mRNA_Ecto-sp13_S_contig1894.5996.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: A0A6H5JSS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS5_9PHAE) HSP 1 Score: 1333 bits (3451), Expect = 0.000e+0 Identity = 674/711 (94.80%), Postives = 688/711 (96.77%), Query Frame = 2
Query: 188 MGNYVCRPIHPTEQERGPSERETAPMSAATWRVLARVAAGFALQLLSVYTSISIFVKDTSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSCKQPIQPAMVLGLAGVVLMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYMGQGQCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGDNTLFMWKPFSETDVSHALQ 2320
M +CR +HPT+QE G S RETAPMSAA WRVLARVAAGFALQLLSVYTSIS+FVKDTSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVV+VALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWS KQPIQ AMVLGLAGVVLMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKV HDMLNN+TFIWGVTESLADTLP TGQS SQLK IQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEV+VQEMAELHVNFAKALVRMAGRSIETTLD GT +GEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPK+FGTLFRCARGAQLAPGSGLGLSSVLD+CKLL AKVDL+SPGVDKGTT TLELPIGTDPTKTN VDAGVEWTPPATGFR LV+DDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEH AKG AIDVVITDHYMGQG+CTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGDNTLFMWKPFS+TDVSHALQ
Sbjct: 1 MRKCLCRAVHPTDQEPGLSGRETAPMSAAPWRVLARVAAGFALQLLSVYTSISVFVKDTSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVAVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQPIQAAMVLGLAGVVLMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVAHDMLNNTTFIWGVTESLADTLPPTGQSASQLKMIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVDVQEMAELHVNFAKALVRMAGRSIETTLDLGTAEGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKIFGTLFRCARGAQLAPGSGLGLSSVLDMCKLLEAKVDLQSPGVDKGTTVTLELPIGTDPTKTNAVDAGVEWTPPATGFRVLVIDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHLMAKGAAIDVVITDHYMGQGRCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGDNTLFMWKPFSKTDVSHALQ 711
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: D7G737_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G737_ECTSI) HSP 1 Score: 1331 bits (3444), Expect = 0.000e+0 Identity = 668/717 (93.17%), Postives = 691/717 (96.37%), Query Frame = 2
Query: 188 MGNYVCRPIHPTEQERGPSERETAPMSAATWRVLARVAAGFALQLLSVYTSISIFVKDTSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSCKQPIQPAMVLGLAGVVLMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYMGQGQCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGDNTLFMWKPFSETDVSHALQVITQRT 2338
MGNYV RP+HPT+QE GPSER+ APMSAA WRVL RVA GFALQLLSVYTSISIFVKDTSYLWTGMAITAGLLF+TPAECRLERFAHVFSGALAYYLLDFHY+RFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPM PRDIEQLKFLGALMLFPVF GSLAASVPGSVAFRLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWS KQPIQPAMVLGLAGVVLMFAFT YGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLT+GGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQ REKASLERAEK+IE QTVQLCKVGHDMLNNSTFIWGVTESLADTLP TGQS SQLK+IQAAITM+GTLVKDM DSFKPEGHGRP+RRTEV+VQEMA+LHVNFAKALVRMAG+SIETTLDKGTT+GEF VFTDRDRLHQIL NLVGNAVKYTKSGTIVLRVSRQDD+G TGSVILQV+DTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVD+KSPG+DKGTT TLELPIGTDPTKTN +DAG+EWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHF AKGGAIDVVITD YMGQGQCTGADLIS IRQGRLRGVSK+VPCILCSGREVKMEEFGDNTLFMWKPFSETDVSHALQ +R+
Sbjct: 1 MGNYVYRPVHPTDQEPGPSERKPAPMSAAPWRVLGRVAGGFALQLLSVYTSISIFVKDTSYLWTGMAITAGLLFSTPAECRLERFAHVFSGALAYYLLDFHYDRFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMTPRDIEQLKFLGALMLFPVFVGSLAASVPGSVAFRLYFGANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSSKQPIQPAMVLGLAGVVLMFAFTGYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTVGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQTREKASLERAEKVIEAQTVQLCKVGHDMLNNSTFIWGVTESLADTLPPTGQSASQLKSIQAAITMSGTLVKDMIDSFKPEGHGRPVRRTEVDVQEMADLHVNFAKALVRMAGKSIETTLDKGTTEGEFNVFTDRDRLHQILGNLVGNAVKYTKSGTIVLRVSRQDDSGKTGSVILQVVDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDVKSPGIDKGTTVTLELPIGTDPTKTNTMDAGLEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFLAKGGAIDVVITDMYMGQGQCTGADLISGIRQGRLRGVSKDVPCILCSGREVKMEEFGDNTLFMWKPFSETDVSHALQSAVRRS 717
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: D8LPK5_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPK5_ECTSI) HSP 1 Score: 386 bits (991), Expect = 4.000e-120 Identity = 240/691 (34.73%), Postives = 379/691 (54.85%), Query Frame = 2
Query: 287 LARVAAGFALQLLSVYTSISIFVKD--TSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYF---GANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSCKQPIQPAMVLGLA---GVVLMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGE-FKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGA-IDVVITDHYMGQGQCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGD-NTLFMWKPFSETDVSHALQVI 2326
L R+ GF Q + V SI +F T + WT AI + +TP ER H+ S L Y + F + +FP L+ ++ N++G G + FP + +++ LKFL + FPV S+ AS+PGS+AF YF +L+ V VNYT+GH+SGT +LYP +++PALW + +V G + G+ M AF++Y + F +I+ YG +V VS +DQ++A L+ +LGLT GRGPF E V++ TQ+ + +AFV I ++LR LQ EK S +AE++ E QT+ L ++GHDM NN+T I + E + T S L+T+++ + LV DM D R + + +V+++E+ ++ ++ + G+ + T+ DGE +V+ +++RLHQI+ N++ N+VKYT+SGTIVL ++ +V ++V D+GIG+ D+ KVF FR +Q+ G+GLGLS+V +C +GAK+D+ SPG +G+T TL P ++ +++ F L +DDS++IR +M + L GCDV S E+++ D+VITD +MG TG D I+ +R+G +RG+S ++PCILCSG + EF D T+ + KPFS D++ AL +
Sbjct: 5 LGRILGGFIAQYIGVLVSIKVFASPGGTIFWWTQTAIAIAAMLHTPDPHWPERVGHIASSTLTY--IPFRFRKFPVPLLFAICASNSMGQFFGYVSMKHFFP--VLSQKEVGTLKFLAIFVAFPVVIASIVASIPGSLAF--YFLGTDVDLFSVAVNYTLGHMSGTIALLYPLLIVPALWKTRSRSPNTLVCGTSAFFGITSMCAFSNYHLLGFASIVVMYGLLVGVSACIDQFHASLVQLACMGSILGLTAAGRGPFVHAVKDRE-TDEVLIGTQMGIAALSALNAFVVILVSQLRDLQTFEKISRCQAEELAERQTLDLYRIGHDMKNNATLIQALCE-----VGETDGDNSILETVKSVNILGNVLVSDMVDMVNGSKAHRVVPKEDVDIKELLNVYSMVGTGMLLLEGKDKDITMGVRIADGEKLEVYINKERLHQIMCNILSNSVKYTQSGTIVLEAGCCSES----TVEIRVTDSGIGMSEADVCKVFDLFFRSGPASQINSGTGLGLSNVRKICNSIGAKIDVSSPGEGQGSTFTLVFPRTRRSIVSSPRQISTQFS-----FHILAMDDSVLIRGLMSKYLTSFGCDVVSACSAEESRALLGQPNQEKFDIVITDSFMGDE--TGIDFINSLRRGAVRGLSSDLPCILCSG---DIHEFDDPRTISITKPFSSADIADALNIF 669
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: Q8QNA2_ESV1K (EsV-1-186 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNA2_ESV1K) HSP 1 Score: 376 bits (965), Expect = 2.820e-116 Identity = 239/687 (34.79%), Postives = 370/687 (53.86%), Query Frame = 2
Query: 293 RVAAGFALQLLSVYTSISIFVKD--TSYLWTGMAITAGLLFNTPAECRLERFAHVFSGALAYYLLDFHYERFPTGLVVSVALCNALGCVVGEHCFRRVFPRTPMIPRDIEQLKFLGALMLFPVFAGSLAASVPGSVAFRLYF---GANLWKVFVNYTVGHISGTTVVLYPTMVLPALWSCKQPIQPAMVLGLA---GVVLMFAFTDYGVFAFGAILGAYGSIVTVSTQLDQWNACLMGAVAAALMLGLTMGGRGPFNSVCYFEEGARNVILSTQLATTVATGCSAFVSISSTRLRKLQAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGE--FKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGA-IDVVITDHYMGQGQCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGD-NTLFMWKPFSETDVSHAL 2317
R+ GF Q + V S+ +FV T + WT AI + +T ER H+ S L Y + F + +FP L++++ NALG G + +P + P+++ L+FL + FPV S+ AS+PGS+AF YF L V VNYT+GHISGT +LYP +++P LW + +V G++ G+ M F+DY +F F +I+G Y +V VS +DQ+ A L+ +LG T GRGPF V E A V++ TQ+ + +AFV I ++LR LQ E+ S +A ++ E QT+ L ++GHDM NN+T I + E + T L+T+++ + LV DM D + R + + +V++ E+ ++ L+ + + + T+ D F +T+R+RLHQI+ NLV NAVKYT+ G IVL ++ +V ++V D+G+G+ D+ KVF FR R +Q+ G+GLGLS+V +C + AK+++ SPG KG+T TL LP T ++ +++ FR L +DDS++I ++ + L GC+V S E+++ D+VITD MG TG D I+ +R+G +RG+ ++PCILCSG EFGD TL + KPFS D++ AL
Sbjct: 7 RILGGFIAQYIGVLVSMEVFVSPGGTIFWWTQTAIAIAAMLHTSDTHWPERVGHIASSMLTY--IPFRFRKFPVPLLLAICASNALGQFFGYVSMKHFYP--VLSPKEVGTLRFLAIFVAFPVIIASIVASIPGSLAF--YFLGTDVELSSVVVNYTLGHISGTITLLYPLLIVPTLWKNRPRSPNTLVCGISVFLGITSMCPFSDYHLFGFASIVGMYALLVGVSAYIDQFQASLVQLACTGSILGFTAAGRGPFVHVMKDGE-AEEVLIGTQMGIAALSALNAFVVILVSQLRDLQKSERISRCQAAELAERQTLDLYRIGHDMKNNATLIQAICE-----VGETDGDNRILETVKSVNILGNVLVSDMVDMVNGKQVHRAVPKEDVDITELLNVYSMVGTGLLLLEEKDKDITVGVRIDDESENFGAYTNRERLHQIMCNLVSNAVKYTQCGKIVLSAGCSSES----TVEIRVTDSGVGLSEADVCKVFDLFFRSERASQINSGTGLGLSNVRKICDAIDAKIEVSSPGEGKGSTFTLVLPRRRRSTVSSPRQISTQFS-----FRILAMDDSILILRLLSKYLTSFGCEVVNACSAEESRALLGQPNQEKFDMVITDSSMGDE--TGIDFINSLRKGAVRGLPSDLPCILCSGEG---HEFGDPRTLSIIKPFSAADIAEAL 667
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: A0A0Q8T2Z0_9BURK (Histidine kinase n=2 Tax=unclassified Acidovorax TaxID=2684926 RepID=A0A0Q8T2Z0_9BURK) HSP 1 Score: 125 bits (314), Expect = 1.050e-25 Identity = 100/331 (30.21%), Postives = 163/331 (49.24%), Query Frame = 2
Query: 1151 RKLQAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLD-KGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRC-ARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWT-PPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYM 2134
R+++ +A+ E+AE ++ L + H++ I G TE+L DT PL L T+ A L+ D+ D+ K E + + +++E+ E + A + A + +E LD G ++ D R+ Q+L NL+GNA+K+T +G + LRVS G ++L+V DTGIGIDA + ++F + A + G+GLG + L +L+G + + S V G+T T+ LP+ T + + +W P R L VDD E+++ L R G +T GSG +A E FAA+ DV++ D M
Sbjct: 636 RRMETDLRAAKEQAEHAAAARSTFLANMSHEIRTPMNAIIGFTEALLDT-PLESTQRRHLGTVHHAARSMLRLLNDILDTAKLEKGAVELEVADFSLRELCEQIL--ASLRITAAKKGLELVLDYPGAVPTHWQ--GDAFRIQQVLLNLLGNAIKFTHAGRVTLRVS-----GVNAQLVLEVTDTGIGIDAAGVERIFDPFAQADASTTRRYGGTGLGTTIARQLAELMGGAIAVASR-VGHGSTFTVRLPLRTGEAPVDGSVSARDWLRAPLPSLRVLAVDDVPANLELLQITLQRGGHKITTAGSGTQALEAFAAE--RFDVILMDLQM 953
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: A0A2V4HR64_9PSED (Histidine kinase n=1 Tax=Pseudomonas soli TaxID=1306993 RepID=A0A2V4HR64_9PSED) HSP 1 Score: 120 bits (302), Expect = 2.330e-24 Identity = 113/357 (31.65%), Postives = 177/357 (49.58%), Query Frame = 2
Query: 1205 ETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQ---LKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQ--VIDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKS-PGVDKGTTATLELPI-GTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYMGQGQCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEE 2254
E +TV L + H++ T ++G+ +L + L LT S Q L+ IQ++ + L+ ++ D K E P+ ++ ++ V A R G IE +D ++ D RL QIL NL+GNA+K+T+SG I LR++ QD + TGSV+LQ V DTGIGI + K+F ++ A G G+GLGLS L L+G + + S PG+ + + L + T P A + P R LV +D+LV + +++ L LG T + G++A + + + DVVITD M + G +L +R+ RGV NVP I + ++ EE
Sbjct: 481 EAKTVFLATMSHEI---RTPLYGLVGNL-ELLSLTNMSERQRQYLEIIQSSSNVLFQLISNVLDVSKIESGQMPLEEAPLDPAQLVHDAVIGFSATARKKGLGIEAEIDPRVPR---QILGDAVRLRQILHNLLGNAIKFTESGLIRLRLTVQDRS--TGSVLLQWQVTDTGIGIPESAMDKLFNPFYQVA-GVPSGSGAGLGLSICKRLSDLMGGNIRVVSEPGLGSSFSLFITLAVVDTAPPPPLMTLAAADADAPCLNMRVLVAEDNLVSQAVLREQLEALGAQPTVVPDGKRALDIWHTQ--TFDVVITDINMPR--LNGYELAKALRE---RGV--NVPIIGITANAMREEE 818
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: G0GC52_SPITZ (Integral membrane sensor hybrid histidine kinase n=3 Tax=Spirochaeta thermophila TaxID=154 RepID=G0GC52_SPITZ) HSP 1 Score: 119 bits (298), Expect = 5.010e-24 Identity = 98/343 (28.57%), Postives = 168/343 (48.98%), Query Frame = 2
Query: 1160 QAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGA-QLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTD-------PTKTNDVDAGVEWT----------PPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYM 2134
Q R K + E AE+ ++ L + H++ I G++E L + L+G+ +TIQ A L+ D+ D + E + R +++ + LHV + + +S+ L+ + + V +D RL Q+L NLVGNA+K+T G +VLRV ++ ++ QV DTGIGI E++P+VF + +G + GSGLGLS DL +L+G +++++S KG+ T+ +P P + ++ VEW GF LV DD+ R ++ R R+G V + +G++A E + + D+V+ D++M
Sbjct: 347 QERLKEAKEEAERADRAKSAFLATMSHELRTPLNGIIGMSELLMSS-GLSGELVEYARTIQTAGENLLALINDILDVSQLESGKLKVERRPCDLKAVL-LHV-YKTLYPQTIHKSLRFVLEVAS-EVPAVVVSDEARLSQVLFNLVGNAIKFTSRGEVVLRVWMEEAEEGRAKIVFQVRDTGIGIPREELPRVFERFHQVDQGVTRRFQGSGLGLSIARDLVELMGGRIEVESEE-GKGSCFTVRIPFQVPVSSARVLPFVRDGLEEKVEWRGSLGEEVVEDEEPGGFWVLVADDNEANRVLLHRMFSRMGGRVVTVENGKEAVERVRER--SFDLVVLDYHM 682
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: A0A0T6UK98_9PSED (Histidine kinase n=1 Tax=Pseudomonas sp. TTU2014-080ASC TaxID=1729724 RepID=A0A0T6UK98_9PSED) HSP 1 Score: 119 bits (299), Expect = 6.540e-24 Identity = 94/332 (28.31%), Postives = 152/332 (45.78%), Query Frame = 2
Query: 1190 AEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKS-PGVDKGTTATLELPIGTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYMGQGQCTGADLISDIRQ 2182
A++ +T L + H++ + G+ E + LT + ++ + L+ D+ D + E + N++E+ E + L R ++ +D T V D R QILSNL NA+K+T+SG++ +R+S T + L V DTGIGI +ED+ +F + + G+GLGL LCK++G +D+ S PG +GT + L + T D + A + LVVDD V RE++ + L+ LG +V +G +A + + A+ DVVITD M G DL IR+
Sbjct: 703 ADEASRAKTTFLATMSHEIRTPMNAVIGILELVLKRTELTSSDRTSIEIAHTSAKSLLDLIGDILDIARIESGRLSLSLKRANLRELVESVARIFEGLARQKHLTLNVDID---TSVNCDVLIDAMRFKQILSNLTSNAIKFTESGSVCIRISGDKIDATCMQIALSVTDTGIGISSEDLEHLFHPFSQVKHSTNVREGAGLGLVICRSLCKMMGGAMDMTSEPG--RGTRVDVRLCLQTLTPVEVDEPQPLTRNHSARCLQVLVVDDHAVNREILHQQLLYLGHEVVQAENGIEALKEWRAQ--PFDVVITDCRMPG--MDGHDLTQAIRE 1025
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: J0KK64_9BURK (Histidine kinase n=1 Tax=Acidovorax sp. CF316 TaxID=1144317 RepID=J0KK64_9BURK) HSP 1 Score: 117 bits (293), Expect = 3.520e-23 Identity = 104/340 (30.59%), Postives = 163/340 (47.94%), Query Frame = 2
Query: 1151 RKLQAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEM-----AELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFT-DRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRC-ARGAQLAPGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWT-----PPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYM 2134
R+++ + + E+AE ++ L + H++ I G TE+L DT PL L T+ A L+ D+ D+ K E + + +++E+ A L +N AK + +E LD +G + D R+ Q+L NL+GNA+K+T G + LRV AG ++LQV+DTGIGIDA + ++F + A + G+GLG + L +L+G + + S + +G+T T+ LP+ T DAG T P R L VDD E+++ L R G +T +GSG A E FA + DVV+ D M
Sbjct: 636 RRMETDLRTAKEQAEHAAAARSTFLANMSHEIRTPMNAIIGFTEALLDT-PLESTQRRHLGTVHHAARSMLRLLNDILDTAKLEKGAVELEVADFSLRELCDQILASLRINAAK-------KGLEVVLDY--PEGVPVHWQGDAFRIQQVLLNLMGNAIKFTHEGRVTLRV-----AGANAQLVLQVVDTGIGIDAAGVERIFDPFAQADASTTRRYGGTGLGTTIARQLAELMGGSIAVVSQ-MGQGSTFTVRLPLRTGQPP---ADAGPSTTRDWLRAPLPTLRVLAVDDVPANLELLQITLQRGGHKLTAVGSGALALEAFAQQ--RFDVVLMDLQM 954
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Match: A0A3S3LDI6_9RHOB (Histidine kinase n=3 Tax=root TaxID=1 RepID=A0A3S3LDI6_9RHOB) HSP 1 Score: 115 bits (288), Expect = 8.020e-23 Identity = 110/402 (27.36%), Postives = 185/402 (46.02%), Query Frame = 2
Query: 1160 QAREKASLERAEKMIETQTVQLCKVGHDMLNNSTFIWGVTESLADTLPLTGQSTSQLKTIQAAITMNGTLVKDMTDSFKPEGHGRPIRRTEVNVQEMAELHVNFAKALVRMAGRSIETTLDKGTTDGEFKVFTDRDRLHQILSNLVGNAVKYTKSGTIVLRVSRQDDAGTTGSVILQVIDTGIGIDAEDIPKVFGTLFRCARGAQLA-PGSGLGLSSVLDLCKLLGAKVDLKSPGVDKGTTATLELPIGTDPTKTNDVDAGVEWTPPATGFRALVVDDSLVIREMMKRCLIRLGCDVTPLGSGEKAKEHFAAKGGAIDVVITDHYMGQGQCTGADLISDIRQGRLRGVSKNVPCILCSGREVKMEEFGDNTLFMW--KPFSETDVSHALQVITQRTPSDEKA 2356
+A + + +RAE ++ L +GH++ + G+ E L D+ L+ + +TI+++ T++ D+ D K E + +++ + + + G + D + D R+ QIL+NL+GNAVK+T +G +++RV + A + L V DTGIGI E+I +FG + G+GLGL+ +L +L+G V ++S + G + + + D G T P T ALV+DDSLV R +++R L G +VT +G +A F +G A D+V+TDH M G +LI +R+ RG+ + +L S E D W KP ++ H LQ ++ R P + A
Sbjct: 208 EAELETARQRAETASRAKSAFLANMGHELRTPMNGVVGMAELLVDS-DLSDEQRLYAETIRSSGEALLTIINDVLDFSKIEAERLKLFPEVFDLERCIHEIMMLLQPSAKEKGIGLLVDYDLFLPT---RFRADPGRVRQILTNLIGNAVKFTATGHVLIRVVGLERADGEYDLHLTVEDTGIGIAPENIEHIFGEFNQVDTATNRRFEGTGLGLAITRELVRLMGGTVWVES---ELGRGSCFGVRFTVPRAEPGDPVEGAGPTQPITLRAALVIDDSLVNRMILERQLQTYGLEVTLCRTGAEALRAFD-EGIAFDIVLTDHRMPD--IDGVELIRRLRE---RGIDTPI-LLLTSDAEAFRAAQADCRGIDWLEKPVLRAELFHMLQKLSGRAPPEPAA 595 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1894.5996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1894.5996.1 >prot_Ecto-sp13_S_contig1894.5996.1 ID=prot_Ecto-sp13_S_contig1894.5996.1|Name=mRNA_Ecto-sp13_S_contig1894.5996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=724bp MGNYVCRPIHPTEQERGPSERETAPMSAATWRVLARVAAGFALQLLSVYTback to top mRNA from alignment at Ecto-sp13_S_contig1894:4648..7051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1894.5996.1 ID=mRNA_Ecto-sp13_S_contig1894.5996.1|Name=mRNA_Ecto-sp13_S_contig1894.5996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2404bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1894:4648..7051+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1894:4648..7051+ >mRNA_Ecto-sp13_S_contig1894.5996.1 ID=mRNA_Ecto-sp13_S_contig1894.5996.1|Name=mRNA_Ecto-sp13_S_contig1894.5996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2172bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1894:4648..7051+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |