prot_Ecto-sp13_S_contig18944.5998.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18944.5998.1
Unique Nameprot_Ecto-sp13_S_contig18944.5998.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length287
Homology
BLAST of mRNA_Ecto-sp13_S_contig18944.5998.1 vs. uniprot
Match: A0A6H5KYW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW8_9PHAE)

HSP 1 Score: 490 bits (1262), Expect = 1.040e-163
Identity = 258/287 (89.90%), Postives = 271/287 (94.43%), Query Frame = 0
Query:    1 KADAELGLRLLREIHVSTGYSPNAWHYGGVFLSFLKAGDETGALAIQSEWRDIQACNAREAMERMRPGAEKSGGADSDGSERRSRNGRTDPNSDKNGARTAQRDAAIQDPEGQRAVVELAAAAPGDRFQPLDLLCLAAFHADNGAWSDCLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVIGKVGAATGLAGAGLASWRKVAAENSEATERADEASKALRGCYESAVEALGRAGRHKQALQAKEGSSATVKHGLAMDPACFVSALRSCCRNDTNSEDSGSEAG 287
            + DAELGLRLLREIHVSTGYSPNAWHYGGVFLSFLKAGDETGALAIQSEWRDIQACNAREA ERMRPGA++S  A+ D SERRSR+GRTDPNSDKNGAR+A+R AAIQDPEGQRAVVELAA APGD FQPLDLLCLAAFHADNGAWS+CLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVIG VGA TG AGAGLASWR+VAA+NSEATER DEASKALRGCYESAVEALGRAGRHKQALQAKEG+S TVKHGL+MDPACFV ALRSCC NDT+SEDSGSEAG
Sbjct:  547 QGDAELGLRLLREIHVSTGYSPNAWHYGGVFLSFLKAGDETGALAIQSEWRDIQACNAREATERMRPGADRSFSANGDSSERRSRSGRTDPNSDKNGARSAKRGAAIQDPEGQRAVVELAAVAPGDHFQPLDLLCLAAFHADNGAWSECLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVIGNVGATTGFAGAGLASWRQVAAKNSEATERVDEASKALRGCYESAVEALGRAGRHKQALQAKEGASVTVKHGLSMDPACFVPALRSCCCNDTDSEDSGSEAG 833          
BLAST of mRNA_Ecto-sp13_S_contig18944.5998.1 vs. uniprot
Match: D7G394_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G394_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 2.500e-119
Identity = 198/224 (88.39%), Postives = 207/224 (92.41%), Query Frame = 0
Query:   65 MRPGAEKSGGADSDGSERRSRNGRTDPNSDKNGARTAQRDAAIQDPEGQRAVVELAAAAPGDRFQPLDLLCLAAFHADNGAWSDCLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVIGKVGAATGLAGAGLASWRKVAAENSEATERADEASKALRGCYESAVEALGRAGRHKQALQA-KEGSSATVKHGLAMDPACFVSALRSCCRNDTNSEDSGSEAG 287
            MR GA+ SGG D D SE RSRNGR DPNSDKNGARTA R  A QDPEGQRAVVELAAAAPGDRFQPLDLLCLAAFHADNGAWSDCLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEV+G VGA TG+AGAGLASWR+VAAENSEATERADEASKALRGCYESAVEALGRAGRHK+ALQ  +EG+S TVKHGL+MDPACFVSALRSCC NDT+SEDSGSEAG
Sbjct:    1 MRRGADGSGG-DGDCSEHRSRNGRIDPNSDKNGARTAHRGVAKQDPEGQRAVVELAAAAPGDRFQPLDLLCLAAFHADNGAWSDCLDVLGTAQEVSRTARAAVRAKANELLLGRTERGEVVGNVGATTGVAGAGLASWRQVAAENSEATERADEASKALRGCYESAVEALGRAGRHKEALQVLEEGASVTVKHGLSMDPACFVSALRSCCCNDTDSEDSGSEAG 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18944.5998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYW8_9PHAE1.040e-16389.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G394_ECTSI2.500e-11988.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18944contigEcto-sp13_S_contig18944:2..2886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18944.5998.1mRNA_Ecto-sp13_S_contig18944.5998.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18944 2..2886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18944.5998.1 ID=prot_Ecto-sp13_S_contig18944.5998.1|Name=mRNA_Ecto-sp13_S_contig18944.5998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
KADAELGLRLLREIHVSTGYSPNAWHYGGVFLSFLKAGDETGALAIQSEW
RDIQACNAREAMERMRPGAEKSGGADSDGSERRSRNGRTDPNSDKNGART
AQRDAAIQDPEGQRAVVELAAAAPGDRFQPLDLLCLAAFHADNGAWSDCL
DVLGTAQEVSRTARAAVRAKANELLLGRTERGEVIGKVGAATGLAGAGLA
SWRKVAAENSEATERADEASKALRGCYESAVEALGRAGRHKQALQAKEGS
SATVKHGLAMDPACFVSALRSCCRNDTNSEDSGSEAG
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