mRNA_Ecto-sp13_S_contig18951.6002.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18951.6002.1
Unique NamemRNA_Ecto-sp13_S_contig18951.6002.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: D7G173_ECTSI (Bardet-Biedl syndrome 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G173_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 8.770e-163
Identity = 235/240 (97.92%), Postives = 238/240 (99.17%), Query Frame = 1 
Query:    1 MSSSKADEVVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            MSSSKADEVVWQDREVRFDSTPAEMQCRKGEV+IDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQL+TLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETS HSGGYILG R+
Sbjct:    1 MSSSKADEVVWQDREVRFDSTPAEMQCRKGEVVIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLLTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSVHSGGYILGFRL 240
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: F0YFS0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFS0_AURAN)

HSP 1 Score: 364 bits (935), Expect = 1.060e-123
Identity = 180/232 (77.59%), Postives = 207/232 (89.22%), Query Frame = 1 
Query:   25 VVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
             VWQDRE+RFD+  A +Q RKGE +IDSINSVEDTKGNNGERGSLVVTNLR++WISHK SR NLSIGF+TV++I+IRKA+S+LRG TQAL I +K+  SRFEF+FTSLV++SPRLFTTVQAVLRAYET+ LYRDLKLRGSI++   LV LP E IYS+++GVWNLSS+QGNLG FF+TNVRLVWHANLAQNFNVSIPYMQM+ +RVR SKFGPALVVETS HSGGYILG RV
Sbjct:   23 AVWQDREIRFDTPTAHLQNRKGEAVIDSINSVEDTKGNNGERGSLVVTNLRIMWISHKNSRTNLSIGFNTVVSINIRKAKSKLRGATQALYIMTKFGGSRFEFIFTSLVQHSPRLFTTVQAVLRAYETTKLYRDLKLRGSIVRDGHLVLLPEESIYSQLKGVWNLSSEQGNLGTFFVTNVRLVWHANLAQNFNVSIPYMQMQDVRVRSSKFGPALVVETSQHSGGYILGFRV 254
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: A0A6H5JCP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP7_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 6.010e-121
Identity = 184/209 (88.04%), Postives = 187/209 (89.47%), Query Frame = 1 
Query:    1 MSSSKADEVVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQM 627
            MSSSKADEVVWQDREVRFDSTPAEMQCRKGEV+IDSINSVEDTKGNNGERG                      IGF+TVLN+SIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQM
Sbjct:    1 MSSSKADEVVWQDREVRFDSTPAEMQCRKGEVVIDSINSVEDTKGNNGERG----------------------IGFNTVLNMSIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQM 187
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: A0A835YZA3_9STRA (Bardet-Biedl syndrome 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA3_9STRA)

HSP 1 Score: 351 bits (901), Expect = 7.380e-119
Identity = 170/231 (73.59%), Postives = 202/231 (87.45%), Query Frame = 1 
Query:   28 VWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            VWQDRE+RFD+ P+ +  R+GE  IDSINSVEDTKGNNGERGSL+VTNLR+LW+SHK S+VNLSIG  TV  I+IRKARS+LRG TQALC  +K+  S+FEF+FTSLV+NSPR+FTTVQAVLRAYET+ LYRDLKLRGSI++  QL+ LP E I ++I+GVWNLSSDQGNLG F +TN+RLVW ANLAQNFNVSIPY+Q+KT+R RESKFGPALV+ET+A SGGYILG R+
Sbjct:    8 VWQDREIRFDAHPSLLAARRGEYHIDSINSVEDTKGNNGERGSLIVTNLRILWVSHKNSKVNLSIGLETVQTINIRKARSKLRGTTQALCALTKFQSSKFEFIFTSLVRNSPRMFTTVQAVLRAYETTKLYRDLKLRGSIVRDMQLMMLPQETICTQIQGVWNLSSDQGNLGTFIVTNIRLVWFANLAQNFNVSIPYLQIKTVRKRESKFGPALVIETTARSGGYILGFRL 238
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: A0A7S1XSS1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSS1_9STRA)

HSP 1 Score: 350 bits (898), Expect = 1.740e-117
Identity = 166/233 (71.24%), Postives = 206/233 (88.41%), Query Frame = 1 
Query:   22 EVVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            E +W+  E+RFDS+ A+++ R+GE +IDSINSVEDTKGNNG+RGSL+VTNLRV+W+SHK S+VNLS+GF  V NISIR+A+SRLRG TQAL + +KYN SRFEF+FTSLVKNSPRLFTTVQAVLRAYE++ LYR+LKLRGS+++  +L+ LP E++ SK++GVWNLS+DQGNLG FF+TNVRLVWHA+LAQNFNVSIPYMQMK++R+R SKFG A V+ETS  SGGYILG R+
Sbjct:   67 EDIWEHSEIRFDSSAAQLKPRRGEYLIDSINSVEDTKGNNGDRGSLMVTNLRVMWVSHKSSKVNLSVGFGAVQNISIRRAKSRLRGTTQALFVMTKYNNSRFEFIFTSLVKNSPRLFTTVQAVLRAYESTKLYRELKLRGSVVRDSKLLMLPREELVSKVDGVWNLSADQGNLGSFFVTNVRLVWHAHLAQNFNVSIPYMQMKSLRIRSSKFGQAFVIETSPKSGGYILGFRM 299
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: A0A067CLP2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CLP2_SAPPC)

HSP 1 Score: 344 bits (882), Expect = 6.930e-116
Identity = 168/235 (71.49%), Postives = 200/235 (85.11%), Query Frame = 1 
Query:   16 ADEVVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            AD V WQDRE+RFD + A M+ RKGEV IDSINSVEDTKGNNG+RGSL +TNLR+LW SH+ +R NLSIG+S + ++ IR A S+LRG TQAL I +KY  SRFEF+FTSLVK SPRLFTTVQAV R+YET+ LYRDLKLRG+II  K+L  LP EQ+Y+K+ GVWNLSSDQGNLG FF+TN+R+VWHANLA+NFNVS+PYMQ+K+ R+R SKFGPALV+ETSA SGGY+LG RV
Sbjct:   10 ADGVTWQDREIRFDISSAAMELRKGEVAIDSINSVEDTKGNNGDRGSLEITNLRLLWASHRSARTNLSIGYSCIQSVKIRTATSKLRGSTQALYIMTKYASSRFEFIFTSLVKASPRLFTTVQAVFRSYETTKLYRDLKLRGAIIADKELRLLPHEQVYTKVIGVWNLSSDQGNLGTFFVTNIRVVWHANLAENFNVSMPYMQIKSARIRNSKFGPALVIETSAGSGGYVLGFRV 244
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: H3GA39_PHYRM (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GA39_PHYRM)

HSP 1 Score: 341 bits (875), Expect = 7.740e-115
Identity = 166/232 (71.55%), Postives = 197/232 (84.91%), Query Frame = 1 
Query:   25 VVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            V WQDRE+RFD + A MQ RKGE +ID+INSVEDTKGNNG+RGSL +TNLR+LW SHK  R NLSIG+S + ++ IR A S+LRG TQAL + +KY  SRFEF+FTSLVK SPRLFTT+QAV R+YET+ LYR+LKLRG+IIK K+L  LP EQ+Y+++ GVWNLSSDQGNLG FF+TNVR+VWHANLA+NFNVSIPYMQ+ + R+R SKFGPALVVETSA SGGYILG RV
Sbjct:   12 VTWQDREIRFDISAAAMQLRKGETLIDAINSVEDTKGNNGDRGSLEITNLRLLWASHKSVRTNLSIGYSCIQSLKIRTATSKLRGSTQALYVMTKYANSRFEFIFTSLVKASPRLFTTIQAVFRSYETTKLYRELKLRGAIIKEKELTLLPHEQVYTRLNGVWNLSSDQGNLGTFFVTNVRIVWHANLAENFNVSIPYMQINSARIRGSKFGPALVVETSAASGGYILGFRV 243
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: A0A485LA64_9STRA (Aste57867_17753 protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485LA64_9STRA)

HSP 1 Score: 341 bits (875), Expect = 8.280e-115
Identity = 165/232 (71.12%), Postives = 198/232 (85.34%), Query Frame = 1 
Query:   25 VVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            + WQDRE+RFD   + M+ RKGEV IDSINSVEDTKGNNG+RGSL +TNLR+LW SH+ +R NLSIG++ V ++ IR A S+LRG TQAL I +KY+ SRFEF+FTSLVK SPRLFTTVQAV R+YET+ LYRDLKLRG+II+ K+L  LP EQ+Y+K+ GVWNLSSDQGNLG FF+TNVRLVWHANLA+NFNVS+PYMQ+K+ R+R SKFGPALV+ETS  SGGY+LG RV
Sbjct:   14 ITWQDREIRFDIATSAMELRKGEVAIDSINSVEDTKGNNGDRGSLEITNLRLLWASHRSARTNLSIGYNCVQSVKIRTATSKLRGSTQALYIMTKYSNSRFEFIFTSLVKASPRLFTTVQAVFRSYETTKLYRDLKLRGAIIQDKELRLLPHEQVYTKVIGVWNLSSDQGNLGTFFVTNVRLVWHANLAENFNVSMPYMQIKSARIRNSKFGPALVIETSVSSGGYVLGFRV 245
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: A0A7S4BJN3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJN3_CHRCT)

HSP 1 Score: 340 bits (873), Expect = 1.560e-114
Identity = 167/231 (72.29%), Postives = 198/231 (85.71%), Query Frame = 1 
Query:   28 VWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            VWQDRE+RFDS  A ++ R GEV IDS+ SVEDTKGNNGE+GSL +TNLR++WI  + ++VNLS+G+S V++I+IR A SRLRG TQAL + +KYN SRFEFVFT+LV++SPRLFTTVQAV RAY+TS LYRDLKLRG+IIK K LV LP EQ+ +K+ GVWNLSSDQGNLG FF+TNVRLVWHANLA+NFNVSIPYMQMK +RVR+SKFGPALVVE S   GGYILG R+
Sbjct:   12 VWQDREIRFDSPVASLELRPGEVAIDSMGSVEDTKGNNGEKGSLSITNLRLIWICTRSAKVNLSVGYSAVISINIRTANSRLRGNTQALYVMTKYNDSRFEFVFTNLVRSSPRLFTTVQAVYRAYDTSRLYRDLKLRGAIIKNKSLVMLPGEQMINKVVGVWNLSSDQGNLGTFFITNVRLVWHANLAENFNVSIPYMQMKVVRVRDSKFGPALVVEASQRCGGYILGFRM 242
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BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Match: K3X3B3_GLOUD (Uncharacterized protein n=3 Tax=Pythiaceae TaxID=4782 RepID=K3X3B3_GLOUD)

HSP 1 Score: 339 bits (869), Expect = 5.170e-114
Identity = 165/232 (71.12%), Postives = 195/232 (84.05%), Query Frame = 1 
Query:   25 VVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGERGSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSIIKGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNFNVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERV 720
            + WQDRE+RFD + A M+ RKGEV+IDSINSVEDTKGNNGERGSL +TNLR+LW SHK  R NLSIG+  +  I IR A S+LRG TQAL + +KY  SRFEF+FTSLVK SPRLFTT+QAV R+YET+ LYR+LKLRG+IIK K+L  LP EQ+Y+++ GVWNLSSDQGNLG FF+TNVR+VWHANLA+NFNVSIPYMQ+ + R+R SKFGPALV+ETS  SGGYILG RV
Sbjct:   10 LTWQDREIRFDVSAAAMELRKGEVLIDSINSVEDTKGNNGERGSLEITNLRLLWASHKSVRTNLSIGYICIQTIKIRTATSKLRGNTQALYVMTKYANSRFEFIFTSLVKASPRLFTTIQAVFRSYETTKLYRELKLRGAIIKEKELALLPHEQVYTRLNGVWNLSSDQGNLGTFFVTNVRIVWHANLAENFNVSIPYMQINSARIRSSKFGPALVIETSPASGGYILGFRV 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18951.6002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G173_ECTSI8.770e-16397.92Bardet-Biedl syndrome 5 n=1 Tax=Ectocarpus silicul... [more]
F0YFS0_AURAN1.060e-12377.59Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6H5JCP7_9PHAE6.010e-12188.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YZA3_9STRA7.380e-11973.59Bardet-Biedl syndrome 5 n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XSS1_9STRA1.740e-11771.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A067CLP2_SAPPC6.930e-11671.49Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
H3GA39_PHYRM7.740e-11571.55Uncharacterized protein n=21 Tax=Peronosporaceae T... [more]
A0A485LA64_9STRA8.280e-11571.12Aste57867_17753 protein n=9 Tax=Aphanomyces TaxID=... [more]
A0A7S4BJN3_CHRCT1.560e-11472.29Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
K3X3B3_GLOUD5.170e-11471.12Uncharacterized protein n=3 Tax=Pythiaceae TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18951contigEcto-sp13_S_contig18951:133..3326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score463.0
Seed ortholog evalue8.6e-128
Seed eggNOG ortholog2880.D7G173
Preferred nameBBS5
Model size726
KEGG koko:K16748
Hectar predicted targeting categoryother localisation
GOsGO:0001085,GO:0001103,GO:0001654,GO:0001655,GO:0001745,GO:0001751,GO:0001754,GO:0001822,GO:0001947,GO:0002009,GO:0003007,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006810,GO:0006996,GO:0007275,GO:0007368,GO:0007369,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0008134,GO:0008150,GO:0008289,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0015630,GO:0016043,GO:0022008,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0032266,GO:0032400,GO:0032401,GO:0032402,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0033059,GO:0034451,GO:0034464,GO:0035050,GO:0035091,GO:0035239,GO:0035295,GO:0036064,GO:0042051,GO:0042461,GO:0042462,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0046530,GO:0046907,GO:0048468,GO:0048513,GO:0048562,GO:0048568,GO:0048592,GO:0048598,GO:0048645,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048749,GO:0048793,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051875,GO:0051877,GO:0051904,GO:0051905,GO:0060271,GO:0060429,GO:0060562,GO:0060993,GO:0061371,GO:0070121,GO:0070491,GO:0070925,GO:0071840,GO:0072001,GO:0072003,GO:0072114,GO:0072116,GO:0072359,GO:0090596,GO:0097014,GO:0097546,GO:0097730,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901981
Exons6
EggNOG free text desc.phosphatidylinositol-3-phosphate binding
EggNOG OGs28IRP@1,2QR2Z@2759
Cds size726
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18951.6002.1prot_Ecto-sp13_S_contig18951.6002.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18951 133..3326 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462967.5303333-CDS-Ecto-sp13_S_contig18951:132..2311681462967.5303333-CDS-Ecto-sp13_S_contig18951:132..231Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18951 133..231 -
1681462967.540477-CDS-Ecto-sp13_S_contig18951:669..7981681462967.540477-CDS-Ecto-sp13_S_contig18951:669..798Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18951 670..798 -
1681462967.5486095-CDS-Ecto-sp13_S_contig18951:1661..17641681462967.5486095-CDS-Ecto-sp13_S_contig18951:1661..1764Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18951 1662..1764 -
1681462967.556073-CDS-Ecto-sp13_S_contig18951:2050..22281681462967.556073-CDS-Ecto-sp13_S_contig18951:2050..2228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18951 2051..2228 -
1681462967.5637374-CDS-Ecto-sp13_S_contig18951:2502..25681681462967.5637374-CDS-Ecto-sp13_S_contig18951:2502..2568Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18951 2503..2568 -
1681462967.571487-CDS-Ecto-sp13_S_contig18951:3175..33261681462967.571487-CDS-Ecto-sp13_S_contig18951:3175..3326Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18951 3176..3326 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18951.6002.1

>prot_Ecto-sp13_S_contig18951.6002.1 ID=prot_Ecto-sp13_S_contig18951.6002.1|Name=mRNA_Ecto-sp13_S_contig18951.6002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MSSSKADEVVWQDREVRFDSTPAEMQCRKGEVMIDSINSVEDTKGNNGER
GSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCI
TSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLRAYETSTLYRDLKLRGSII
KGKQLVTLPLEQIYSKIEGVWNLSSDQGNLGCFFLTNVRLVWHANLAQNF
NVSIPYMQMKTIRVRESKFGPALVVETSAHSGGYILGERVRQ
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mRNA from alignment at Ecto-sp13_S_contig18951:133..3326-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18951.6002.1 ID=mRNA_Ecto-sp13_S_contig18951.6002.1|Name=mRNA_Ecto-sp13_S_contig18951.6002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3194bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18951:133..3326- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCATCGTCGAAAGCGGATGAGGTCGTCTGGCAGGACAGGGAGGTAAG
GTTCGACTCCACGCCGGCCGAGATGCAGTGCCGGAAGGGAGAGGTAATGA
TCGACTCCATCAACTCCGTGGAGGACACCAAAGGCAACAACGGGGAAAGA
GGTGTGTGTATGTGTGTTGGGTGCAATCTGCTCGTGCATGTCATAATGCT
CGCGAACCACTGCGAAGGTCGGTGGGCGGGCATGGCCTGATCTGCGACAA
TGCGACACATTCCCGACAACAGCGTGGACTGGAGCACTCTTCCTTCTTGG
TTGATTGCTTAACTGTGTCATTTGGTTGTTGTTGTTTTTCTTCTTCGTCG
CATCTACTCTGCGCGCCACTCAGTACATCACCTCCATACATCTTTCGGTA
GCCATGTTGTACGCACCAGCCCGGGTCATACAGGAAAGGTCTGAAGATTT
TTCTCCGCCGTGCAGTGCGTACCTTCATCCGATAGTGCGCTAAGGATTCG
TCACCTGTTCCTCCCCTCTTCTTTTTTTACTCGTGCCTTAGCGCTTTTCA
CTTCAAGGTTGAAACGCTCACCGTGAACACGCACGCACGTAGTATTCAAA
ACCGCACGCAAGTACCCTAAACCAACCATCAAGGAGGGTGACTCGCCGTG
ATGTTCGGGGTATCTACGATGAAGGTGGGAGATGGAACAGCACATGCTAC
AGTACCTACCTGTACCTCTTCTCAACACGACGGTCCTTGTCCATCTCGTA
TCCGGCAGGTTCGCTCGTGGTGACGAACTTGCGAGTGCTGTGGATCTCGC
ACAAGATTTCCCGCGTAAACCTCAGTGAGTCCCCCGTCCCGCCAGGAATA
TGGTGGTGCTGCCGAAACCGTACCAGTATGAAAAAATCTACACCCGGAAC
GGCCACGCTGGACGAACGTACAAGACTTCTTGCTACAGATAGCTCTGTGT
AGCATCCGGAATGAAGCTGCGTGGAGTACGTCATAGAGTAGGTGTCGGGG
CGTCGTTGCACAACAATACCAAATGTTGGCATTCATGCGGTACGGAACGC
GTTCAATACTCTCGTTCAGTTGATGGATGTGATATTTCCGTTGAACAGGT
ATTGGGTTCAGCACCGTCTTGAATATCTCCATCCGAAAAGCAAGGTCTCG
CCTGAGGGGTATCACCCAGGCTCTCTGTATCACGTCCAAGTACAACCAAT
CCCGCTTCGAGTTCGTTTTCACCAGCCTGGTCAAGAACTCGCCCCGGCTC
TTCACCACGGTGCAAGCCGTACTCAGGTGCGGCCTTCACAAGTCGATCAA
TACACCGCTTTCTCATAAAAGAGCTAGCTGCAGAACACCTTATCGACGTG
GGAACCCCCCCCACACACACAGGGCGATTTTCAGCCGGACGTGCCTTTCA
