mRNA_Ecto-sp13_S_contig19035.6046.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: D7FK12_ECTSI (Outer dynein arm docking complex protein like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK12_ECTSI) HSP 1 Score: 345 bits (886), Expect = 1.880e-113 Identity = 189/198 (95.45%), Postives = 191/198 (96.46%), Query Frame = 1
Query: 1 HTEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRKNAREGGGRGKGRGGRGR 594
HTEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAA AL ASG+EHGGGEDDLGMGR LAVG XXXX AVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRKNAREGGGRGKGRGGRG+
Sbjct: 439 HTEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAAALMASGSEHGGGEDDLGMGRTLAVGXXXXXXXXAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRKNAREGGGRGKGRGGRGK 636
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: A0A7S2W848_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W848_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.150e-34 Identity = 76/185 (41.08%), Postives = 115/185 (62.16%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRKNAREG 558
TE +K++++C + TI++LK G+Q++F ++ G + +S SVT++N++ FLG+IE++ N +LQ +A +++E+ R A G GE+ G R AAV VLG GP TPM QELIHVNPPKL+D+SS E S ++D+ RPLTRDELK +TLN++ R+ + G
Sbjct: 150 TETMVDKFDMKCQDTQKTIESLKRGIQSMFNKLECG--VDTMLSDSSVTEANVLQFLGLIEQRANEVLQQYAVFQQKERERQAVAA--------EGDGEEPEGEARDTVGSLAAASSRAAVLQVLGAGPTTPMGQELIHVNPPKLDDYSSDEGSSEEEDETRPLTRDELKAKTLNRMHRRGGKGG 324
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: A0A7S1XXH8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXH8_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.940e-29 Identity = 79/185 (42.70%), Postives = 112/185 (60.54%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVAT-----VLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRK 543
TE+ +EKYE +C +AS T++ LK G+Q+ F + G ++ + +S +VT++NMMTFLGM E++ N +LQA+A + R++ R A A ++D+ + A G A T +LG GP TPM +LIHVNPPKLED+S + G DDDD RPLTRDELK RT N I ++
Sbjct: 409 TESMAEKYEHKCVDASATLERLKRGIQSTFKNIECG-SMSDMISESTVTETNMMTFLGMCEQRANEILQAYAFVQRRDQERT----AKMA--------QEDM-EAEMDAAAQGAAERAAQEGTTSMMQMLGTGPMTPMGHDLIHVNPPKLEDYSEVDVDG-DDDDERPLTRDELKARTQNSISKR 578
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: A0A225X440_9STRA (Outer Dynein Arm Docking Complex n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X440_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.310e-28 Identity = 75/185 (40.54%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRV-FGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARA--KEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEE-SGSDDDDARPLTRDELKGRTLNKIQRKN 546
TE A+EK E RC+EA T++A+K +QNLF ++ +A+ E + VT++NMM +LG+IE+KTN +L +A A K++E R N A + G + G A + ++LG GP TPM QE + +NPP L+D+SS +E SG ++D PLTRDELK RTL ++R N
Sbjct: 447 TEQAAEKCEARCAEAQKTVNAVKRAIQNLFTKIGCNAQAMVEMLGDSVVTEANMMAYLGVIEQKTNEILHQYAAAMAKQQEDARKNKATSDAYDRESQFAANAMSGNPTAVGAAGGTKGAVATLHSILGVGPITPMGQEPLQINPPNLDDYSSEDEDSGDNEDTMHPLTRDELKVRTLKGMRRLN 631
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: A0A7S3GTF5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTF5_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.770e-27 Identity = 81/190 (42.63%), Postives = 109/190 (57.37%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRVF---GGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAA-GA----LFASGTEHG--GGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRK 543
+EA + KYE RC + ++LK G+Q++F + GE LP V VT+ NM+ LG+IE+K N LLQ ++R ++ + +AA GA ASG H G DD + G A + +VLG GP+ PM Q+L+ VNPPK ED+ S E G DD D RPLTRDELK RTLNK+ +K
Sbjct: 396 SEAMAAKYEQRCQDLQRITESLKRGMQSIFSKFDFDQDGEGLPPPV----VTEVNMVQNLGLIEQKANLLLQHYSRVRQLLQAPPSAAKGASRTPFGASGAHHAHNAGMDDFDLEDPHGPGG---EMSANLVSVLGTGPKVPMGQDLLRVNPPKSEDYRSDESDGDDDGDTRPLTRDELKQRTLNKLTKK 578
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: H3H449_PHYRM (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3H449_PHYRM) HSP 1 Score: 112 bits (281), Expect = 2.020e-25 Identity = 70/183 (38.25%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRV-FGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEE-SGSDDDDARPLTRDELKGRTLNKIQRKN 546
TE A+EK E RC+EA T++A+K +Q+LF + +A+ E + VT++NMM +LG+IE+KTN +L +A +++ A+ + + G + G AA+ ++LG GP TPM QE + +NPP L+D+SS +E SG ++D PLTRDELK RTL ++R N
Sbjct: 407 TEQAAEKCESRCAEAQKTVNAVKRAIQSLFTKTGCNAQAMVEMLGDSVVTEANMMAYLGVIEQKTNEILHHYAAVIAKQQADAHKNKTTSDTYDRESQFAANAMSGNPVRTAGGTNGAAAALHSILGVGPITPMGQEPLQINPPNLDDYSSEDEDSGDNEDTMHPLTRDELKVRTLKGMRRLN 589
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: G4YQT7_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YQT7_PHYSP) HSP 1 Score: 111 bits (278), Expect = 5.180e-25 Identity = 71/185 (38.38%), Postives = 108/185 (58.38%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRV-FGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGS--GNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEE-SGSDDDDARPLTRDELKGRTLNKIQRKN 546
TE A+EK E RC+EA T++A+K +Q+LF + +A+ E + +VT++NMM +LG+IE+KTN +L +A +++ A + + AVG+ G A + ++LG GP TPM QE + +NPP L+D+SS +E SG ++D PLTRDELK RTL ++R N
Sbjct: 408 TEQAAEKCEARCAEAQKTVNAVKRAIQSLFTKTGCNAQAMVEMLGDSAVTEANMMAYLGVIEQKTNEILHQYAAVLAKQQADAQKNKTTTDAYDRESQFAANAMSNNSAAVGAAGGTNGAVATLHSILGVGPITPMGQEPLQINPPNLDDYSSEDEDSGDNEDTMHPLTRDELKVRTLKGMRRLN 592
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: A0A0P1AYX1_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYX1_PLAHL) HSP 1 Score: 110 bits (275), Expect = 1.230e-24 Identity = 74/186 (39.78%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 1 HTEAASEKYEVRCSEASLTIDALKDGVQNLFGRV-FGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDD-LGMGRVLAVGS--GNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRKN 546
HTE A+EK E RC+EA +DA+K + +LF ++ + E V +VTD+N+MT+LG+IE+KTN +LQ +A AL A + + D L +AVG+ G A + ++LG P PM QE + +NPP L D+SS E G DD P TRDELK RTL ++R N
Sbjct: 393 HTEQAAEKCEARCAEAQQRVDAIKGAIHHLFTKIECNTHLMVELVGDSNVTDANLMTYLGVIEQKTNEILQQYA--------------ALVAIDVQSNKVQSDILDQAASVAVGAAGGTNGAVAKLHSILGVRPIAPMGQEPLQINPPNLNDYSSDE--GDTDDGMHPFTRDELKARTLKGMRRTN 562
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: F0Y5D3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5D3_AURAN) HSP 1 Score: 108 bits (271), Expect = 4.190e-24 Identity = 66/180 (36.67%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEESGSDDDDARPLTRDELKGRTLNKIQRK 543
TEA + KYE +C E ID+LK + + F + A E + SVT++NM+++L +IEE+ N++++ + K R+ + +A A A A +VLG GP TPM Q+LIHVNPPKLED+SS + + RPLTRDELK +TLN++ R+
Sbjct: 399 TEANASKYESKCEEYQAVIDSLKKAIASAFTKTQCERASSEIFADSSVTEANMLSYLAIIEEQCNTIIKDYVAVKARQHKQTSAEAADVAGA--------------------------APPPSVLGMGPTTPMGQDLIHVNPPKLEDYSSEXXXXXXEGETRPLTRDELKAKTLNRMYRR 552
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Match: A0A329RTY9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A329RTY9_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.890e-23 Identity = 69/183 (37.70%), Postives = 106/183 (57.92%), Query Frame = 1
Query: 4 TEAASEKYEVRCSEASLTIDALKDGVQNLFGRV-FGGEALPETVSGGSVTDSNMMTFLGMIEEKTNSLLQAFARAKEREKVRANAAGALFASGTEHGGGEDDLGMGRVLAVGSGNXXXXAAVATVLGHGPQTPMRQELIHVNPPKLEDFSSSEE-SGSDDDDARPLTRDELKGRTLNKIQRKN 546
TE A+EK E RC+EA T++ +K +Q+LF + + + E + VT++NMM +LG+IE+KTN +L +A +++ A+ + ++ E V A G G A + ++LG GP PM QE + +NPP L+D+SS +E SG ++D PLTRDELK RTL ++R N
Sbjct: 405 TEQAAEKCEARCAEAQKTVNTVKRAIQSLFTKTGCNAQVMVEMLGDSVVTEANMMAYLGVIEQKTNEILHQYAAVVTKQQADAH----KNKTTSDAYDRESQFTAAAVGAAG-GTNGAVATLHSILGVGPIAPMGQEPLQINPPNLDDYSSEDEDSGDNEDTMHPLTRDELKVRTLKGMRRLN 582 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19035.6046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19035.6046.1 >prot_Ecto-sp13_S_contig19035.6046.1 ID=prot_Ecto-sp13_S_contig19035.6046.1|Name=mRNA_Ecto-sp13_S_contig19035.6046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp HTEAASEKYEVRCSEASLTIDALKDGVQNLFGRVFGGEALPETVSGGSVTback to top mRNA from alignment at Ecto-sp13_S_contig19035:578..2308+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19035.6046.1 ID=mRNA_Ecto-sp13_S_contig19035.6046.1|Name=mRNA_Ecto-sp13_S_contig19035.6046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1731bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19035:578..2308+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19035:578..2308+ >mRNA_Ecto-sp13_S_contig19035.6046.1 ID=mRNA_Ecto-sp13_S_contig19035.6046.1|Name=mRNA_Ecto-sp13_S_contig19035.6046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19035:578..2308+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |