prot_Ecto-sp13_S_contig19067.6068.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig19067.6068.1
Unique Name	prot_Ecto-sp13_S_contig19067.6068.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	106

Homology

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: D8LKV4_ECTSI (Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV4_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 5.760e-62
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENSLGASS 105
            SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKA+ELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPD ERDQ+VLARSQAL NSLGASS
Sbjct:  307 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKALELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDTERDQEVLARSQALANSLGASS 411

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A6H5LAG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAG9_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 5.180e-53
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0

Query:   15 MYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENSLGASS 105
            MYLAITLARLEDFDNACSAYDKA+ELD GGGDYLTHLNYAVTLLNNDE ERAAEHYASFKKIFEALDPD ERDQ+V+A SQALENSLGASS
Sbjct:    1 MYLAITLARLEDFDNACSAYDKALELDDGGGDYLTHLNYAVTLLNNDEQERAAEHYASFKKIFEALDPDTERDQEVVASSQALENSLGASS 91

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A812V4P0_SYMMI (BBS4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V4P0_SYMMI)

HSP 1 Score: 119 bits (299), Expect = 6.000e-32
Identity = 56/104 (53.85%), Postives = 79/104 (75.96%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENSLGAS 104
            S AINL+P +A +YMYLA+TL++L+DFDN+C+AY KA+EL   G DY+ HLNY++TL  NDE ERA +H+A F+K+F ALD  +E D+DV A++  +  +L  S
Sbjct:   91 STAINLQPTYARAYMYLAVTLSKLDDFDNSCAAYTKAIEL---GEDYIIHLNYSITLYKNDELERAKDHFAKFEKLFAALDEASEVDEDVTAQASLIRTALRGS 191

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: K3WTZ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTZ6_GLOUD)

HSP 1 Score: 120 bits (300), Expect = 4.590e-30
Identity = 62/102 (60.78%), Postives = 80/102 (78.43%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 101
            SAAINLKPDF +SYMYLAITL RL+DF+NACSA++KA+E++    D+L HLNYA+TL NNDE ERA   +  F++IFEALD + +  DQ+VL + Q+L N L
Sbjct:  326 SAAINLKPDFPSSYMYLAITLGRLDDFENACSAFEKAIEMER---DHLFHLNYAITLYNNDEMERAKVQFDRFEEIFEALDDETKNADQEVLEQRQSLLNVL 424

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A397BJC2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BJC2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.660e-30
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 101
            SAAINLKPDFA+SYMYLAITL RL+DF+NACSAY+KA+E+D    D+L HLNYA+TLLNNDE ERA   +  F  IF  LD   +  D +V+A+ QAL  +L
Sbjct:  396 SAAINLKPDFASSYMYLAITLGRLDDFENACSAYEKAIEMDA---DHLFHLNYAITLLNNDEIERAKVQFDKFDAIFNTLDEATQSSDPEVMAQRQALLEAL 494

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A397C771_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C771_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.050e-29
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 101
            SAAINLKPDFA+SYMYLAITL RL+DF+NACSAY+KA+E+D    D+L HLNYA+TLLNNDE ERA   +  F  IF  LD   +  D +V+A+ QAL  +L
Sbjct:  406 SAAINLKPDFASSYMYLAITLGRLDDFENACSAYEKAIEMDA---DHLFHLNYAITLLNNDEIERAKVQFDKFDAIFNTLDEATQSSDPEVMAQRQALLEAL 504

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A397DQ18_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQ18_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.230e-29
Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 101
            SAAINLKPDFA+SYMYLAITL RL+DF+NACSAY+KA+E+D    D+L HLNYA+TLLNNDE ERA   +  F  IF  LD   +  D +V+A+ QAL  +L
Sbjct:  428 SAAINLKPDFASSYMYLAITLGRLDDFENACSAYEKAIEMDA---DHLFHLNYAITLLNNDEIERAKVQFDKFDAIFNTLDEATQSSDPEVMAQRQALLEAL 526

