mRNA_Ecto-sp13_S_contig19067.6068.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19067.6068.1
Unique NamemRNA_Ecto-sp13_S_contig19067.6068.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: D8LKV4_ECTSI (Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV4_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 5.760e-62
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENSLGASS 315
            SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKA+ELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPD ERDQ+VLARSQAL NSLGASS
Sbjct:  307 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKALELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDTERDQEVLARSQALANSLGASS 411
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A6H5LAG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAG9_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 5.180e-53
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 1 
Query:   43 MYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENSLGASS 315
            MYLAITLARLEDFDNACSAYDKA+ELD GGGDYLTHLNYAVTLLNNDE ERAAEHYASFKKIFEALDPD ERDQ+V+A SQALENSLGASS
Sbjct:    1 MYLAITLARLEDFDNACSAYDKALELDDGGGDYLTHLNYAVTLLNNDEQERAAEHYASFKKIFEALDPDTERDQEVVASSQALENSLGASS 91
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A812V4P0_SYMMI (BBS4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V4P0_SYMMI)

HSP 1 Score: 119 bits (299), Expect = 6.000e-32
Identity = 56/104 (53.85%), Postives = 79/104 (75.96%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENSLGAS 312
            S AINL+P +A +YMYLA+TL++L+DFDN+C+AY KA+EL   G DY+ HLNY++TL  NDE ERA +H+A F+K+F ALD  +E D+DV A++  +  +L  S
Sbjct:   91 STAINLQPTYARAYMYLAVTLSKLDDFDNSCAAYTKAIEL---GEDYIIHLNYSITLYKNDELERAKDHFAKFEKLFAALDEASEVDEDVTAQASLIRTALRGS 191
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: K3WTZ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTZ6_GLOUD)

HSP 1 Score: 120 bits (300), Expect = 4.590e-30
Identity = 62/102 (60.78%), Postives = 80/102 (78.43%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 303
            SAAINLKPDF +SYMYLAITL RL+DF+NACSA++KA+E++    D+L HLNYA+TL NNDE ERA   +  F++IFEALD + +  DQ+VL + Q+L N L
Sbjct:  326 SAAINLKPDFPSSYMYLAITLGRLDDFENACSAFEKAIEMER---DHLFHLNYAITLYNNDEMERAKVQFDRFEEIFEALDDETKNADQEVLEQRQSLLNVL 424
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A397BJC2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BJC2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.660e-30
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 303
            SAAINLKPDFA+SYMYLAITL RL+DF+NACSAY+KA+E+D    D+L HLNYA+TLLNNDE ERA   +  F  IF  LD   +  D +V+A+ QAL  +L
Sbjct:  396 SAAINLKPDFASSYMYLAITLGRLDDFENACSAYEKAIEMDA---DHLFHLNYAITLLNNDEIERAKVQFDKFDAIFNTLDEATQSSDPEVMAQRQALLEAL 494
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A397C771_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C771_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.050e-29
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 303
            SAAINLKPDFA+SYMYLAITL RL+DF+NACSAY+KA+E+D    D+L HLNYA+TLLNNDE ERA   +  F  IF  LD   +  D +V+A+ QAL  +L
Sbjct:  406 SAAINLKPDFASSYMYLAITLGRLDDFENACSAYEKAIEMDA---DHLFHLNYAITLLNNDEIERAKVQFDKFDAIFNTLDEATQSSDPEVMAQRQALLEAL 504
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A397DQ18_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQ18_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.230e-29
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 303
            SAAINLKPDFA+SYMYLAITL RL+DF+NACSAY+KA+E+D    D+L HLNYA+TLLNNDE ERA   +  F  IF  LD   +  D +V+A+ QAL  +L
Sbjct:  428 SAAINLKPDFASSYMYLAITLGRLDDFENACSAYEKAIEMDA---DHLFHLNYAITLLNNDEIERAKVQFDKFDAIFNTLDEATQSSDPEVMAQRQALLEAL 526
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: D0MXK6_PHYIT (Sporangia induced Bardet-Biedl syndrome 4 protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=D0MXK6_PHYIT)

HSP 1 Score: 118 bits (295), Expect = 2.440e-29
Identity = 61/102 (59.80%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 303
            SAAINLKPDF +SYMYLAITL+RL+DF+NACSA+DKA+E++    D++ HLNYA+TL NNDE ERA   +  F++IFE LD +A   D +V  + QAL N+L
Sbjct:  327 SAAINLKPDFPSSYMYLAITLSRLDDFENACSAFDKAIEMER---DHMFHLNYAITLYNNDEMERARVQFDRFEEIFEGLDEEARSADPEVQEQRQALLNAL 425
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A7S2IJK4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IJK4_9EUKA)

HSP 1 Score: 116 bits (290), Expect = 3.990e-29
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSLG 306
            S +INLKPDF +SYMYLAITL RL+DFDNAC AY+KA+E++    D+L  LNYA+TL NN+E ERAA H+A F+ +FE LD +A   D +V  +  AL+ +LG
Sbjct:  196 STSINLKPDFPSSYMYLAITLNRLDDFDNACQAYEKAIEMEE---DHLFRLNYAITLFNNEEVERAALHFAEFELLFEKLDEEARNADPEVAEQRAALQEALG 295
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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A067C533_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C533_SAPPC)

HSP 1 Score: 117 bits (293), Expect = 4.460e-29
Identity = 63/103 (61.17%), Postives = 79/103 (76.70%), Query Frame = 1 
Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER--DQDVLARSQALENSL 303
            SAAINLKPDF +SYMYLAITL RL+DF+NACSAYDKA+E++    D++ HLNYA+TL NNDE ERA   +  F+ IFE LD +A R  D +V+ + QAL N+L
Sbjct:  320 SAAINLKPDFPSSYMYLAITLGRLDDFENACSAYDKAIEMEA---DHMFHLNYALTLFNNDELERAKVQFNKFEAIFETLD-EATRSSDPEVMDQRQALLNAL 418
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV4_ECTSI5.760e-6296.19Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LAG9_9PHAE5.180e-5392.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812V4P0_SYMMI6.000e-3253.85BBS4 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
K3WTZ6_GLOUD4.590e-3060.78Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A397BJC2_9STRA9.660e-3061.76Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A397C771_9STRA1.050e-2961.76Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A397DQ18_9STRA1.230e-2961.76Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
D0MXK6_PHYIT2.440e-2959.80Sporangia induced Bardet-Biedl syndrome 4 protein ... [more]
A0A7S2IJK4_9EUKA3.990e-2957.28Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A067C533_SAPPC4.460e-2961.17Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19067contigEcto-sp13_S_contig19067:320..2320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score204.9
Seed ortholog evalue1.8e-50
Seed eggNOG ortholog2880.D8LKV4
Preferred nameBBS4
Model size318
KEGG koko:K11447,ko:K16531
KEGG Pathwayko05202,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145
Exons3
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
Cds size318
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462972.244622-CDS-Ecto-sp13_S_contig19067:319..4271681462972.244622-CDS-Ecto-sp13_S_contig19067:319..427Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19067 320..427 +
1681462972.2654824-CDS-Ecto-sp13_S_contig19067:929..10551681462972.2654824-CDS-Ecto-sp13_S_contig19067:929..1055Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19067 930..1055 +
1681462972.276054-CDS-Ecto-sp13_S_contig19067:2236..23201681462972.276054-CDS-Ecto-sp13_S_contig19067:2236..2320Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19067 2237..2320 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19067.6068.1prot_Ecto-sp13_S_contig19067.6068.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19067 320..2320 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19067.6068.1

>prot_Ecto-sp13_S_contig19067.6068.1 ID=prot_Ecto-sp13_S_contig19067.6068.1|Name=mRNA_Ecto-sp13_S_contig19067.6068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTH
LNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENS
LGASS*
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mRNA from alignment at Ecto-sp13_S_contig19067:320..2320+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19067.6068.1 ID=mRNA_Ecto-sp13_S_contig19067.6068.1|Name=mRNA_Ecto-sp13_S_contig19067.6068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2001bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19067:320..2320+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTGCGGCTATCAACCTCAAGCCCGACTTCGCGGCGTCCTACATGTACTT
GGCGATCACTCTGGCTAGATTGGAGGACTTCGACAATGCCTGCAGTGCCT
ATGACAAGGTTAAACACGACCAAGAACAGAGACTTCCCATAGGACAGAAA
AGCACAGCCCGAATATCTTGCCCCTGTTGTACAGCAGCACAGAAGACACC
AGTTTTTTTCTTGACTCTCACCTACAACATGATAACAACAACAACACCTA
AGGACGGTTACAACGAAAACCGTTTTGACTGGAACGCTCTCATTCCGCAA
ATGAGGCCACGAGCTCACGGCTACGCACTCTGTGCCACCTCTTTCAGTCG
TTTTTCATGGTACTCAAAAATGCCACTAGAACAGGGCGTGGGGGCTTCAC
GCCAAGGTCCGCGAGGCTTTATCAATTCCACCTATGTATTTCCGGTCCAC
GGTCGGGAGGGACAGGCGGGAGCCTGTGCAATTACCATAATTCAGAAAGA
CTACAGCTGTAACAACGCTACCGGGTTGTCGCTTAGAATATTGACAAGTA
TACTAACAACAGCAACAACGACAGCACATGCTTTACGCGGTTTTGTGTCA
TTTCTTTCAGGCTGTGGAGCTAGATGGCGGCGGCGGCGACTACCTGACCC
ATCTCAATTACGCGGTGACCCTGCTCAATAACGACGAGCCGGAGAGAGCC
GCTGAGCACTATGCCAGCTTTAAGAAGATATTTGAGGTGGGTCTGTATGC
CTGGAAAAATCATACGCGAGTTTGGGCTGTTTGGTGATGACGAACGGGAG
TTGAGTATAGACATAATTCTCGCTGCCGATGCTGTTTCCGTGTTTTCCTT
GAGCACGCTCTCTGGCCTGTGCCCAGCACCTCTTGACCACCCATACAACT
GATCTTCAGGATAGAGAGATGAAAAATATCTAGGTTCACAGCGCGGGTCG
GGCTGTGGGAAGGGGGTTCCTTTCCCCATGGTCCTTGAGCCAACGGCTGC
CAACTAGGCAGCGAGTCAAAGGGAGGTAGAGCTCTTTCAGTTCAGGTTTC
CTTGGTGGGGTATTTCATAATCATTGCGGATGCGCTCAAAATGGAACACG
ACTTTTGTATTGGCATCAGCTAGAAAGTGAAGATTGCGTCCGTCTCCGCC
GCGAATGTTTCGGAGTCAGTTTAACCAAAGTAACTAAAGGCCGGCTTGAC
AGGATTAAATCGGTTGACCGGATGACCGGAATATTCGAAATTCGGCTTCT
TTTTGCGTAGAACCGGATAAAATTTTACCGCAGACCCGTTTTTCTCTTTT
CGGTTCAACCGGATTTTTCTGCTTCGTTTTTTCCGGATTCTCCAGATTCA
GTGTTACTGGGTTTCCGGTTTAACCGGATGACCCGATTCACCTGAATATT
ACCGCCTTAAAGCTTACGTAAATGGTTGGAGGGACTCGGTTTAGCAGGAT
AATATACCGGTTAGTAGATGATACCGGTTATCCAGAGGTAAAGGAGAATA
AATTACGTGTTTGACAACCCCCCCGTTCAGGTTGAAAAGGCGGGAAGTAA
TGTCGATAAGACAGATGGGCACGGGAGTACATTTCTATTTTGAAGACACC
TTTGGCAAAGTAGGAGGGCACCTGTTTCGGTCCTGCGGAAAAAGTGCTCC
GCCCTCTCGAGGGCCCGTGATGAATGGTCGAACCGCTAAGGAATGCAGAA
CACAAGAGCACGCGCCCCGCGCCCTGTTCATGCACAGCGATCACCCCCAC
TTTTCCGATTCGTTCGTTCTCTCCGCATTTTGCCCCCCCTGTTCGCGTTC
GTGTTGAACGACGCGTTTTTCGCAAGTTGATCAACGATCTTTTACAGTAC
CACCAATGGATCGACCAGTCTCTCACTTTGTTTGATCGATTGACTTATCA
ATGAATGCTGCTTGCAGGCTCTTGATCCCGATGCGGAGAGGGACCAGGAC
GTGTTAGCAAGAAGTCAAGCGCTGGAAAACTCCCTTGGAGCGTCCTCATG
A
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19067:320..2320+

>mRNA_Ecto-sp13_S_contig19067.6068.1 ID=mRNA_Ecto-sp13_S_contig19067.6068.1|Name=mRNA_Ecto-sp13_S_contig19067.6068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19067:320..2320+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTGCGGCTATCAACCTCAAGCCCGACTTCGCGGCGTCCTACATGTACTT
GGCGATCACTCTGGCTAGATTGGAGGACTTCGACAATGCCTGCAGTGCCT
ATGACAAGGCTGTGGAGCTAGATGGCGGCGGCGGCGACTACCTGACCCAT
CTCAATTACGCGGTGACCCTGCTCAATAACGACGAGCCGGAGAGAGCCGC
TGAGCACTATGCCAGCTTTAAGAAGATATTTGAGGCTCTTGATCCCGATG
CGGAGAGGGACCAGGACGTGTTAGCAAGAAGTCAAGCGCTGGAAAACTCC
CTTGGAGCGTCCTCATGA
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