mRNA_Ecto-sp13_S_contig18935.5994.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18935.5994.1
Unique NamemRNA_Ecto-sp13_S_contig18935.5994.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A6H5KE11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE11_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 1.010e-142
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQ+LRR+FVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP
Sbjct:  514 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQALRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 733
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: D7FIK0_ECTSI (WD repeat membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK0_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 2.290e-138
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRR+FVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP
Sbjct: 1135 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 1354
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A7S2AWF5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWF5_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.280e-103
Identity = 158/220 (71.82%), Postives = 186/220 (84.55%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            +LCGQH +ALKLFLQCG +EVE AI VVGKARNDMLTHTLIDFLMGETDGVPK+P ++YRLY+ALG+Y+QAAKTA+IIA+QEQD GNY  AH IL ETIRQL +Q   VP SLRR F LLHSY+LVKK + R DH GAAR+LLRVA+SIS+FP H+V +LTSTVIE  R+GL+ SA EYA+ LMRQEYR Q+D K++R IE +VRRPNR+E PEP S+CP
Sbjct:  158 ALCGQHAKALKLFLQCGDKEVERAIEVVGKARNDMLTHTLIDFLMGETDGVPKEPFHVYRLYLALGNYAQAAKTALIIARQEQDGGNYFQAHNILHETIRQLGEQRTRVPLSLRRPFTLLHSYLLVKKRIARDDHAGAARLLLRVAKSISKFPAHMVIILTSTVIESARAGLKKSALEYATVLMRQEYRAQVDSKFKRKIEGLVRRPNREELPEPVSECP 377
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A835ZAW6_9STRA (WD repeat membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW6_9STRA)

HSP 1 Score: 331 bits (849), Expect = 1.770e-101
Identity = 168/219 (76.71%), Postives = 190/219 (86.76%), Query Frame = 2 
Query:   26 CGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEE-PEPTSKCP 679
            CGQHHRALKL LQ G+ EV AAI VVG+ARNDMLTHTLID+LMGETDGVPKDPN+IYRLY+ALG+Y QAAKTAIIIA+QEQDLGNY+ AH +L+E IR+LEDQ   VPQ+LRR F+LLHSY L K++ RRG+HEGAARMLLRVARS SRFP H V VLTS VIECQR+GLR SAFEYAS LMR E+RGQIDKKYRR+IEAIVRRP+R+ E PE  + CP
Sbjct: 1188 CGQHHRALKLLLQRGEAEVAAAIDVVGRARNDMLTHTLIDYLMGETDGVPKDPNHIYRLYLALGNYQQAAKTAIIIARQEQDLGNYREAHAVLYEAIRRLEDQRARVPQALRRPFLLLHSYTLAKRLARRGEHEGAARMLLRVARSASRFPAHTVAVLTSCVIECQRAGLRESAFEYASVLMRPEHRGQIDKKYRRSIEAIVRRPSREPEAPEVCTPCP 1406
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A2D4CLP2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CLP2_PYTIN)

HSP 1 Score: 309 bits (792), Expect = 2.040e-100
Identity = 147/219 (67.12%), Postives = 186/219 (84.93%), Query Frame = 2 
Query:   23 LCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            +CG +H+AL+LFLQCG  E+  AI VVGKARNDMLTHTLID LMGETDG+PKDPN+I+RLYMALG+Y QAAKTA+II++QEQ+LGNYK+AH +L ET RQLE   IHV Q LR++ +LLHSYILVKK+V+RG+H  AARML+RVA+ IS+FPTH+  +L S VIECQR+GLR  +++YA+TLM+ EYR  IDK+ +RNIEAIVRRPN+++ P+P + CP
Sbjct:  196 ICGNYHKALRLFLQCGDSELSRAIDVVGKARNDMLTHTLIDHLMGETDGIPKDPNHIFRLYMALGNYPQAAKTALIISRQEQELGNYKMAHDVLVETHRQLESHKIHVSQELRQSLMLLHSYILVKKLVKRGEHTAAARMLVRVAKHISKFPTHVSNILISAVIECQRAGLRAYSYDYATTLMKPEYRNNIDKEIKRNIEAIVRRPNKEQAPDPVTPCP 414
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: F0YFC0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFC0_AURAN)

