prot_Ecto-sp13_S_contig19031.6043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19031.6043.1
Unique Nameprot_Ecto-sp13_S_contig19031.6043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19031.6043.1 vs. uniprot
Match: D7G484_ECTSI (Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G484_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 5.700e-62
Identity = 106/123 (86.18%), Postives = 108/123 (87.80%), Query Frame = 0 
Query:    1 MLRQVLAQCEAAFLAGIEDATTPGSVPSSSXXXXXXXXXXXAGPKQLSAKSAPLEGLRRFSHDGTDGVFMGAAGVPVRYRLFPKYSEGEGDGGGKLQPGVVLLTGLMESMTKYGETIAHLNDR 123
            MLRQVLAQCEAAFLAG EDATTPGSVPSSS            GPKQLSAKSAPLEGLRRFS DGTDGVFMGAAGVPVRYRLFPKYS+GEGDG GKLQPGV+LLTGLMESMTKYGETIAHLNDR
Sbjct:    1 MLRQVLAQCEAAFLAGTEDATTPGSVPSSSSASETAAAAP--GPKQLSAKSAPLEGLRRFSRDGTDGVFMGAAGVPVRYRLFPKYSKGEGDGCGKLQPGVILLTGLMESMTKYGETIAHLNDR 121
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19031.6043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G484_ECTSI5.700e-6286.18Lysophospholipase l2 pldb, hydrolase of alpha/beta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19031contigEcto-sp13_S_contig19031:499..1862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19031.6043.1mRNA_Ecto-sp13_S_contig19031.6043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19031 440..2047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19031.6043.1 ID=prot_Ecto-sp13_S_contig19031.6043.1|Name=mRNA_Ecto-sp13_S_contig19031.6043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MLRQVLAQCEAAFLAGIEDATTPGSVPSSSSTSETAAAAAAAGPKQLSAK
SAPLEGLRRFSHDGTDGVFMGAAGVPVRYRLFPKYSEGEGDGGGKLQPGV
VLLTGLMESMTKYGETIAHLNDRRAGS*
back to top