CAGCGCCAAGAGCGCCGAAGGCAAGTATAGATAGATCTCTCGTGAGGAAT
TCGAAAACGCCAAGGCCGGCATGTTTACCCAAGTTTAATCATCGTGTCCC
TCCTTTATTTTGCTAGCTTTCGACCTATTGTTGATGCTGTTAATGTCCTG
GCTGTTTCACAGGGCGTACGAGACGTCGACACTTTACCGCGATTTGAAGC
TTCGAGGGTCGATCATAAAGGGCAAGCAGCTCGTCACGCTCCCGCTGGAG
CAGATATACAGCAAGGTATGCCGGCAAAGTTGAACAAGGAAGCTCAATAG
CTGGCACCAAGGATGTTTCAGGTTTAGAACTTCGTTTCGGGTTTAGAAGT
TCGACTCAAAATTTCGCACGCACGTTGCCATCAGCAACCGTTAGACCCGT
ACAGCTGAACTCTACTGCGAACGATGCTTGAGATCTTATAATTTGGCTTG
AATTGGTTTAACCATAGCCAAGTCACCTAATTCATGCGTTGGCTTCAGAC
AGGTACGATGATGTGAAAAATACCCCTATAAGACGAGGGGGGGGGACCGG
CAGAAGTAGTATTGGGCATGTCTTTGAGTTGTTACGTACATGCTCGCTTT
TTCCTGCAGCGGGCTTCCTTTCCCATTAGTTCTCTCCTTTGGCCGGATCA
GTCACACAGGATACAGAAGAGACGCAAGAGAGACTCCCCTTCCCCGATCG
ATCCCGAACGACCGCCCACTTTTTTCCTTGAGGCCTACCACGAGGACGAC
GACTGGAGTTAGGGATAGGGTCGTTAGCCAACCATTCTGTCCCTCCTTCG
CCTAAAACCAAGGACAGTAGCTGCTTCATACATCAATCTGCATGATAACT
GTGCTCGGAAACATGCATGACTTGCTCTTCCTTGACTCGCGTATCCTCCT
AGGTTTTTGGAGCGAACCCACAGTATCAATCATTTAAACTTGAACCACGT
GATGACTGGTCGGAGAAGTTTGAGGCGTTATCCCGGCATCAATGTCCGTG
CTGAAAGCGTGCAGGCGCGAAAGAAGCATGAATCAGGTACCGGGTAGGGC
ACGTGTGTTGTGTTTCTGGTGCTTCGATTCTTACCTGGCAAACGCCTCGG
CGTTGTGATCTTTGTGTCTTGACGGTAGATCGAGGGTGTGTGGAACCTCT
CCTCGGACCAGGGCAACCTAGGCTGCTTCTTCTTGACCAACGTTCGCCTC
GTGTGGCACGCCAATCTCGCCCAGAACTTCAACGTCTCCATTCCTTACAT
GCAGATGGTGAGAATAAGGAGGAGAGGGAATGTGTGTGTGTGTGTGTGTG
AGAGAGAGAGAGAGAGAGAGAGATAATCGAGGTGCGGCCGTCACCTTCGT
AAACAACGGTGTTTGTTCATTGAAAGCCACGACGAAGCACGACGGCTTGG
CGTGTGTGTTACTCTGTCCACTAGGAAAGCCCAGCCAGAAGAGGGCGCGG
AGCTCGCAGCCCAAGGAAAGCGAGCAAATAGCGTCGTCGGGTGGCTGTTA
AACTCTTGGGGCAAGTTGTTCCTTTTCACCTTCTTGTATTCACTTCTCCG
CGTGCTCGTGCATAGGAGACCACGATGTGACTAGCTGTGCGCCGAAGAGG
ACCGCACCGTGCACGGATGAGTGATACCGACCCCATAGCGCACCACTGCG
GCGTTCTTTGTTGCCTACGCGTTATCGAACAAAACCGATTCGCAGAAGAC
GATCCGGGTTCGAGAATCAAAGTTCGGCCCGGCTTTGGTGGTGGAGACTA
GCGCTCACTCGGGGGGCTATATTTTAGGTGAGCGGGTGAGACAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18951:133..3326-

>mRNA_Ecto-sp13_S_contig18951.6002.1 ID=mRNA_Ecto-sp13_S_contig18951.6002.1|Name=mRNA_Ecto-sp13_S_contig18951.6002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18951:133..3326- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCATCGTCGAAAGCGGATGAGGTCGTCTGGCAGGACAGGGAGGTAAG
GTTCGACTCCACGCCGGCCGAGATGCAGTGCCGGAAGGGAGAGGTAATGA
TCGACTCCATCAACTCCGTGGAGGACACCAAAGGCAACAACGGGGAAAGA
GGTTCGCTCGTGGTGACGAACTTGCGAGTGCTGTGGATCTCGCACAAGAT
TTCCCGCGTAAACCTCAGTATTGGGTTCAGCACCGTCTTGAATATCTCCA
TCCGAAAAGCAAGGTCTCGCCTGAGGGGTATCACCCAGGCTCTCTGTATC
ACGTCCAAGTACAACCAATCCCGCTTCGAGTTCGTTTTCACCAGCCTGGT
CAAGAACTCGCCCCGGCTCTTCACCACGGTGCAAGCCGTACTCAGGGCGT
ACGAGACGTCGACACTTTACCGCGATTTGAAGCTTCGAGGGTCGATCATA
AAGGGCAAGCAGCTCGTCACGCTCCCGCTGGAGCAGATATACAGCAAGAT
CGAGGGTGTGTGGAACCTCTCCTCGGACCAGGGCAACCTAGGCTGCTTCT
TCTTGACCAACGTTCGCCTCGTGTGGCACGCCAATCTCGCCCAGAACTTC
AACGTCTCCATTCCTTACATGCAGATGAAGACGATCCGGGTTCGAGAATC
AAAGTTCGGCCCGGCTTTGGTGGTGGAGACTAGCGCTCACTCGGGGGGCT
ATATTTTAGGTGAGCGGGTGAGACAG
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