HSP 1 Score: 319 bits (817), Expect = 2.320e-97
Identity = 154/220 (70.00%), Postives = 190/220 (86.36%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            +LCGQ+ RALKLF+QCG++EV  AI +VGKAR+D LTHTLIDFLMGE DGVPKDPNYIYRLY+ALG++ QAAKTA+IIA+QEQDLG+YK AH IL+ET  QLE Q +HVPQ+LR+ F+LLHSY+LVKK+++ GDH+ AARMLLRVA+SIS+FP+H  P+LTSTVIECQR+GL+ SA EYA+ LMR E RG+ID K++R IE ++RRPN +EEPE  S CP
Sbjct: 1081 ALCGQYPRALKLFIQCGEKEVHRAIEIVGKARSDSLTHTLIDFLMGEPDGVPKDPNYIYRLYLALGNFPQAAKTAVIIARQEQDLGSYKAAHAILYETTIQLEAQEVHVPQNLRKPFILLHSYLLVKKLIKAGDHDAAARMLLRVAKSISKFPSHGAPILTSTVIECQRAGLKASAHEYATQLMRPELRGKIDPKFKRKIEQMIRRPNLEEEPELLSPCP 1300
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A7S1CDP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDP1_9STRA)

HSP 1 Score: 318 bits (816), Expect = 2.810e-97
Identity = 157/220 (71.36%), Postives = 188/220 (85.45%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            ++CGQ+H+ALKLFLQCG+ E++ AI VVGKAR+DMLTHTLIDFLMGETDGVPKDPNYI+RLYMALG+Y QA KTAIII++QEQ+LGNYKVAH ILFET + LE Q I VPQ+L R+  LLHSYILVKK+V++ +HE AARML+RVA+ IS+FP+HIVP+LTSTVIECQR+GL+ SAFEYAS LMR EYR QI+ K +R IE +VRRPN +E  E    CP
Sbjct: 1076 AICGQYHKALKLFLQCGEAEMDRAIEVVGKARSDMLTHTLIDFLMGETDGVPKDPNYIFRLYMALGNYPQAGKTAIIISRQEQELGNYKVAHSILFETHKDLEAQNIRVPQALARSLRLLHSYILVKKLVKQNNHEAAARMLIRVAKHISKFPSHIVPILTSTVIECQRAGLKRSAFEYASMLMRPEYRTQIEPKLKRKIEQLVRRPNTEEAEEEQRPCP 1295
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A7S2CHE3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHE3_9STRA)

HSP 1 Score: 300 bits (769), Expect = 5.190e-96
Identity = 154/223 (69.06%), Postives = 186/223 (83.41%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDK-KYRRNIEAIVRRPNR--DEEPEPTSKCP 679
            SLCGQ+ RALKLFLQCG++EV+ AI VVGKARNDMLTHTLIDFLMGETDGVPK+P +IYRLY+ALG+Y+QAAKTAIIIA+QEQDLG Y+ AH I++ETIRQL+DQ + VPQSLRR F LLHSYILVKK+++  +HEGAARMLLRVA++IS+FP H VP+LTSTVIE  R+G + SA EYA  LMR EYR  ++  K ++ IE++VR+P    DE  EP S CP
Sbjct:  237 SLCGQYARALKLFLQCGEKEVDRAIEVVGKARNDMLTHTLIDFLMGETDGVPKEPFHIYRLYLALGNYAQAAKTAIIIARQEQDLGKYRQAHSIIYETIRQLQDQKVRVPQSLRRPFTLLHSYILVKKLIKHQNHEGAARMLLRVAKNISKFPNHKVPILTSTVIESFRAGRKQSALEYAKMLMRPEYRQLVEPDKVKKKIESMVRKPKSCTDEAAEPLSPCP 459
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A812W5W2_SYMMI (WDR19 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W5W2_SYMMI)

HSP 1 Score: 301 bits (771), Expect = 9.750e-96
Identity = 147/222 (66.22%), Postives = 181/222 (81.53%), Query Frame = 2 
Query:   20 SLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRR--PNRDEEPEPTSKCP 679
            SLC Q+ RALKLF+QCG +E++AAI VVGK +N+ LTH LIDFL+GE DG+PKDPNYIYRLYMAL  Y  AAKTA II++QEQD+GNY +AHG++ ETIR+LED GI VP  LR +FVLLHSY++VK++V+RGDH GAARMLLRVA S+S+FP H+VP+LTSTV+ECQR+GL+ S++EYA+ LMR EYR  ID   +R IEAIVRR   N D+  E  S CP
Sbjct:  416 SLCAQYQRALKLFIQCGDREIDAAIDVVGKCQNEHLTHQLIDFLVGEKDGIPKDPNYIYRLYMALKKYDDAAKTAAIISRQEQDMGNYSLAHGVVTETIRKLEDDGIRVPSQLRSHFVLLHSYLIVKRLVKRGDHTGAARMLLRVAESVSKFPQHLVPILTSTVVECQRAGLKASSYEYAAMLMRPEYRSNIDTNLKRKIEAIVRRRSANSDDVQEELSPCP 637
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BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Match: A0A1W0A7H3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7H3_9STRA)

HSP 1 Score: 311 bits (797), Expect = 1.210e-94
Identity = 149/219 (68.04%), Postives = 187/219 (85.39%), Query Frame = 2 
Query:   23 LCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRNFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCP 679
            +CG +H+AL+LFLQCG+ E+  AI VVGKARNDMLTHTLIDFLMG+TDG+PKDPNYI+RLYMALG+Y+QAAKTAIIIA+QEQ+LGNYKVAH +L ET RQL    IHV Q LR +  LLHSY++VKK+V+RGDH  AA+ML+RVA+S+S+FPTH+  +L S VIECQR+GL+ S++EYA+TLMR EYR  IDK+ +R IEAIVRRPN+++ P+ T+ CP
Sbjct: 1060 VCGNYHKALRLFLQCGESELGKAIDVVGKARNDMLTHTLIDFLMGDTDGIPKDPNYIFRLYMALGNYAQAAKTAIIIARQEQELGNYKVAHDVLVETHRQLMLHKIHVNQDLRNSLTLLHSYVVVKKLVKRGDHMAAAKMLVRVAKSVSKFPTHVSNILISAVIECQRAGLKGSSYEYATTLMRPEYRNNIDKEIKRKIEAIVRRPNKEQPPDNTTPCP 1278
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18935.5994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE11_9PHAE1.010e-14299.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIK0_ECTSI2.290e-13899.55WD repeat membrane protein n=1 Tax=Ectocarpus sili... [more]
A0A7S2AWF5_9STRA1.280e-10371.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZAW6_9STRA1.770e-10176.71WD repeat membrane protein n=1 Tax=Tribonema minus... [more]
A0A2D4CLP2_PYTIN2.040e-10067.12Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
F0YFC0_AURAN2.320e-9770.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1CDP1_9STRA2.810e-9771.36Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2CHE3_9STRA5.190e-9669.06Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812W5W2_SYMMI9.750e-9666.22WDR19 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A1W0A7H3_9STRA1.210e-9468.04Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18935contigEcto-sp13_S_contig18935:278..2534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size680
Hectar predicted targeting categorymitochondrion
Exons4
Cds size651
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462966.8438776-UTR-Ecto-sp13_S_contig18935:277..3051681462966.8438776-UTR-Ecto-sp13_S_contig18935:277..305Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig18935 278..305 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462966.8541648-CDS-Ecto-sp13_S_contig18935:305..3791681462966.8541648-CDS-Ecto-sp13_S_contig18935:305..379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18935 306..379 -
1681462966.864459-CDS-Ecto-sp13_S_contig18935:952..11351681462966.864459-CDS-Ecto-sp13_S_contig18935:952..1135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18935 953..1135 -
1681462966.874165-CDS-Ecto-sp13_S_contig18935:1638..17461681462966.874165-CDS-Ecto-sp13_S_contig18935:1638..1746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18935 1639..1746 -
1681462966.8837826-CDS-Ecto-sp13_S_contig18935:2248..25341681462966.8837826-CDS-Ecto-sp13_S_contig18935:2248..2534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18935 2249..2534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18935.5994.1prot_Ecto-sp13_S_contig18935.5994.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18935 306..2534 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18935.5994.1

>prot_Ecto-sp13_S_contig18935.5994.1 ID=prot_Ecto-sp13_S_contig18935.5994.1|Name=mRNA_Ecto-sp13_S_contig18935.5994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
VIRPWLKPVRAASPSTQALPSVRQAGGGGRHCRGGQGPQRHADAHPDRLL
DGGNGRGSQGPQLHLPPVHGSGQLLSGCKDGDHHRQARTGLGQLQGGARD
PLRDDPTARGSGDTCPAVPPSKLCAAAQLHLGEKNGPTRGPRGRGPDAVE
GSQEHLAIPDAHRARAYVYRHRVPAVGAEELGVRVRVDAHAAGVPRTNRQ
EVPPQHRGHRSPSEPR*
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mRNA from alignment at Ecto-sp13_S_contig18935:278..2534-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18935.5994.1 ID=mRNA_Ecto-sp13_S_contig18935.5994.1|Name=mRNA_Ecto-sp13_S_contig18935.5994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2257bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18935:278..2534- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTATTCGCCCGTGGCTGAAGCCTGTGCGGGCAGCATCACCGAGCACTCA
AGCTCTTCCTTCAGTGCGGCAAGCAGGAGGTGGAGGCCGCCATTGCCGTG
GTGGGCAAGGCCCGCAACGACATGCTGACGCACACCCTGATCGACTTCTT
GATGGGGGAAACGGACGGGGTTCCCAAGGACCCCAACTACATCTACCGCC
TGTACATGGCTCTGGGCAGCTACTCTCAGGCTGCAAAGACGGCGATCATC
ATCGCCAAGCAAGAACAGGACTTGGGCAACTACAAGGTGGGAGATATGTG
TCTGGTCGTGGAAAATCCCACGGGGTAACTCGTAACCACGTGTGGTGGCA
GCTACGAGAGTGTGCAAGTGTTGGGTAGTTGCGTCAAGATCGGAGGGCGA
TCGTTCTACATATTGTAAAAATTTCACCCCTCCTAAGCAGAAAGAACCCC
CCCGCAGGGGAAGACGACGGCAGCAACGAACAGGGGCAAAGTCGCAGGCG
CAGTCTACGATAGAAGTACTGACATGGGCGCGTCAGGCCTTGGCTCGAAA
AAATAGCCAAGAAACAATGTCTTTCAGTCCAAAGTTTCGAGAAGACGCTT
TTTTGTTGGTTACGCTAGCTGGCGCCGGCGGAGTCGGATTGTCCGTGACA
CCAGGCACTGGAATGTGGCATGTATTTTACACCCGTTTCACAATGGCCAT
CGCCAACTACCCGCGAAGGGGCGCACTATGCACACCTCCGACAGCTGAAC
TCCGCAATGTTTACAACCTTTTCCCGATCCATTTACAGGTGGCGCACGGG
ATCCTCTTCGAGACGATCCGACAGCTAGAGGATCAGGGGATACATGTCCC
GCAGTCCCTCCGTCGAAACTTTGTGCTGCTGCACAGTTACATCTTGGTAG
GTGCCTCGTTCCTTTTCCTGGAACGAACGATGAACTGTCCGAATTTTCCG
GAACTGAAAATATTCTCAAGATGTGTCACCGTGAAAAACGTTTGTGTCGT
GTTATCCAGGACCCTAATCGTCCACCACAAGAACGAAAGGAAAGGGGTCT
CCTGAGCATCGAAAGCTGCTTTCGGAGCGTTTAAAATGCTAGGCGATACT
CACTCCTGCTTTCGCACAGATTTATGGAAAACGACCCACAGCCCACCCGT
CCCACCCGCCCTGAATACACAAGACACGCTACGTACCACAAACTTTCTGC
AGCAAACCGTAGAGGAAATCCCAACCTCCGTTCGCACCAAGCATACCTGT
GGAAGACCAACATACCAGTATTATAGAGGCGACTACACGTCATCCCAAAG
GGCACGCTATGAGCACGGCGAGGAAGCCTCCTCCTCCCCCTCCCGAGAAG
GCAGGATCAATCGATCATCATAACAATACGCGCGTCCTAAACGCCAAAGG
TGAAAAAAATGGTCCGACGAGGGGACCACGAGGGCGCGGCCCGGATGCTG
TTGAGGGTAGCCAGGAGCATCTCGCGATTCCCGACGCACATCGTGCCCGT
GCTTACGTCTACCGTCATCGAGTGCCAGCGGTCGGGGCTGAGGAACTCGG
CGTTCGAGTACGCGTCGACGCTCATGCGGCAGGTGAAAGCGCTGCTGCCG
TTGTACGTGTCGCTGTTGGCATGGTAACGGGTGGGGTGGGGTGGAGTGGG
ATGGGGTGGGGGGCGACGTGAAGCTGGTTTATTTTTTTAAACTGTAGTTC
ATCTCCAAGTTTTTAAGCACGTATCAAATCTAGAGCAGTTTGTTGTGGCA
GCCCGCTCATGATCAACCTGAGATCTGCATCCGACCTTTTGTTTTTCTAC
CGAATGTTGCTTGCCTGTTCAAGAGGGTTTCTCCACGTGTTTTCATAACG
TAGAAAACACAAGCAGTAGAACCACAAGCGCGGAAGACACCATGGTAGTC
GGATGAAATAACGTCAGGTCCAACCTACGACATGGCTGCGCCCTGTAGTT
GCTGTTGCTGTTGCTGTTGCTCTTCTCTTCAAGACCTCTGACTGGAACCT
CCCCTTTTCTTACTTGTCGAGGCAGACGCACGCAAGTGCACAAACGAAAG
AGAGTTCCACCTGTCGCGAAAACATATGGTAAGTCCCTCAAAAGCCAAGC
GCCCCCGTCCCTAACTCTACAATGCCCCCGCTTGTGATCTACGCCCTATC
TCAAGGAGTACCGAGGACAAATCGACAAGAAGTACCGCCGCAACATCGAG
GCCATCGTTCGCCGTCCGAACCGCGATGAAGAGCCCGAGCCGACTTCCAA
GTGCCCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18935:278..2534-

>mRNA_Ecto-sp13_S_contig18935.5994.1 ID=mRNA_Ecto-sp13_S_contig18935.5994.1|Name=mRNA_Ecto-sp13_S_contig18935.5994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=651bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18935:278..2534- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTATTCGCCCGTGGCTGAAGCCTGTGCGGGCAGCATCACCGAGCACTCA
AGCTCTTCCTTCAGTGCGGCAAGCAGGAGGTGGAGGCCGCCATTGCCGTG
GTGGGCAAGGCCCGCAACGACATGCTGACGCACACCCTGATCGACTTCTT
GATGGGGGAAACGGACGGGGTTCCCAAGGACCCCAACTACATCTACCGCC
TGTACATGGCTCTGGGCAGCTACTCTCAGGCTGCAAAGACGGCGATCATC
ATCGCCAAGCAAGAACAGGACTTGGGCAACTACAAGGTGGCGCACGGGAT
CCTCTTCGAGACGATCCGACAGCTAGAGGATCAGGGGATACATGTCCCGC
AGTCCCTCCGTCGAAACTTTGTGCTGCTGCACAGTTACATCTTGGTGAAA
AAAATGGTCCGACGAGGGGACCACGAGGGCGCGGCCCGGATGCTGTTGAG
GGTAGCCAGGAGCATCTCGCGATTCCCGACGCACATCGTGCCCGTGCTTA
CGTCTACCGTCATCGAGTGCCAGCGGTCGGGGCTGAGGAACTCGGCGTTC
GAGTACGCGTCGACGCTCATGCGGCAGGAGTACCGAGGACAAATCGACAA
GAAGTACCGCCGCAACATCGAGGCCATCGTTCGCCGTCCGAACCGCGATG
A
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