mRNA_Ecto-sp13_S_contig18970.6011.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18970.6011.1
Unique NamemRNA_Ecto-sp13_S_contig18970.6011.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A6H5KVG2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG2_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 8.710e-89
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 
Query:    1 MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGET 399
            MSENDLV+ESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGET
Sbjct:  185 MSENDLVVESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGET 317
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: D7FJD0_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD0_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 3.540e-87
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 1 
Query:    1 MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETG 402
            MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKY MTGETG
Sbjct:  241 MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYAMTGETG 374
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A6H5JJZ2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ2_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.690e-32
Identity = 61/135 (45.19%), Postives = 89/135 (65.93%), Query Frame = 1 
Query:    4 SENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            +E  L  E  +L+ L HPN+  +LG G T  G +F+V+EYL  GTLR R+D   GGLG  P V++ ++LAS ++Y+HD  +PG+ ++HRDLKPDN+GF  +   KL+D GLAK+I  ++      Y M+GE G +
Sbjct:  132 AERGLNSELSLLQNLTHPNLTMVLGAGQTPKGRTFVVMEYLDRGTLRARMDAARGGLGFWPGVRHAVELASVMAYLHDDAMPGMCILHRDLKPDNLGFRGNVM-KLVDLGLAKVIKHSEAGVDEFYRMSGEVGSL 265
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: D8LJM0_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM0_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 7.340e-32
Identity = 69/137 (50.36%), Postives = 87/137 (63.50%), Query Frame = 1 
Query:    1 MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRL-DKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            ++ NDL +E L+L+ELHH NIV +LG G    G  F+ LEYLS GTL   L +     + +   +   L L +AL Y+HD  +PG I+ HRDLKPDNIGFA DG  KL+DFGL KII R  R  + KY MTG TG +
Sbjct:  382 VAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMRISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSL 518
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A6H5JJI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI7_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 7.790e-32
Identity = 69/137 (50.36%), Postives = 87/137 (63.50%), Query Frame = 1 
Query:    1 MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRL-DKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            ++ NDL +E L+L+ELHH NIV +LG G    G  F+ LEYLS GTL   L +     + +   +   L L +AL Y+HD  +PG I+ HRDLKPDNIGFA DG  KL+DFGL KII R  R  + KY MTG TG +
Sbjct:  429 VAANDLEVEMLLLKELHHDNIVSLLGAGFLPDGRRFVALEYLSGGTLSSLLREHREKPMRISKVLDLSLALCNALEYLHDVAVPGRIVCHRDLKPDNIGFAQDGTLKLIDFGLGKIIKRKFRVRAEKYHMTGGTGSL 565
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A836CC53_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC53_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.190e-24
Identity = 55/135 (40.74%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:    4 SENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            S NDL +E ++L+EL HPNI  ++ GG T TG  F+ +E L  G+L   +D           + Y   +A A S++H+  + G I++HRDLKPDN+ F +D + K++DFGLAK++ R     S  YTMT +TG +
Sbjct:  308 SANDLELEMVLLKELGHPNICAMMFGGKTPTGTPFMAMEPLMGGSLTKVVDNMSRFAPWTQGLHYARDIACAFSFLHEEAIAGHIVIHRDLKPDNVCFTSDMKLKIVDFGLAKVVRRKYANLSEAYTMTSQTGSL 442
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.640e-23
Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1 
Query:   10 NDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTL------------RGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            N++  E  +   L+H N+V ++G GTT  G  F+VLE L  G+L            R R       +     ++Y   +ASA+ Y H+  +PG  ++HRDLKPDNIGFA DG  K+ DFGLA+++  +      KY+M+GETG +
Sbjct:  244 NEIESEVAIHARLNHLNVVELIGAGTTSKGVRFVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDVLRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKYSMSGETGSL 388
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A7S3DX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX07_9STRA)

HSP 1 Score: 102 bits (255), Expect = 8.060e-23
Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 1 
Query:   10 NDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTL------------RGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            N++  E  V  +L+HPNIVG++G GTT     FI+LE L  GTL            R R             ++    +A A++Y+H+  + G I++HRDLKPDNIGF  DG  K++DFGLAKII          Y M+GETG +
Sbjct:  456 NEIEAELEVHSKLNHPNIVGLIGAGTTSKKVRFIILERLDGGTLTQMLGYDTRIRDRRRRFWKRKQFSFVDVLRIARSIAEAMTYLHESAIMGSIVLHRDLKPDNIGFTLDGTIKVLDFGLAKIIENASVTAKDVYQMSGETGSL 600
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: B5Y4X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4X7_PHATC)

HSP 1 Score: 102 bits (254), Expect = 1.150e-22
Identity = 58/145 (40.00%), Postives = 77/145 (53.10%), Query Frame = 1 
Query:   10 NDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTL------------RGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            N++  E  V   L+H NIV ++G GTT  G  F+VLE L  GTL            R R             ++    +A A+SY H   +PG +++HRDLKPDNIGF  DG  K++DFGLAKI+          YTM+GETG +
Sbjct:  418 NEIEGELAVHSRLYHTNIVALIGAGTTSKGVRFVVLERLDGGTLTQMLGYDTRIRDRRRRFWRRKQFSYVDVLRVARSIADAMSYCHQEAIPGCMVLHRDLKPDNIGFTLDGTVKIIDFGLAKIVENASVDSDDIYTMSGETGSL 562
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Match: A0A4D9DAK6_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAK6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.140e-22
Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 1 
Query:   34 VLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVG----------------PAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV 408
            +++ L+HPNIV  +  G      +F+V+E L  G+L  RL       GV                   +KY LQ+A AL YMHD  LPG  +MHRDLKPDN+GF ADG  K++DFGLAK I + +     K  MTGETG +
Sbjct:  243 LMQSLNHPNIVQYIASGWEPR--TFVVMERLEGGSLNQRLGFAPTHSGVHRNNFFTRDVRKAFSYESLLKYALQMAEALKYMHDEALPGYAVMHRDLKPDNVGFKADGTLKILDFGLAKAIPKDETARQ-KVRMTGETGSI 380
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18970.6011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVG2_9PHAE8.710e-8999.25Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FJD0_ECTSI3.540e-8799.25Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JJZ2_9PHAE2.690e-3245.19Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LJM0_ECTSI7.340e-3250.36Serine/threonine-protein kinase CTR1 n=1 Tax=Ectoc... [more]
A0A6H5JJI7_9PHAE7.790e-3250.36Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A836CC53_9STRA1.190e-2440.74Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7R9WTW5_9STRA4.640e-2337.93Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3DX07_9STRA8.060e-2340.00Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B5Y4X7_PHATC1.150e-2240.00Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A4D9DAK6_9STRA2.140e-2242.55Protein kinase domain-containing protein n=2 Tax=M... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18970contigEcto-sp13_S_contig18970:52..459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score271.9
Seed ortholog evalue1.6e-70
Seed eggNOG ortholog2880.D7FJD0
Model size408
KEGG koko:K14304
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
Exons1
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
Cds size408
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462968.272822-CDS-Ecto-sp13_S_contig18970:51..4591681462968.272822-CDS-Ecto-sp13_S_contig18970:51..459Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18970 52..459 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18970.6011.1prot_Ecto-sp13_S_contig18970.6011.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18970 52..459 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18970.6011.1

>prot_Ecto-sp13_S_contig18970.6011.1 ID=prot_Ecto-sp13_S_contig18970.6011.1|Name=mRNA_Ecto-sp13_S_contig18970.6011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
MSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGR
LDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFA
ADGQAKLMDFGLAKIIHRTQRCGSVKYTMTGETGKV
back to top

mRNA from alignment at Ecto-sp13_S_contig18970:52..459+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18970.6011.1 ID=mRNA_Ecto-sp13_S_contig18970.6011.1|Name=mRNA_Ecto-sp13_S_contig18970.6011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=408bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18970:52..459+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGAGAACGACCTGGTTATCGAGTCTCTCGTGCTGCGGGAGCTCCA
CCACCCCAACATCGTCGGCATCCTGGGAGGCGGGACCACCCACACCGGGG
CGAGCTTCATCGTGCTCGAGTACCTGTCGATGGGCACTCTGCGGGGCCGC
CTCGACAAGTGCGGCGGTGGTCTCGGAGTAGGGCCGGCCGTCAAGTACGG
CCTGCAGCTGGCGTCAGCACTGTCGTACATGCACGACGGTGGCCTGCCGG
GCATCATCCTGATGCACCGGGACCTGAAGCCCGACAACATCGGCTTCGCC
GCGGACGGCCAGGCCAAGCTCATGGACTTCGGGCTCGCCAAGATCATCCA
CCGCACGCAGCGGTGTGGGTCCGTCAAGTACACCATGACCGGGGAGACAG
GTAAGGTC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18970:52..459+

>mRNA_Ecto-sp13_S_contig18970.6011.1 ID=mRNA_Ecto-sp13_S_contig18970.6011.1|Name=mRNA_Ecto-sp13_S_contig18970.6011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=408bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18970:52..459+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGAGAACGACCTGGTTATCGAGTCTCTCGTGCTGCGGGAGCTCCA
CCACCCCAACATCGTCGGCATCCTGGGAGGCGGGACCACCCACACCGGGG
CGAGCTTCATCGTGCTCGAGTACCTGTCGATGGGCACTCTGCGGGGCCGC
CTCGACAAGTGCGGCGGTGGTCTCGGAGTAGGGCCGGCCGTCAAGTACGG
CCTGCAGCTGGCGTCAGCACTGTCGTACATGCACGACGGTGGCCTGCCGG
GCATCATCCTGATGCACCGGGACCTGAAGCCCGACAACATCGGCTTCGCC
GCGGACGGCCAGGCCAAGCTCATGGACTTCGGGCTCGCCAAGATCATCCA
CCGCACGCAGCGGTGTGGGTCCGTCAAGTACACCATGACCGGGGAGACAG
GTAAGGTC
back to top