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: D0MXK6_PHYIT (Sporangia induced Bardet-Biedl syndrome 4 protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=D0MXK6_PHYIT)

HSP 1 Score: 118 bits (295), Expect = 2.440e-29
Identity = 61/102 (59.80%), Postives = 79/102 (77.45%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSL 101
            SAAINLKPDF +SYMYLAITL+RL+DF+NACSA+DKA+E++    D++ HLNYA+TL NNDE ERA   +  F++IFE LD +A   D +V  + QAL N+L
Sbjct:  327 SAAINLKPDFPSSYMYLAITLSRLDDFENACSAFDKAIEMER---DHMFHLNYAITLYNNDEMERARVQFDRFEEIFEGLDEEARSADPEVQEQRQALLNAL 425

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A7S2IJK4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IJK4_9EUKA)

HSP 1 Score: 116 bits (290), Expect = 3.990e-29
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER-DQDVLARSQALENSLG 102
            S +INLKPDF +SYMYLAITL RL+DFDNAC AY+KA+E++    D+L  LNYA+TL NN+E ERAA H+A F+ +FE LD +A   D +V  +  AL+ +LG
Sbjct:  196 STSINLKPDFPSSYMYLAITLNRLDDFDNACQAYEKAIEMEE---DHLFRLNYAITLFNNEEVERAALHFAEFELLFEKLDEEARNADPEVAEQRAALQEALG 295

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BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Match: A0A067C533_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C533_SAPPC)

HSP 1 Score: 117 bits (293), Expect = 4.460e-29
Identity = 63/103 (61.17%), Postives = 79/103 (76.70%), Query Frame = 0

Query:    1 SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAER--DQDVLARSQALENSL 101
            SAAINLKPDF +SYMYLAITL RL+DF+NACSAYDKA+E++    D++ HLNYA+TL NNDE ERA   +  F+ IFE LD +A R  D +V+ + QAL N+L
Sbjct:  320 SAAINLKPDFPSSYMYLAITLGRLDDFENACSAYDKAIEMEA---DHMFHLNYALTLFNNDELERAKVQFNKFEAIFETLD-EATRSSDPEVMDQRQALLNAL 418

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig19067.6068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LKV4_ECTSI	5.760e-62	96.19	Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LAG9_9PHAE	5.180e-53	92.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A812V4P0_SYMMI	6.000e-32	53.85	BBS4 protein (Fragment) n=1 Tax=Symbiodinium micro...	[more]
K3WTZ6_GLOUD	4.590e-30	60.78	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
A0A397BJC2_9STRA	9.660e-30	61.76	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A397C771_9STRA	1.050e-29	61.76	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A397DQ18_9STRA	1.230e-29	61.76	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
D0MXK6_PHYIT	2.440e-29	59.80	Sporangia induced Bardet-Biedl syndrome 4 protein ...	[more]
A0A7S2IJK4_9EUKA	3.990e-29	57.28	Hypothetical protein n=1 Tax=Haptolina brevifila T...	[more]
A0A067C533_SAPPC	4.460e-29	61.17	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..102 e-value: 9.9E-14 score: 53.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 2..75
None	No IPR available	PANTHER	PTHR44186:SF1	BARDET-BIEDL SYNDROME 4 PROTEIN	coord: 1..101
None	No IPR available	PANTHER	PTHR44186	FAMILY NOT NAMED	coord: 1..101
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..44 score: 12.292
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 11..44 score: 8.408

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig19067	contig	Ecto-sp13_S_contig19067:320..2320 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig19067.6068.1	mRNA_Ecto-sp13_S_contig19067.6068.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig19067 320..2320 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig19067.6068.1 ID=prot_Ecto-sp13_S_contig19067.6068.1|Name=mRNA_Ecto-sp13_S_contig19067.6068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
SAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKAVELDGGGGDYLTH
LNYAVTLLNNDEPERAAEHYASFKKIFEALDPDAERDQDVLARSQALENS
LGASS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat