mRNA_Ecto-sp13_S_contig18977.6013.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A6H5K9S3_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9S3_9PHAE) HSP 1 Score: 515 bits (1327), Expect = 1.040e-182 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 1
Query: 4 QVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 750
+VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSI LEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP
Sbjct: 147 KVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSISLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 395
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A835YPE5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPE5_9STRA) HSP 1 Score: 354 bits (909), Expect = 1.340e-119 Identity = 168/249 (67.47%), Postives = 198/249 (79.52%), Query Frame = 1
Query: 7 VDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDK-SPLVSVKYAMP 750
VDIIISEWMGYFLLRESMLDS+VRARDRWL PGGLMFPS TM WGLV+DE+DRL+K EY+++ Q+W+ FK E +++Y DM VLE VYEEEQ+GYYILSSFWAEL DQ +G+ +++ FDMHTCTLEDVQGV+ET I +E D RVSGFAGWFTADF GTEANP P PV LST P+NGYTHWGQQVF+L+VPH V GG VEGT+A+ RQKEN+RLYDV +KH+ + E P+ Y MP
Sbjct: 117 VDIIISEWMGYFLLRESMLDSVVRARDRWLAPGGLMFPSHATMYWGLVSDEEDRLAKAAEYLQSTQEWHRFKREMRQYYDCDMNVLEGVYEEEQKGYYILSSFWAELQPDQCVGQGAMIKHFDMHTCTLEDVQGVEETPFRINVEHDCRVSGFAGWFTADFRGTEANPLPVPVLLSTAPDNGYTHWGQQVFYLEVPHWVPRGGAVEGTLALTRQKENIRLYDVGVKHRRHGNSQEPNLGPMQEATYTMP 365
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A7S2V4Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q5_9STRA) HSP 1 Score: 275 bits (703), Expect = 7.720e-88 Identity = 139/256 (54.30%), Postives = 176/256 (68.75%), Query Frame = 1
Query: 1 KQVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPL-EEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHK----NVLP-TGEDKSPLVSVKYAMP 750
++VDIIISEWMGYFLLRESM+DSL++ARDR+L P GL+FPS TM W + E++RL KQQEYI+++Q+W++FK ETKE YG+ M LEA YE+EQR YYI ++ W+EL DQV+ P ++ D+HTCT + GV E P + RVSGFAGWFT DF G V LSTGPE GYTHWGQQVF+L P D+ G K+ GT ++RQKEN+RLYD+Y+ HK LP GE + V KY +P
Sbjct: 152 EKVDIIISEWMGYFLLRESMVDSLIKARDRFLKPDGLLFPSHATMYWAPICFEEERLGKQQEYIQSLQEWHNFKAETKERYGITMATLEADYEQEQRHYYINTASWSELHPDQVVCPPQAIKHLDLHTCTQPEAAGVAELPFCFPCGTQPTRVSGFAGWFTTDFKGRVGRSLGSEVVLSTGPEAGYTHWGQQVFYLAQPLDLQPGDKILGTFRMERQKENIRLYDLYLTHKVKRAAPLPGNGEAEDQPVVTKYELP 407
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A812S7V0_SYMMI (PRMT10 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7V0_SYMMI) HSP 1 Score: 258 bits (659), Expect = 3.290e-82 Identity = 122/226 (53.98%), Postives = 161/226 (71.24%), Query Frame = 1
Query: 4 QVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYI 681
QVDIIISEWMGYFLLRESMLDS++RAR++W+ PGG MFPS TM+ G +++EQDR K +Y ++M +W+ FK E +EFY VDM +LE + +EQ YYI SS W EL ++ V+G+PVVV+ D++TC LED GV T + R SGFAGWFT DF G+ NP VTLSTGPE GYTHWGQQVF+ + + V G + GT+++ RQ++N RLY++ +
Sbjct: 88 QVDIIISEWMGYFLLRESMLDSVIRARNKWMKPGGSMFPSTATMLLGCISNEQDREGKFDDYSQSMHEWHMFKQEMQEFYQVDMNILEPKFTKEQEDYYIYSSLWTELSQEHVIGQPVVVKRLDLNTCALEDALGVAPTEYRFDVPYPVRASGFAGWFTVDFAGSVENPAEKRVTLSTGPEMGYTHWGQQVFYWKEAVNCVPGTVISGTMSLVRQEKNKRLYNMEV 313
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: W7TTE4_9STRA (Ribosomal L11 methyltransferase, PrmA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE4_9STRA) HSP 1 Score: 259 bits (663), Expect = 9.800e-82 Identity = 136/256 (53.12%), Postives = 171/256 (66.80%), Query Frame = 1
Query: 7 VDIIISEWMGYFLLRESMLDSLVRARDRWLVP-GGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPL-----EEDARVSGFAGWFTADFHGTEAN--PCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 750
VDII+SEWMGYFLLRESMLDSLVR R+++L GG MFPS TM W L+ DE++R K+QEY + ++DW +F +TKEFY +DM L A YEEEQ+ YY+LSS WAEL +QV+ EPVV++ D+ +CT E+++GV ET + E VSGFAGWFT DF G P P P TLST P+ GYTHWGQQVFH+ V ++ G VEGT+ + RQ EN RLY V + + + G S LV KY MP
Sbjct: 160 VDIIVSEWMGYFLLRESMLDSLVRVREKYLKKEGGHMFPSHATMYWALIEDERERQVKEQEYQQALEDWQTFSHQTKEFYDLDMAGLTAQYEEEQKEYYLLSSSWAELRAEQVVAEPVVIRRLDLKSCTFEEIKGVPETPFQFVIPPNDNNEPVYVSGFAGWFTTDFFGNAPGIEPLPHPTTLSTAPDVGYTHWGQQVFHVVVGLELFPGDVVEGTVTLVRQVENARLYHVEVAFQ--VRRGGVTSKLVRHKYQMP 413
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A482SBI8_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI8_9ARCH) HSP 1 Score: 236 bits (603), Expect = 3.240e-73 Identity = 113/226 (50.00%), Postives = 151/226 (66.81%), Query Frame = 1
Query: 4 QVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYI 681
QVDIIISEWMGY LLRESMLDS++RAR+RWL P G MFPS TM ++ E DR K E+ +M+DW F E K +Y VD+ L + +EQ YY+ S W EL + V+G+PV+++ D++TCTL+D +GVD I + +A VSGFAGWFT DF+G+ +P V LSTGPE G THWGQQVF+L+ D G + G +A+ RQ++N RLY++ +
Sbjct: 130 QVDIIISEWMGYILLRESMLDSVIRARNRWLKPDGAMFPSHATMYLSAISYEDDRQCKIDEFTSSMRDWKVFSEEMKHYYNVDVGALTNTFHKEQEEYYVYSGLWTELKTEHVVGQPVIIKKLDLNTCTLKDAEGVDTVPYDIEIPFNATVSGFAGWFTVDFNGSVPSPVNKRVVLSTGPEAGNTHWGQQVFYLKEAVDCTPGTHLHGKVAMVRQEKNKRLYNLVL 355
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: D7FL25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL25_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.940e-71 Identity = 120/252 (47.62%), Postives = 159/252 (63.10%), Query Frame = 1
Query: 1 KQVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPLEEDAR-VSGFAGWFTADFHGTEA-NPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 750
++VD+I+SEWMGYFLLRESMLDS+V ARD+WL G+MFPS TM+W V+D + + +Y ++ W +F + YGVDM+ L+ YEEE G + LSS W EL QV+ EPV V+ D+HTC+LED +G+ +T S PL + A V+GFAGWF F G + P PV ST P GYTHWGQQVF+LQ P VEGT+++ RQ N RLY+V ++H+ +G S VS Y +P
Sbjct: 263 EKVDVIVSEWMGYFLLRESMLDSVVVARDKWLKDTGVMFPSHATMVWAPVDDGDQKYRRDTDYQNSLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSEPVTVKELDLHTCSLEDTKGLAKTLFSFPLRDGAPPVTGFAGWFDVSFRGRDGVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDATVEGTVSMVRQANNPRLYNVKVEHRLSFASGTTDSQQVSSVYKIP 514
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A6H5K1X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X3_9PHAE) HSP 1 Score: 226 bits (576), Expect = 5.900e-68 Identity = 112/227 (49.34%), Postives = 146/227 (64.32%), Query Frame = 1
Query: 1 KQVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSIPLEEDAR-VSGFAGWFTADFHGT-EANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDV 675
++VD+I+SEWMGYFLLRESMLDS+V ARD+WL G+MFPS TM+W V+D + + +Y ++ W +F + YGVDM+ L+ YEEE G + LSS W EL QV+ +PV V+ D+HTC+LED +G++ T S PL A V+GFAGWF F G E P PV ST P GYTHWGQQVF+LQ P +EGT+++ RQ N RLY+V
Sbjct: 209 EKVDVIVSEWMGYFLLRESMLDSVVVARDKWLKDTGVMFPSHATMVWAPVDDADQKYRRDTDYQNSLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSDPVTVKALDLHTCSLEDTRGLENTLFSFPLRNGAPPVTGFAGWFDVSFRGRDEVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDATIEGTVSMVRQANNPRLYNV 435
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A7S1GNB2_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB2_CYCTE) HSP 1 Score: 220 bits (561), Expect = 6.710e-68 Identity = 122/241 (50.62%), Postives = 152/241 (63.07%), Query Frame = 1
Query: 7 VDIIISEWMGYFLLRESMLDSLVRARDRWLVPG-GLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDE--TNVSIPLEEDAR-----VSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVYI 681
VD+++SEWMGYFLLRESMLDSLVRARD++L P GLMFPS TM + V DE +R QEY +M DWY F TK YGVDM+VLE +E EQ+ YY+LSS W+EL + VL EP VV+ DM CT+ED +G+ + + E D +SGFAGWFTADF G A P LSTGPENGYTHWGQQ F+L ++ G ++ G + + R K+N RLY+ I
Sbjct: 24 VDVMVSEWMGYFLLRESMLDSLVRARDKFLKPATGLMFPSHTTMYFAPVMDEDERKITAQEYSNSMSDWYEFASSTKAVYGVDMSVLENEFEREQKEYYLLSSRWSELAPEAVLAEPTVVKHLDMCACTIEDSRGIIKGAPHSGFEFEIDGSEVAGPISGFAGWFTADFKSRTDEDGANAPKLLQPAFLSTGPENGYTHWGQQTFYLPSSIPLMRGQTTRLSGHLEMMRTKQNARLYNCRI 264
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Match: A0A7S2JSG2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSG2_9STRA) HSP 1 Score: 223 bits (568), Expect = 2.170e-67 Identity = 124/245 (50.61%), Postives = 155/245 (63.27%), Query Frame = 1
Query: 7 VDIIISEWMGYFLLRESMLDSLVRARDRWLVPG-GLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGV---DETN-----VSIPLEEDARVSGFAGWFTADF------HGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVE--GTIAVKRQKENVRLYDVYIKHK 690
VDII+SEWMGYFLLRESMLDSL+RARD++L P GLMFPS CTM + DE++R EY TMQDW F TK YGVDM+ LEA ++ EQ YY+LSS WAEL + +L E V+ DM TCT+E+ +G+ DE + +S ++ A +SGFAGWFT+DF +G +A P L TGPE GYTHWGQQVFHL V+ KV G + + R KEN RLY+ + K
Sbjct: 148 VDIIVSEWMGYFLLRESMLDSLIRARDKFLKPRTGLMFPSHCTMYVAPITDEEERYQSCAEYANTMQDWSQFVETTKSTYGVDMSCLEAPFDREQNEYYLLSSKWAELKPNAILAEAQPVKMLDMITCTIEESRGLALFDELSSFDFDISDDYKDGAPISGFAGWFTSDFKSRTDANGADAPKLMSPAFLDTGPEAGYTHWGQQVFHLLSSIPVLPDQKVRIYGNLELMRTKENARLYNCRFRFK 392 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18977.6013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18977.6013.1 >prot_Ecto-sp13_S_contig18977.6013.1 ID=prot_Ecto-sp13_S_contig18977.6013.1|Name=mRNA_Ecto-sp13_S_contig18977.6013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp MGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQback to top mRNA from alignment at Ecto-sp13_S_contig18977:36..2983- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18977.6013.1 ID=mRNA_Ecto-sp13_S_contig18977.6013.1|Name=mRNA_Ecto-sp13_S_contig18977.6013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18977:36..2983- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18977:36..2983- >mRNA_Ecto-sp13_S_contig18977.6013.1 ID=mRNA_Ecto-sp13_S_contig18977.6013.1|Name=mRNA_Ecto-sp13_S_contig18977.6013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18977:36..2983- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |