 bits (281), Expect = 6.440e-22 Identity = 74/235 (31.49%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 1321 EPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQAS 2016
+P+ + V++E+++ RE+E + + L E DW ++AM+ + + GG ++P+ + L++ VH + ++++ RS++ ++AC + VL++ L F A AE+++P L + V V+A + D + I K R++P + DT+KN +SA +R RC +YA+L L W DA R A D++ VADA S VRATAR Y + + + ++ + S P++Q S
Sbjct: 270 KPVEPIRVHSEKELFREIEKIASALNPEKDWSIRIAAMQRIEALVYGGA-IDYPSFFM-LLKQLVHPL-SSQLADRRSSIVKQACHLLNVLSKELLSDFEACAEIFIPALFKLVVITVLVIAESSDNCVKTILRNCK--VSRIVPLIADTSKNDRSAILRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRATARSCYRMFIKTWPERSRRLFMSFDPAIQRS 499
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A6G0XDU9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDU9_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.500e-22 Identity = 69/223 (30.94%), Postives = 122/223 (54.71%), Query Frame = 1
Query: 1345 YTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAMLALARWGDAAFDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
+++R++ E++ V GL +S+W R V AM+ L AL GG+ + +R + E + +V + RSAV REAC +AV+A + D F AE ++ LL++T + ++A + D ++I T+ G+P+++ L+D A++++ +R C+DY +A + W +R A + ++ + DA + VR ARR +W + F A+SV L S Q
Sbjct: 268 FSDRELTSELQRVTQGLTPDSEWSRRVEAMQRLQ--ALVAGGAALQPIFASTLR-QLRETLCEQVGDLRSAVLREACTTIAVIANAMGDAFNTHAEFFVAALLKSTIVTIQIIAVSADSCLKSIVRSTQTGYPKVMTKLIDGARSRNQVLRLHCVDYLTMAFSLWHVVVLERAADSMAALLPHILCDAQADVRLAARRCFWSFHRTFEARAESVRMQLDSSTQ 487
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A804L9P6_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804L9P6_MUSAM) HSP 1 Score: 115 bits (288), Expect = 7.550e-22 Identity = 80/244 (32.79%), Postives = 136/244 (55.74%), Query Frame = 1
Query: 1288 SGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
S GE A L +V + VY+E+++ +E+E + + L + DW ++AM+ + G+ GG +++P+ L L + + + ++ + RS++ ++AC +++L++ L F AE+++P LL+ V V+A + D + I K R+LP + DTAKN KSA +R RC DYA+L L W DA R A D++ VADA S VR+TAR Y + + + +Q + S P++Q
Sbjct: 261 SSGEIDATEKL--VVPIKVYSEKELNKEMERIASTLVPDKDWSLRIAAMQRVEGLVFGGA-ADYPSFLTLLKQLATP--LSTQLLDRRSSIVKQACHLLSLLSKELLGDFETCAEMFIPVLLKLVVITVLVIAESADTCIKTILRNCK--VARILPRIADTAKNDKSAVLRARCCDYALLVLEYWADALEIHRSADLYEDLIKCCVADAMSEVRSTARTCYRMFTKTWPERSQRLFLSFEPAIQ 497
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A446VH82_TRITD (Uncharacterized protein n=12 Tax=Pooideae TaxID=147368 RepID=A0A446VH82_TRITD) HSP 1 Score: 114 bits (284), Expect = 8.050e-22 Identity = 75/233 (32.19%), Postives = 132/233 (56.65%), Query Frame = 1
Query: 1321 EPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
+P+ + V++E+++ RE+E + + L E DW ++AM+ + + GG ++P+ V L++ VH + ++++ RS++ ++AC + VL++ L F A AE+++P L + V V+A + D + I K R++P + DTAKN +SA +R RC +YA+L L W DA R A D++ VADA S VRATAR Y + + + ++ + S P++Q
Sbjct: 270 KPVEPIRVHSEKELFREIEKIASALNPEKDWSIRIAAMQRIEALVYGGA-IDYPSFFV-LLKQLVHPL-SSQLADRRSSIVKQACHLLNVLSKELLSDFEACAEIFIPALFKLVVITVLVIAESSDNCVKTILRNCK--VSRIVPLIADTAKNDRSAILRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRATARSCYRMFIKTWPERSRRLFMSFDPAIQ 497
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A0A9CS65_ARUDO (CLASP n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CS65_ARUDO) HSP 1 Score: 113 bits (283), Expect = 9.250e-22 Identity = 82/235 (34.89%), Postives = 132/235 (56.17%), Query Frame = 1
Query: 1315 ALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
A +P+ V VY+E+++ RE E + A L E DW ++AM+ + + GG +FP+ L+ L++ V + ++S+ RS++ ++AC + +L++ L F AEL++P L + V V+A + D + I K R+LP +VDTAKN +SA +R RC +YA+L L W DA R A DM+ VADA S VRATAR Y + + + ++ + S P++Q
Sbjct: 221 AEKPVEPVKVYSEKELLREFEKIAATLVPEKDWSLRIAAMQRIEALVYGGA-IDFPSFLM-LLKQLVPPL-STQLSDRRSSIVKQACHLLNILSKELLGDFEPCAELFIPMLFKLVVITVLVIAESADTCIKTILRNCK--VARILPRIVDTAKNDRSAILRARCCEYALLMLEYWADAPEIQRSADIYEDMIKCCVADAMSEVRATARICYRMFAKTWPERSRRLFMSFDPAIQ 450
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Match: A0A4D6N2V0_VIGUN (Uncharacterized protein n=3 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6N2V0_VIGUN) HSP 1 Score: 115 bits (287), Expect = 9.730e-22 Identity = 78/228 (34.21%), Postives = 129/228 (56.58%), Query Frame = 1
Query: 1336 VTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRWLAGVALGGGGSEFPALLVGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKN-KSAAIRRRCLDYAMLALARWGDAA-FDRFAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFADLAQSVMGSLAPSMQ 2010
+ VY+E+++ RE++ + A L E DW ++AM+ + G+ LGG +++P GL++ V + ++S+ RS++ ++AC + L++ L F A AEL++P LL+ V V+A + D + + K R+LP + D AKN +SA +R RC DYA+L L W D A R A DM+ V+DA S VR+TAR Y + + D ++ + S P++Q
Sbjct: 275 IKVYSEKELIREIDKIAATLVPEKDWSIRIAAMQRIEGLVLGGA-TDYPCFF-GLLKQLVGPL-STQLSDRRSSIVKQACHLLCFLSKDLLGDFEACAELFIPVLLKLVVITVLVIAESADNCIKTMLRNCK--VARVLPRVADCAKNDRSAVLRARCCDYALLILEHWPDEAEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPDRSRHLFSSFDPAIQ 497 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1907.6070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1907.6070.1 >prot_Ecto-sp13_S_contig1907.6070.1 ID=prot_Ecto-sp13_S_contig1907.6070.1|Name=mRNA_Ecto-sp13_S_contig1907.6070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1911bp MDASSLSVWASELDSKNTKRRLQALEDLGAALQSQPPLSSSETASGGGLTback to top mRNA from alignment at Ecto-sp13_S_contig1907:1675..11954- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1907.6070.1 ID=mRNA_Ecto-sp13_S_contig1907.6070.1|Name=mRNA_Ecto-sp13_S_contig1907.6070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10280bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1907:1675..11954- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1907:1675..11954- >mRNA_Ecto-sp13_S_contig1907.6070.1 ID=mRNA_Ecto-sp13_S_contig1907.6070.1|Name=mRNA_Ecto-sp13_S_contig1907.6070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5733bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1907:1675..11954- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |