mRNA_Ecto-sp13_S_contig18979.6014.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: D7G9A6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9A6_ECTSI) HSP 1 Score: 158 bits (400), Expect = 3.030e-43 Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETVAY 249
WK+VAALDYPD KVFVLDDGASDEVKALAS FGFEYVLRSNAPELKKAGNLRNAF +TSGEAIAIFDADFCPRP+FLKETV Y
Sbjct: 743 WKYVAALDYPDFKVFVLDDGASDEVKALASVFGFEYVLRSNAPELKKAGNLRNAFAMTSGEAIAIFDADFCPRPEFLKETVPY 825
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: D7G9A2_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A2_ECTSI) HSP 1 Score: 152 bits (385), Expect = 3.200e-41 Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETVAY 249
W+HVAALDYPD KVFVLDDGASDEV ALASKFGFEYV+R +AP LKKAGNLRNAF TSGEAIAIFDADFCPRPDFLKETV Y
Sbjct: 782 WQHVAALDYPDFKVFVLDDGASDEVAALASKFGFEYVVREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRPDFLKETVPY 864
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: D7G9A1_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A1_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.580e-37 Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETVAY 249
WK+VAALDYPD KVFVLDDGAS+ +ALAS FGFEYVLR++ P LKKAGNLRNAF TSGEAIAIFDADFCPR DFLKETV Y
Sbjct: 501 WKYVAALDYPDFKVFVLDDGASEGAQALASTFGFEYVLRADVPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPY 583
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.110e-33 Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETVAY 249
W HV A+DYP + V VLDDGA DEVKALA ++GF+Y+ R N PELKKAGNLR+AF TSGE I IFDADFCPRPDFL+ET+ Y
Sbjct: 471 WNHVLAMDYPHVTVHVLDDGAKDEVKALAGEYGFQYIRRDNRPELKKAGNLRHAFARTSGEVIVIFDADFCPRPDFLRETLPY 553
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: A0A6H5K7X7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X7_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.150e-33 Identity = 73/122 (59.84%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEY---------------------------------------VLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETVAY 249
W+HVAALDYPD KVFVLDDGASDEVKALASKFGFE VLR +AP LKKAGNLRNAF TSGEAIAIFDADFCPR DFLKETV Y
Sbjct: 845 WQHVAALDYPDFKVFVLDDGASDEVKALASKFGFESRYVPSPIVTYFVLSRPPYRYCSMLLPDAATHCCRGIAEDVLREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPY 966
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: A0A1X7RRC4_ZYMTR (Glyco_trans_2-like domain-containing protein n=3 Tax=Zymoseptoria TaxID=1047167 RepID=A0A1X7RRC4_ZYMTR) HSP 1 Score: 117 bits (292), Expect = 9.990e-29 Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 1 WKHVAALDYPDLKV--FVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETV 243
WKHVAA+ YP LK+ VLDDGA DEVK+LA+ FGF Y++R + P LKK+GNLRNAF TSG+ +FDADFCPRPDFL+E +
Sbjct: 250 WKHVAAMRYPGLKMQPVVLDDGAQDEVKSLAATFGFRYIVRDDRPLLKKSGNLRNAFNHTSGDYFVVFDADFCPRPDFLEELI 332
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: A0A6A6WJ94_9PEZI (Glyco_trans_2-like domain-containing protein n=1 Tax=Pseudovirgaria hyperparasitica TaxID=470096 RepID=A0A6A6WJ94_9PEZI) HSP 1 Score: 113 bits (282), Expect = 2.550e-27 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 WKHVAALDYPD--LKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKE 237
W HV+AL YP+ +KV+VLDDGA D VKALA+KFG+ Y++R N P LKKAGNLR AF T +IFDADFCPRPDFL E
Sbjct: 435 WNHVSALQYPEGKIKVWVLDDGADDNVKALATKFGYNYIVRDNRPHLKKAGNLRYAFARTEAPFFSIFDADFCPRPDFLLE 515
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: A0A423W1P2_9PEZI (Glyco_trans_2-like domain-containing protein n=4 Tax=Valsa TaxID=83174 RepID=A0A423W1P2_9PEZI) HSP 1 Score: 111 bits (278), Expect = 7.910e-27 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 1
Query: 1 WKHVAALDYP--DLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKE 237
WKHV ALD+P ++V VLDDGA D V+ LA ++GFEY++R + P LKKAGNLR AF T+G+ AIFDADFCPRPDFL+E
Sbjct: 235 WKHVTALDWPADKIRVHVLDDGAKDTVRRLAGQYGFEYMVRDDRPRLKKAGNLRWAFARTTGDFFAIFDADFCPRPDFLRE 315
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: A0A8H4R1D6_9AGAR (Glyco_trans_2-like domain-containing protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4R1D6_9AGAR) HSP 1 Score: 110 bits (276), Expect = 1.630e-26 Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETVAY 249
+K+VA L YP+ KV+VLDDG D VKALA +FGF Y+ R + P LKKAGNLR AF T G+ AIFDADFCPR DFL E + Y
Sbjct: 400 YKYVAQLQYPNFKVYVLDDGGLDTVKALAERFGFNYISRDDKPHLKKAGNLRYAFARTKGDFFAIFDADFCPRRDFLDEMLPY 482
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Match: A0A8H6I364_9AGAR (Nucleotide-diphospho-sugar transferase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6I364_9AGAR) HSP 1 Score: 109 bits (272), Expect = 3.920e-26 Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 1 WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNLRNAFGITSGEAIAIFDADFCPRPDFLKETV 243
+K+VA +DYP+LKV+VLDDG D VK LA+ +GF Y+ R N PELKKAGNLR AF T G+ IFDADFCPR D LK+ +
Sbjct: 129 YKYVAKIDYPNLKVWVLDDGGMDSVKRLATAYGFNYICRDNRPELKKAGNLRYAFTRTEGDFFLIFDADFCPRADILKDMI 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18979.6014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18979.6014.1 >prot_Ecto-sp13_S_contig18979.6014.1 ID=prot_Ecto-sp13_S_contig18979.6014.1|Name=mRNA_Ecto-sp13_S_contig18979.6014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp WKHVAALDYPDLKVFVLDDGASDEVKALASKFGFEYVLRSNAPELKKAGNback to top mRNA from alignment at Ecto-sp13_S_contig18979:1749..3325+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18979.6014.1 ID=mRNA_Ecto-sp13_S_contig18979.6014.1|Name=mRNA_Ecto-sp13_S_contig18979.6014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1577bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18979:1749..3325+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18979:1749..3325+ >mRNA_Ecto-sp13_S_contig18979.6014.1 ID=mRNA_Ecto-sp13_S_contig18979.6014.1|Name=mRNA_Ecto-sp13_S_contig18979.6014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18979:1749..3325+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |